Personal tools

FFCP PHASE1:Mm9::chr3:61168714..61168729,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74012
|EntrezGene=74012
|HGNC=
|HGNC=
|MCL_coexpression_id=67
|TSSclassifier=NA
|UniProt=P61226,Q6ZWR0
|UniProt=P61226,Q6ZWR0
|association_with_transcript=285bp_to_ENSMUST00000049064,NM_028712,uc008pjl.1_5end
|association_with_transcript=285bp_to_ENSMUST00000049064,NM_028712,uc008pjl.1_5end
|cluster_id=chr3:61168714..61168729,+
|description=CAGE_peak_3_at_Rap2b_5end
|description=CAGE_peak_3_at_Rap2b_5end
|id=chr3:61168714..61168729,+
|id=chr3:61168714..61168729,+
|ontology_enrichment_celltype=CL:0000548!3.01e-11!115;CL:0000004!3.01e-11!115;CL:0000255!3.01e-11!115;CL:0000144!5.86e-11!121;CL:0000012!5.86e-11!121;CL:0002371!7.49e-11!118;CL:0002321!5.29e-07!70;CL:0000220!5.29e-07!70
|ontology_enrichment_celltype=CL:0000548!3.01e-11!115;CL:0000004!3.01e-11!115;CL:0000255!3.01e-11!115;CL:0000144!5.86e-11!121;CL:0000012!5.86e-11!121;CL:0002371!7.49e-11!118;CL:0002321!5.29e-07!70;CL:0000220!5.29e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000473,2.45e-11,7;CL:0000222,4.29e-11,7;CL:0002194,7.22e-10,4;CL:0000766,7.22e-10,4;CL:0000234,7.22e-10,4;CL:0000576,7.22e-10,4;CL:0000235,7.22e-10,4;CL:0000864,7.22e-10,4;CL:0002009,7.22e-10,4;CL:0000040,7.22e-10,4;CL:0000559,7.22e-10,4;CL:0000680,4.43e-09,6;CL:0000187,4.43e-09,6;CL:0000056,4.43e-09,6;CL:0000068,1.43e-08,3;CL:0002202,1.43e-08,3;CL:0000069,1.43e-08,3;CL:0002632,1.43e-08,3;CL:0002368,1.43e-08,3;CL:0000307,1.43e-08,3;CL:0000377,1.43e-08,3;CL:0002092,1.89e-08,3;CL:0002540,1.89e-08,3;CL:0000557,4.53e-08,7;CL:0002494,1.24e-07,3;CL:0000737,1.24e-07,3;CL:0000746,1.24e-07,3;CL:0000513,1.24e-07,3;CL:0002321,2.40e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.50e-10!75;UBERON:0001016!3.50e-10!75;UBERON:0001017!2.99e-09!73;UBERON:0005743!2.99e-09!73;UBERON:0004121!8.55e-08!102;UBERON:0000924!8.55e-08!102;UBERON:0006601!8.55e-08!102;UBERON:0002021!1.31e-07!10;UBERON:0000411!1.31e-07!10;UBERON:0001950!1.31e-07!10;UBERON:0000955!4.12e-07!50;UBERON:0006238!4.12e-07!50;UBERON:0003080!4.50e-07!40;UBERON:0002616!6.86e-07!49;UBERON:0002780!9.01e-07!39;UBERON:0001890!9.01e-07!39;UBERON:0006240!9.01e-07!39
|ontology_enrichment_uberon=UBERON:0000073!3.50e-10!75;UBERON:0001016!3.50e-10!75;UBERON:0001017!2.99e-09!73;UBERON:0005743!2.99e-09!73;UBERON:0004121!8.55e-08!102;UBERON:0000924!8.55e-08!102;UBERON:0006601!8.55e-08!102;UBERON:0002021!1.31e-07!10;UBERON:0000411!1.31e-07!10;UBERON:0001950!1.31e-07!10;UBERON:0000955!4.12e-07!50;UBERON:0006238!4.12e-07!50;UBERON:0003080!4.50e-07!40;UBERON:0002616!6.86e-07!49;UBERON:0002780!9.01e-07!39;UBERON:0001890!9.01e-07!39;UBERON:0006240!9.01e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.61e-14,10;UBERON:0000411,3.61e-14,10;UBERON:0001950,3.61e-14,10;UBERON:0002619,1.32e-09,17;UBERON:0002204,1.58e-09,32;UBERON:0003126,1.43e-08,3;UBERON:0001005,1.43e-08,3;UBERON:0007196,1.43e-08,3;UBERON:0001558,1.43e-08,3;UBERON:0002371,2.06e-08,16;UBERON:0000956,1.87e-07,21;UBERON:0001869,1.87e-07,21;UBERON:0000203,1.87e-07,21
