FFCP PHASE2:Mm9::chr5:139605827..139605834,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:19085 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:P12849 |association_with_transcript=-114bp_t...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=19085 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P12849 | ||
|association_with_transcript=-114bp_to_ENSMUST00000026973_5end | |association_with_transcript=-114bp_to_ENSMUST00000026973_5end | ||
|cluster_id=chr5:139605827..139605834,- | |cluster_id=chr5:139605827..139605834,- | ||
Latest revision as of 15:42, 25 September 2015
| Short description: | p6@Prkar1b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Prkar1b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | -114bp_to_ENSMUST00000026973_5end |
| EntrezGene: | Prkar1b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@Prkar1b |
|---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.87e-12 | 23 |
| neuroblast (sensu Vertebrata) | 2.87e-12 | 23 |
| raphe nuclei neuron | 2.45e-09 | 3 |
| neuron of the substantia nigra | 2.45e-09 | 3 |
| neuron | 6.59e-08 | 33 |
| neuronal stem cell | 6.59e-08 | 33 |
| neuroblast | 6.59e-08 | 33 |
| electrically signaling cell | 6.59e-08 | 33 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 1.00e-37 | 54 |
| neural tube | 2.26e-33 | 52 |
| neural rod | 2.26e-33 | 52 |
| future spinal cord | 2.26e-33 | 52 |
| neural keel | 2.26e-33 | 52 |
| central nervous system | 2.98e-33 | 73 |
| nervous system | 3.29e-32 | 75 |
| brain | 5.96e-32 | 47 |
| future brain | 5.96e-32 | 47 |
| regional part of brain | 8.20e-30 | 46 |
Showing 1 to 10 of 64 entries
