FFCP PHASE1:Mm9::chr5:138188113..138188145,+: Difference between revisions
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{{FFCP|EntrezGene=78829|HGNC=|UniProt=E9Q1N9|association_with_transcript=-198bp_to_ENSMUST00000049554_5end|description=CAGE_peak_9_at_Tsc22d4_5end|id=chr5:138188113..138188145,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.68e-13!88;UBERON:0002193!1.04e-09!48;UBERON:0002390!3.40e-09!45;UBERON:0003061!3.40e-09!45;UBERON:0004177!3.91e-09!29;UBERON:0000926!1.20e-07!193;UBERON:0004120!1.20e-07!193;UBERON:0006603!1.20e-07!193;UBERON:0003408!1.21e-07!24;UBERON:0002370!2.16e-07!23;UBERON:0000974!2.16e-07!23;UBERON:0004807!2.16e-07!23;UBERON:0005058!2.16e-07!23;UBERON:0003351!2.16e-07!23;UBERON:0009113!2.16e-07!23;UBERON:0003295!2.16e-07!23;UBERON:0009722!2.16e-07!23;UBERON:0005562!2.16e-07!23;UBERON:0007690!2.16e-07!23;UBERON:0006562!4.61e-07!24;UBERON:0001557!4.61e-07!24;UBERON:0001042!4.61e-07!24;UBERON:0008814!4.61e-07!24;UBERON:0009145!4.61e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.63e-14,48;UBERON:0002405,6.63e-14,48;UBERON:0004177,1.12e-13,29;UBERON:0005057,1.12e-13,29;UBERON:0002390,1.45e-13,45;UBERON:0003061,1.45e-13,45;UBERON:0003408,3.98e-13,24;UBERON:0002370,9.77e-13,23;UBERON:0000974,9.77e-13,23;UBERON:0004807,9.77e-13,23;UBERON:0005058,9.77e-13,23;UBERON:0003351,9.77e-13,23;UBERON:0009113,9.77e-13,23;UBERON:0003295,9.77e-13,23;UBERON:0009722,9.77e-13,23;UBERON:0005562,9.77e-13,23;UBERON:0007690,9.77e-13,23;UBERON:0006562,6.44e-12,24;UBERON:0001557,6.44e-12,24;UBERON:0001042,6.44e-12,24;UBERON:0008814,6.44e-12,24;UBERON:0009145,6.44e-12,24;UBERON:0000077,7.28e-12,35;UBERON:0003081,3.99e-11,87;UBERON:0000926,6.47e-11,120;UBERON:0004120,6.47e-11,120;UBERON:0006603,6.47e-11,120;UBERON:0000072,7.57e-10,27;UBERON:0002368,1.51e-07,60;UBERON:0000490,1.84e-07,66;UBERON:0007811,3.81e-07,36;UBERON:0002530,8.09e-07,65|phase1_expression=0.320297694209588,0.348975407639361,0.909998478779072,0.60492842261366,0.500895729946347,0.16787927191189,0.700837921786577,1.29123323441576,1.97104211012333,2.34064526321993,0.171217968225505,1.11681022593471,1.88320802924326,1.48614684112296,0.999329285446988,1.21485160433896,3.49780939064073,0.946386496074713,0.685572168028694,0,1.02051948181284,0.992909512008853,1.56719873483361,1.27993938234725,0.68822784320151,0,0.430761996159075,0.430942465371778,1.33016393619462,0.504060259519861,0.443461021310609,0,0.61506478758457,0,0,0.831173226792462,0.408338712524738,3.76678467663217,1.5626706890476,2.09409497589519,1.17646297606203,1.36609096991689,3.39857247121808,1.6366586336825,1.11514624341466,0.367093504323363,2.34717403304412,0.872100625521786,1.5378032791413,1.1665793944457,0.55994568650145,0,0.671130424230945,0,0,1.54355661621568,0.85960031981627,2.57836046138721,0,0.528990979272033,0,1.35537812827653,0.889294796111139,3.5995988691256,10.8775299882367,6.3943210345149,1.79760066311043,7.68436610643109,0.311068836925433,0.675029691658453,0,0.285650984403804,0.220868540951614,0.244981598429908,0.287536413054709,0,0,0.383062014255563,0,0.131886287730194,0.365950574409639,0.52091337055676,0,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0.745597783301202,0.302904773332736,0,1.44932244350839,0,0,0,0,0,1.26399978118577,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,1.02765491747154,1.29468941823586,0.445326417194474,1.04091196059682,1.21786191324856,1.84492397804847,0.301445281105245,1.41106448562846,0.502666365318702,0.988779870937496,0.86759614151947,2.65383165584962,0.647067399789637,0.883366073841574,1.45462575940567,1.86391761218122,0,2.30391377494801,3.83185582812887,1.1981512450592,0.599902730993408,0.508280908292259,0,0,0.376963056338593,0,0.255715457330331,0.41557608911912,0,0.407357455401265,1.49288364732112,0.505445516867349,1.05220927943237,0.390361328888111,0,0.360124259610698,0.452114453507145,0.408218994907967,0.384341160854549,0.187403449119458,0.258703370739016,0.431135985865684,0.756424320671277,0.351902248327898,0.657587197282725,0.834141747676794,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0.568326998791185,0.414251545071004,1.40715635988658,0.36012412292203,1.18372367792605,0.590292695242212,0.925602677324269,0.930135779001631,0.804820204198858,0.817