|phase1_expression=0,0.697950815278722,1.36499771816861,0.30246421130683,0,0.16787927191189,0.233612640595526,0.387369970324729,0.422366166455,0.70219357896598,0.171217968225505,0,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0,0.198581902401771,0.261199789138935,0.319984845586813,0.22940928106717,1.14846392823004,1.29228598847722,0.646413698057667,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0.418531630736908,0,0,0,1.36609096991689,0,1.25896817975577,1.01376931219515,0.550640256485045,0,0.872100625521786,0.219686182734472,0.972149495371417,0.279972843250725,0,0,0,0.672187598284928,3.08711323243136,1.43266719969378,2.06268836910977,0.202316460859598,0,0,3.38844532069132,0.889294796111139,4.04954872776629,5.93319817540185,2.8419204597844,1.19840044207362,1.15265491596466,0,0,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0,1.10115880999389,0.638436690425939,0.921639199537461,0.527545150920775,0.182975287204819,0,0.837548997004143,1.12552522006336,0.15279824777681,0,0.427115042397309,0,0.832988126665025,4.00529268565963,2.6087803983151,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,5.19578498426914,3.80039798212648,5.56076889516262,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0.381210681219194,0.449371918214468,0,0.125654352112864,0.695297280769106,1.79000820131231,0.83115217823824,0.486723789203273,0.101839363850316,0,0,0,0,0.229902104433473,0.720248519221397,0.452114453507145,0.408218994907967,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,1.02939162845886,0.568326998791185,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,1.05144974282064,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,7.53956419696361,7.07077388964322,0,0,0.160550589987792,0,0,0,0.631016438832513,0,0.430846795465598,0.716906393857656,1.11399337041197,1.41538265394416,0.404810701674894,0.292255857911312,1.97643888973262,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.643011105094777,0.177340233642274,0.535106452806212,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.241251699712623,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0,0,0,0,0.457556346413045,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.388844919875379,0,0,0.299033092087958,0,0,0,0.168956125490778,0.469428954583016,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.226730383615211,0.221985953374065,0.358855426437903,1.00730769818447,0,0.375364950902364,0,0.214368379079066,0,3.3885110557024,2.30162618253588,0.572895513439397,2.23409137046794,2.74033007908257,1.5107877947794,0.675022500231806,2.2516060161211,3.17199686288943,1.55328093525546,0.103787347584177,0.798049746802062,0,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0,0
|phase1_expression=0,0.697950815278722,1.36499771816861,0.30246421130683,0,0.16787927191189,0.233612640595526,0.387369970324729,0.422366166455,0.70219357896598,0.171217968225505,0,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0,0.198581902401771,0.261199789138935,0.319984845586813,0.22940928106717,1.14846392823004,1.29228598847722,0.646413698057667,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0.418531630736908,0,0,0,1.36609096991689,0,1.25896817975577,1.01376931219515,0.550640256485045,0,0.872100625521786,0.219686182734472,0.972149495371417,0.279972843250725,0,0,0,0.672187598284928,3.08711323243136,1.43266719969378,2.06268836910977,0.202316460859598,0,0,3.38844532069132,0.889294796111139,4.04954872776629,5.93319817540185,2.8419204597844,1.19840044207362,1.15265491596466,0,0,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0,1.10115880999389,0.638436690425939,0.921639199537461,0.527545150920775,0.182975287204819,0,0.837548997004143,1.12552522006336,0.15279824777681,0,0.427115042397309,0,0.832988126665025,4.00529268565963,2.6087803983151,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