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FFCP PHASE1:Mm9::chr11:74537331..74537362,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18472
|EntrezGene=18472
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P63005,Q5SW18
|UniProt=P63005,Q5SW18
|association_with_transcript=0bp_to_ENSMUST00000102520,NR_037610,uc007kce.2_5end
|association_with_transcript=0bp_to_ENSMUST00000102520,NR_037610,uc007kce.2_5end
|cluster_id=chr11:74537331..74537362,-
|description=CAGE_peak_4_at_Pafah1b1_5end
|description=CAGE_peak_4_at_Pafah1b1_5end
|id=chr11:74537331..74537362,-
|id=chr11:74537331..74537362,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.14e-13!52;UBERON:0005068!1.14e-13!52;UBERON:0006241!1.14e-13!52;UBERON:0007135!1.14e-13!52;UBERON:0000955!1.77e-12!50;UBERON:0006238!1.77e-12!50;UBERON:0001017!3.31e-12!73;UBERON:0005743!3.31e-12!73;UBERON:0002616!5.24e-12!49;UBERON:0000073!9.64e-12!75;UBERON:0001016!9.64e-12!75;UBERON:0004111!1.92e-11!122;UBERON:0002020!2.13e-11!34;UBERON:0002346!2.14e-11!71;UBERON:0003075!2.14e-11!71;UBERON:0007284!2.14e-11!71;UBERON:0000025!5.67e-11!114;UBERON:0000033!1.21e-10!63;UBERON:0004121!3.85e-10!102;UBERON:0000924!3.85e-10!102;UBERON:0006601!3.85e-10!102;UBERON:0003080!7.31e-09!40;UBERON:0002791!1.02e-08!29;UBERON:0003528!1.02e-08!29;UBERON:0001893!1.02e-08!29;UBERON:0002780!2.05e-08!39;UBERON:0001890!2.05e-08!39;UBERON:0006240!2.05e-08!39;UBERON:0002021!6.42e-08!10;UBERON:0000411!6.42e-08!10;UBERON:0001950!6.42e-08!10;UBERON:0003056!4.38e-07!49;UBERON:0002619!6.54e-07!17
|ontology_enrichment_uberon=UBERON:0001049!1.14e-13!52;UBERON:0005068!1.14e-13!52;UBERON:0006241!1.14e-13!52;UBERON:0007135!1.14e-13!52;UBERON:0000955!1.77e-12!50;UBERON:0006238!1.77e-12!50;UBERON:0001017!3.31e-12!73;UBERON:0005743!3.31e-12!73;UBERON:0002616!5.24e-12!49;UBERON:0000073!9.64e-12!75;UBERON:0001016!9.64e-12!75;UBERON:0004111!1.92e-11!122;UBERON:0002020!2.13e-11!34;UBERON:0002346!2.14e-11!71;UBERON:0003075!2.14e-11!71;UBERON:0007284!2.14e-11!71;UBERON:0000025!5.67e-11!114;UBERON:0000033!1.21e-10!63;UBERON:0004121!3.85e-10!102;UBERON:0000924!3.85e-10!102;UBERON:0006601!3.85e-10!102;UBERON:0003080!7.31e-09!40;UBERON:0002791!1.02e-08!29;UBERON:0003528!1.02e-08!29;UBERON:0001893!1.02e-08!29;UBERON:0002780!2.05e-08!39;UBERON:0001890!2.05e-08!39;UBERON:0006240!2.05e-08!39;UBERON:0002021!6.42e-08!10;UBERON:0000411!6.42e-08!10;UBERON:0001950!6.42e-08!10;UBERON:0003056!4.38e-07!49;UBERON:0002619!6.54e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.34e-15,92;UBERON:0000073,1.11e-14,54;UBERON:0001049,1.28e-13,52;UBERON:0005068,1.28e-13,52;UBERON:0006241,1.28e-13,52;UBERON:0007135,1.28e-13,52;UBERON:0001017,4.05e-12,73;UBERON:0001016,1.17e-11,75;UBERON:0004111,1.86e-11,122;UBERON:0002020,2.43e-11,34;UBERON:0000025,5.52e-11,114;UBERON:0000955,6.32e-11,47;UBERON:0006238,6.32e-11,47;UBERON:0002346,1.18e-10,64;UBERON:0003075,1.18e-10,64;UBERON:0007284,1.18e-10,64;UBERON:0002616,1.80e-10,46;UBERON:0010371,4.49e-10,73;UBERON:0004121,2.91e-09,95;UBERON:0000924,2.91e-09,95;UBERON:0006601,2.91e-09,95;UBERON:0003080,8.14e-09,40;UBERON:0003528,1.16e-08,29;UBERON:0002791,1.16e-08,29;UBERON:0001893,1.16e-08,29;UBERON:0002780,2.28e-08,39;UBERON:0001890,2.28e-08,39;UBERON:0006240,2.28e-08,39;UBERON:0002021,6.32e-08,10;UBERON:0000411,6.32e-08,10;UBERON:0001950,6.32e-08,10;UBERON:0003056,4.78e-07,49;UBERON:0002619,7.58e-07,17