357396570186,0.658239399653922,1.47750717671186,2.10778904819225,3.65499968563331,1.53685080703735,1.74468344388483,0.210289948564127,0.205809224758569,1.65209391491899,0.793351699990633,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0.949058123089023,0.329397909448022,0.754005626400808,1.98956472041151,1.9496408711912,0.898819408654221,1.72910439899755,1.99141273254367,1.70701110857774,0.799739588268102,2.25415471346161,0.610953983535943,0.969762435838129,0.561086559122548,0.316182685621286,0.147610147979602,0.156998727841375,0.370191491765402,0,0.667380422864376,0.786235980452812,0.224862112384854,0.405720242777006,0.72353147925725,1.52775511068852,1.43848068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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78829 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E9Q1N9 | |||
|association_with_transcript=-198bp_to_ENSMUST00000049554_5end | |||
|cluster_id=chr5:138188113..138188145,+ | |||
|description=CAGE_peak_9_at_Tsc22d4_5end | |||
|id=chr5:138188113..138188145,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.68e-13!88;UBERON:0002193!1.04e-09!48;UBERON:0002390!3.40e-09!45;UBERON:0003061!3.40e-09!45;UBERON:0004177!3.91e-09!29;UBERON:0000926!1.20e-07!193;UBERON:0004120!1.20e-07!193;UBERON:0006603!1.20e-07!193;UBERON:0003408!1.21e-07!24;UBERON:0002370!2.16e-07!23;UBERON:0000974!2.16e-07!23;UBERON:0004807!2.16e-07!23;UBERON:0005058!2.16e-07!23;UBERON:0003351!2.16e-07!23;UBERON:0009113!2.16e-07!23;UBERON:0003295!2.16e-07!23;UBERON:0009722!2.16e-07!23;UBERON:0005562!2.16e-07!23;UBERON:0007690!2.16e-07!23;UBERON:0006562!4.61e-07!24;UBERON:0001557!4.61e-07!24;UBERON:0001042!4.61e-07!24;UBERON:0008814!4.61e-07!24;UBERON:0009145!4.61e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.63e-14,48;UBERON:0002405,6.63e-14,48;UBERON:0004177,1.12e-13,29;UBERON:0005057,1.12e-13,29;UBERON:0002390,1.45e-13,45;UBERON:0003061,1.45e-13,45;UBERON:0003408,3.98e-13,24;UBERON:0002370,9.77e-13,23;UBERON:0000974,9.77e-13,23;UBERON:0004807,9.77e-13,23;UBERON:0005058,9.77e-13,23;UBERON:0003351,9.77e-13,23;UBERON:0009113,9.77e-13,23;UBERON:0003295,9.77e-13,23;UBERON:0009722,9.77e-13,23;UBERON:0005562,9.77e-13,23;UBERON:0007690,9.77e-13,23;UBERON:0006562,6.44e-12,24;UBERON:0001557,6.44e-12,24;UBERON:0001042,6.44e-12,24;UBERON:0008814,6.44e-12,24;UBERON:0009145,6.44e-12,24;UBERON:0000077,7.28e-12,35;UBERON:0003081,3.99e-11,87;UBERON:0000926,6.47e-11,120;UBERON:0004120,6.47e-11,120;UBERON:0006603,6.47e-11,120;UBERON:0000072,7.57e-10,27;UBERON:0002368,1.51e-07,60;UBERON:0000490,1.84e-07,66;UBERON:0007811,3.81e-07,36;UBERON:0002530,8.09e-07,65 | |||
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| |||
|short_description=p9@Tsc22d4 | |||
}} |
Latest revision as of 15:01, 25 September 2015
Short description: | p9@Tsc22d4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Tsc22d4_5end |
Coexpression cluster: | NA |
Association with transcript: | -198bp_to_ENSMUST00000049554_5end |
EntrezGene: | Tsc22d4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.63e-14 | 48 |
immune system | 6.63e-14 | 48 |
hemopoietic organ | 1.12e-13 | 29 |
immune organ | 1.12e-13 | 29 |
hematopoietic system | 1.45e-13 | 45 |
blood island | 1.45e-13 | 45 |
gland of gut | 3.98e-13 | 24 |
thymus | 9.77e-13 | 23 |
neck | 9.77e-13 | 23 |
respiratory system epithelium | 9.77e-13 | 23 |
hemolymphoid system gland | 9.77e-13 | 23 |
pharyngeal epithelium | 9.77e-13 | 23 |
thymic region | 9.77e-13 | 23 |
pharyngeal gland | 9.77e-13 | 23 |
entire pharyngeal arch endoderm | 9.77e-13 | 23 |
thymus primordium | 9.77e-13 | 23 |
early pharyngeal endoderm | 9.77e-13 | 23 |
pharynx | 6.44e-12 | 24 |
upper respiratory tract | 6.44e-12 | 24 |
chordate pharynx | 6.44e-12 | 24 |
pharyngeal arch system | 6.44e-12 | 24 |
pharyngeal region of foregut | 6.44e-12 | 24 |
mixed endoderm/mesoderm-derived structure | 7.28e-12 | 35 |
lateral plate mesoderm | 3.99e-11 | 87 |
mesoderm | 6.47e-11 | 120 |
mesoderm-derived structure | 6.47e-11 | 120 |
presumptive mesoderm | 6.47e-11 | 120 |
segment of respiratory tract | 7.57e-10 | 27 |
endocrine gland | 1.51e-07 | 60 |
unilaminar epithelium | 1.84e-07 | 66 |
craniocervical region | 3.81e-07 | 36 |
gland | 8.09e-07 | 65 |