,5.19578498426914,3.80039798212648,5.56076889516262,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0.381210681219194,0.449371918214468,0,0.125654352112864,0.695297280769106,1.79000820131231,0.83115217823824,0.486723789203273,0.101839363850316,0,0,0,0,0.229902104433473,0.720248519221397,0.452114453507145,0.408218994907967,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,1.02939162845886,0.568326998791185,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,1.05144974282064,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,7.53956419696361,7.07077388964322,0,0,0.160550589987792,0,0,0,0.631016438832513,0,0.430846795465598,0.716906393857656,1.11399337041197,1.41538265394416,0.404810701674894,0.292255857911312,1.97643888973262,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.643011105094777,0.177340233642274,0.535106452806212,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.241251699712623,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0,0,0,0,0.457556346413045,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.388844919875379,0,0,0.299033092087958,0,0,0,0.168956125490778,0.469428954583016,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.226730383615211,0.221985953374065,0.358855426437903,1.00730769818447,0,0.375364950902364,0,0.214368379079066,0,3.3885110557024,2.30162618253588,0.572895513439397,2.23409137046794,2.74033007908257,1.5107877947794,0.675022500231806,2.2516060161211,3.17199686288943,1.55328093525546,0.103787347584177,0.798049746802062,0,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0,0
|short_description=p3@Rap2b
|short_description=p3@Rap2b
}}
}}

Latest revision as of 15:33, 25 September 2015

Short description:p3@Rap2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rap2b_5end
Coexpression cluster:MCL_coexpression_mm9:67
Association with transcript: 285bp_to_ENSMUST00000049064, NM_028712, uc008pjl.1_5end
EntrezGene:Rap2b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rap2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F94.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
defensive cell2.45e-117
mesodermal cell4.29e-117
monopoietic cell7.22e-104
myeloid leukocyte7.22e-104
phagocyte7.22e-104
monocyte7.22e-104
macrophage7.22e-104
tissue-resident macrophage7.22e-104
macrophage dendritic cell progenitor7.22e-104
monoblast7.22e-104
promonocyte7.22e-104
muscle precursor cell4.43e-096
muscle cell4.43e-096
myoblast4.43e-096
duct epithelial cell1.43e-083
epithelial cell of tracheobronchial tree1.43e-083
branched duct epithelial cell1.43e-083
epithelial cell of lower respiratory tract1.43e-083
respiratory epithelial cell1.43e-083
tracheal epithelial cell1.43e-083
tracheoblast1.43e-083
bone marrow cell1.89e-083
mesenchymal stem cell of the bone marrow1.89e-083
granulocyte monocyte progenitor cell4.53e-087
cardiocyte1.24e-073
striated muscle cell1.24e-073
cardiac muscle cell1.24e-073
cardiac muscle myoblast1.24e-073
embryonic cell2.40e-0770

Uber anatomy
Ontology termp-valuen
occipital lobe3.61e-1410
visual cortex3.61e-1410
neocortex3.61e-1410
regional part of cerebral cortex1.32e-0917
musculoskeletal system1.58e-0932
trachea1.43e-083
respiratory airway1.43e-083
tracheobronchial tree1.43e-083
lower respiratory tract1.43e-083
bone marrow2.06e-0816
cerebral cortex1.87e-0721
cerebral hemisphere1.87e-0721
pallium1.87e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:61168714..61168729,%2B&oldid=4199515"