|phase1_expression=4.64431656603902,6.97950815278722,8.18998630901165,5.14189159221611,6.51164448930251,3.3575854382378,3.97141489012394,1.67860320474049,1.12630977721333,1.63845168425395,0.856089841127525,0.717949430958028,1.19840510951844,1.48614684112296,0.333109761815663,1.41732687172878,0,0.946386496074713,0.959801035240171,1.27316895539409,11.3107575900923,1.88652807281682,0.783599367416806,5.27974995218242,4.12936705920906,4.01962374880514,4.73838195774982,3.66301095566011,5.32065574477847,3.52842181663903,2.66076612786366,2.54012269383853,0.61506478758457,0,3.17736781726402,1.66234645358492,2.45003227514843,2.92972141515835,1.5626706890476,1.0470474879476,5.29408339227913,3.41522742479223,2.42755176515577,5.91715044485213,3.4468156614635,5.32285581268876,3.9119567217402,2.61630187656536,4.39372365468944,5.05517737593137,3.07970127575798,4.31257693094915,0.167782606057736,3.62681071005672,0.336093799142464,3.8588915405392,8.88253663810146,9.7977697532714,3.23706337375356,4.23192783417626,1.90149421051854,4.40497891689872,2.66788438833342,2.2497492932035,3.9554654502679,0.7104801149461,0.898800331555214,2.30530983192933,2.17748185847803,1.89008313664367,2.52389953621658,16.5677570954206,11.2642955885323,2.44981598429908,2.49198224647415,0.919218786610021,7.70811166995721,14.0456071893706,11.8277030607307,4.3522474950964,5.12330804173494,3.12548022334056,11.725685958058,6.19038871034848,10.3902808488231,15.0260578591571,19.7896636310753,7.26957838718672,1.81742863999642,3.02286240427142,1.15945795480671,4.30211938490693,2.03991400112325,2.69851595818909,5.19821133958135,6.72040330646003,4.21333260395256,1.1930122580464,2.59786004602869,2.12003744706204,4.92951969218382,2.56652954828636,7.64415719119937,0,1.94841936910093,0.506719730950197,1.01104889002957,4.90990682791958,0.258937883647172,3.71105347662062,1.90833859442749,3.04465478312141,4.38169444786511,3.76806601381556,4.58595957829249,7.03732911446183,1.97755974187499,12.4355446951124,0.884610551949874,2.26473589926373,2.87093973998512,1.45462575940567,3.72783522436244,4.68449275218475,10.8912287542997,2.29911349687732,2.03685711660064,1.19980546198682,1.52484272487678,10.0359728401231,14.1825186873774,6.28271760564322,22.2495129846114,30.4301394223093,13.5062228963714,18.3332627266566,2.85150218780886,3.4833951770826,3.28539585963777,6.94458124425364,1.56144531555244,2.5289231487682,1.62055916824814,2.41127708537144,2.17716797284249,1.66547836370305,2.15513966487376,5.43277078551933,0.646703978798527,0.945530400839096,1.58356011747554,1.31517439456545,2.50242524303038,2.78601733217733,1.4404749548556,3.18454826909589,0.702213187313235,0.772043721344145,2.55747149456033,1.86413195281952,2.57978665979206,3.42117916775928,3.55117103377815,2.55793501271625,3.85667782218446,4.41814495025775,4.29237442239391,8.05680862333469,6.91151369636618,6.895033491322,5.6748166682099,5.26319954731196,3.95190207523891,6.30770168173747,18.0849355765149,9.36431972651488,3.63460661282178,6.87571473325215,1.49301775374664,1.85789337488351,1.15980715189884,1.61346819698674,2.2237804384487,1.71203063501303,3.32170343081158,1.31759163779209,1.50801125280162,2.38747766449381,3.11942539390592,1.79763881730844,4.10662294761919,3.58454291857861,1.70701110857774,1.37098215131675,0,2.64746726198909,2.71533482034676,2.10407459670956,2.65593455921881,5.16635517928608,3.92496819603437,4.07210640941942,3.26097889795864,1.00107063429656,1.37591296579242,1.34917267430912,1.01430060694251,1.92941727801933,1.78238096246994,0.287696137450811,2.10775794807546,0.549122826376163,4.31304619582064,4.46569137202204,3.12037673114561,3.53610429125956,3.40855085691633,5.30687873499704,2.77129785249907,2.4633883530163,1.46668478797823,1.86719594352707,2.11221223459652,2.51259386162724,1.90434912708811,2.53673742215138,1.10344600874334,2.43611158613652,2.07291199254733,2.13022309130459,3.45369963731791,3.7608755231193,0,0.54390568381871,2.45882136509518,1.10374698521893,11.3990918891332,15.2375192569864,1.80328439914343,2.27223834483936,2.52406575533005,2.73307121007647,1.72338718186239,2.15071918157297,2.89638276307112,1.98153571552183,2.42886421004937,2.04579100537918,3.16230222357219,8.35435422696698,4.11626247103979,2.49291845134157,2.44330439030364,1.97964147567043,0,0.728341908464944,3.62788268357701,1.69744571780308,1.47650946440386,2.15204603560749,2.32585463851399,1.09060118843252,2.49548164869305,2.84433082142234,2.10837217149998,1.03135543248187,2.38307724027652,1.62054984628179,1.94038025674132,3.64372959553707,5.85222771019503,3.21063871683727,5.75921572107423,1.522324745573,3.75474732901937,2.33015277950202,4.41056796109924,3.2977250588296,2.26050197374268,2.89502039655148,3.22305328808468,2.9545361954111,4.37221254944776,10.7546675166096,0.854354403989263,1.857481811669,1.66675074632741,0.941842285023455,1.0935538217682,1.83022538565218,2.71965487990169,1.39951452323658,3.45499934511059,4.77335309007557,0.949007980743406,2.23651413839534,2.05210147561422,2.09088296014469,3.057075892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|phase1_expression=4.64431656603902,6.97950815278722,8.18998630901165,5.14189159221611,6.51164448930251,3.3575854382378,3.97141489012394,1.67860320474049,1.12630977721333,1.63845168425395,0.856089841127525,0.717949430958028,1.19840510951844,1.48614684112296,0.333109761815663,1.41732687172878,0,0.946386496074713,0.959801035240171,1.27316895539409,11.3107575900923,1.88652807281682,0.783599367416806,5.27974995218242,4.12936705920906,4.01962374880514,4.73838195774982,3.66301095566011,5.32065574477847,3.52842181663903,2.66076612786366,2.54012269383853,0.61506478758457,0,3.17736781726402,1.66234645358492,2.45003227514843,2.92972141515835,1.5626706890476,1.0470474879476,5.29408339227913,3.41522742479223,2.42755176515577,5.91715044485213,3.4468156614635,5.32285581268876,3.9119567217402,2.61630187656536,4.39372365468944,5.05517737593137,3.07970127575798,4.31257693094915,0.167782606057736,3.62681071005672,0.336093799142464,3.8588915405392,8.88253663810146,9.7977697532714,3.23706337375356,4.23192783417626,1.90149421051854,4.40497891689872,2.66788438833342,2.2497492932035,3.9554654502679,0.7104801149461,0.898800331555214,2.30530983192933,2.17748185847803,1.89008313664367,2.52389953621658,16.5677570954206,11.2642955885323,2.44981598429908,2.49198224647415,0.919218786610021,7.70811166995721,14.0456071893706,11.8277030607307,4.3522474950964,5.12330804173494,3.12548022334056,11.725685958058,6.19038871034848,10.3902808488231,15.0260578591571,19.7896636310753,7.26957838718672,1.81742863999642,3.02286240427142,1.15945795480671,4.30211938490693,2.03991400112325,2.69851595818909,5.19821133958135,6.72040330646003,4.21333260395256,1.1930122580464,2.59786004602869,2.12003744706204,4.92951969218382,2.56652954828636,7.64415719119937,0,1.94841936910093,0.506719730950197,1.01104889002957,4.90990682791958,0.258937883647172,3.71105347662062,1.90833859442749,3.04465478312141,4.38169444786511,3.76806601381556,4.58595957829249,7.03732911446183,1.97755974187499,12.4355446951124,0.884610551949874,2.26473589926373,2.87093973998512,1.45462575940567,3.72783522436244,4.68449275218475,10.8912287542997,2.29911349687732,2.03685711660064,1.19980546198682,1.52484272487678,10.0359728401231,14.1825186873774,6.28271760564322,22.2495129846114,30.4301394223093,13.5062228963714,18.3332627266566,2.85150218780886,3.4833951770826,3.28539585963777,6.94458124425364,1.56144531555244,2.5289231487682,1.62055916824814,2.41127708537144,2.17716797284249,1.66547836370305,2.15513966487376,5.43277078551933,0.646703978798527,0.945530400839096,1.58356011747554,1.31517439456545,2.50242524303038,2.78601733217733,1.4404749548556,3.18454826909589,0.702213187313235,0.772043721344145,2.55747149456033,1.86413195281952,2.57978665979206,3.42117916775928,3.55117103377815,2.55793501271625,3.85667782218446,4.41814495025775,4.29237442239391,8.05680862333469,6.91151369636618,6.895033491322,5.6748166682099,5.26319954731196,3.95190207523891,6.30770168173747,18.0849355765149,9.36431972651488,3.63460661282178,6.87571473325215,1.49301775374664,1.85789337488351,1.15980715189884,1.61346819698674,2.2237804384487,1.71203063501303,3.32170343081158,1.31759163779209,1.50801125280162,2.38747766449381,3.11942539390592,1.79763881730844,4.10662294761919,3.58454291857861,1.70701110857774,1.37098215131675,0,2.64746726198909,2.71533482034676,2.10407459670956,2.65593455921881,5.16635517928608,3.92496819603437,4.07210640941942,3.26097889795864,1.00107063429656,1.37591296579242,1.34917267430912,1.01430060694251,1.92941727801933,1.78238096246994,0.287696137450811,2.10775794807546,0.549122826376163,4.31304619582064,4.46569137202204,3.12037673114561,3.53610429125956,3.40855085691633,5.30687873499704,2.77129785249907,2.4633883530163,1.46668478797823,1.86719594352707,2.11221223459652,2.51259386162724,1.90434912708811,2.53673742215138,1.10344600874334,2.43611158613652,2.07291199254733,2.13022309130459,3.45369963731791,3.7608755231193,0,0.54390568381871,2.45882136509518,1.10374698521893,11.3990918891332,15.2375192569864,1.80328439914343,2.27223834483936,2.52406575533005,2.73307121007647,1.72338718186239,2.15071918157297,2.89638276307112,1.98153571552183,2.42886421004937,2.04579100537918,3.16230222357219,8.35435422696698,4.11626247103979,2.49291845134157,2.44330439030364,1.97964147567043,0,0.728341908464944,3.62788268357701,1.69744571780308,1.47650946440386,2.15204603560749,2.32585463851399,1.09060118843252,2.49548164869305,2.84433082142234,2.10837217149998,1.03135543248187,2.38307724027652,1.62054984628179,1.94038025674132,3.64372959553707,5.85222771019503,3.21063871683727,5.75921572107423,1.522324745573,3.75474732901937,2.33015277950202,4.41056796109924,3.2977250588296,2.26050197374268,2.89502039655148,3.22305328808468,2.9545361954111,4.37221254944776,10.7546675166096,0.854354403989263,1.857481811669,1.66675074632741,0.941842285023455,1.0935538217682,1.83022538565218,2.71965487990169,1.39951452323658,3.45499934511059,4.77335309007557,0.949007980743406,2.23651413839534,2.05210147561422,2.09088296014469,3.057075892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|short_description=p4@Pafah1b1
|short_description=p4@Pafah1b1
}}
}}

Latest revision as of 15:53, 25 September 2015

Short description:p4@Pafah1b1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pafah1b1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000102520, NR_037610, uc007kce.2_5end
EntrezGene:Pafah1b1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Pafah1b1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I23.66
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H112.44
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A410.04
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F16.28
cortex, adult.CNhs10473.12-14D522.25
cortex, neonate N30.CNhs11107.1392-42F230.43
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B218.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E38.06
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G16.90
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D26.31
hippocampus, adult.CNhs10478.13-16E818.08
hippocampus, neonate N00.CNhs11228.627-43G19.36
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D52.66
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A315.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D94.09
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E210.66
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.37
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.34e-1592
regional part of nervous system1.11e-1454
neural tube1.28e-1352
neural rod1.28e-1352
future spinal cord1.28e-1352
neural keel1.28e-1352
central nervous system4.05e-1273
nervous system1.17e-1175
anatomical conduit1.86e-11122
gray matter2.43e-1134
tube5.52e-11114
brain6.32e-1147
future brain6.32e-1147
neurectoderm1.18e-1064
neural plate1.18e-1064
presumptive neural plate1.18e-1064
regional part of brain1.80e-1046
ecto-epithelium4.49e-1073
ectoderm-derived structure2.91e-0995
ectoderm2.91e-0995
presumptive ectoderm2.91e-0995
anterior neural tube8.14e-0940
brain grey matter1.16e-0829
regional part of telencephalon1.16e-0829
telencephalon1.16e-0829
regional part of forebrain2.28e-0839
forebrain2.28e-0839
future forebrain2.28e-0839
occipital lobe6.32e-0810
visual cortex6.32e-0810
neocortex6.32e-0810
pre-chordal neural plate4.78e-0749
regional part of cerebral cortex7.58e-0717
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