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FFCP PHASE1:Mm9::chr3:68820009..68820030,+: Difference between revisions

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{{FFCP|EntrezGene=70099|HGNC=|MCL_coexpression_id=82|UniProt=|association_with_transcript=-381bp_to_ENSMUST00000128134_5end|description=CAGE_peak_3_at_Smc4_5end|id=chr3:68820009..68820030,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!4.36e-11!147;UBERON:0000926!7.24e-10!193;UBERON:0004120!7.24e-10!193;UBERON:0006603!7.24e-10!193;UBERON:0004177!2.53e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.96e-12,134;UBERON:0004177,3.14e-11,29;UBERON:0005057,3.14e-11,29;UBERON:0001041,1.69e-08,80;UBERON:0000077,2.54e-08,35;UBERON:0000926,4.97e-08,120;UBERON:0004120,4.97e-08,120;UBERON:0006603,4.97e-08,120;UBERON:0003081,8.40e-08,87;UBERON:0002370,1.17e-07,23;UBERON:0000974,1.17e-07,23;UBERON:0004807,1.17e-07,23;UBERON:0005058,1.17e-07,23;UBERON:0003351,1.17e-07,23;UBERON:0009113,1.17e-07,23;UBERON:0003295,1.17e-07,23;UBERON:0009722,1.17e-07,23;UBERON:0005562,1.17e-07,23;UBERON:0007690,1.17e-07,23;UBERON:0002390,1.55e-07,45;UBERON:0003061,1.55e-07,45;UBERON:0006562,3.54e-07,24;UBERON:0003408,3.54e-07,24;UBERON:0001557,3.54e-07,24;UBERON:0001042,3.54e-07,24;UBERON:0008814,3.54e-07,24;UBERON:0009145,3.54e-07,24;UBERON:0000065,8.01e-07,41|phase1_expression=0,0,0,0,0,0,0.467225281191051,0.903863264091034,0.422366166455,0,0,0.319088635981346,1.36960583944965,0.174840804837995,1.33243904726265,1.01237633694913,3.49780939064073,0.788655413395594,0.411343300817216,0,0.340173160604279,0,0,0.47997726838022,0,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0.288851619751275,0,0,0,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,2.35265659399725,0.514518872071894,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.45839474333043,0.883885756421003,0.142371680799103,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0.448026887097336,0.421333260395256,0.511290967734173,1.03914401841148,1.06001872353102,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0,0,0.304465478312141,0.230615497256059,2.11011696773672,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0.161766849947409,1.10420759230197,0.969750506270444,0,0,0,0.510914110417183,0.479260498023681,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,1.12023300235348,0.248813941220186,0,0.210441855886474,0.780722657776222,0,0.180062129805349,2.86339153887859,1.29269348387523,2.0498195245576,0.749613796477831,0.776110112217047,0.215567992932842,0,0.351902248327898,0.219195732427575,1.11218899690239,0.348252166522167,0.61734640922383,1.39323986772945,0,0.51469581422943,0.852490498186778,0.414251545071004,2.34526059981096,1.80062061461015,0.946978942340841,4.32881309844288,4.47374627373397,3.0229412817553,1.3413670069981,1.5179494507732,1.31647879930784,2.79084688934462,0.56748166682099,0.584799949701329,1.09775057645525,0,0,0.205809224758569,0,0,1.2797295032114,3.94802342162745,0.128867461322093,0.403367049246685,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.754005626400808,0.994782360205754,0.19496408711912,0.898819408654221,2.16138049874694,0.199141273254367,0,1.94222471436539,1.1270773567308,4.07302655690629,2.52138233317913,1.40271639780637,0.632365371242573,1.18088118383682,1.255989822731,0.123397163921801,0.296452627087149,0.667380422864376,0.393117990226406,2.02375901146368,0,0.72353147925725,0.25462585178142,0.287696137450811,3.56697498905078,3.84385978463314,20.1275489138296,0,1.24815069245824,0.252578877947112,0.538192240565737,0.482443521363367,0,0,1.95557971730431,0.678980343100753,2.58159273117352,0.502518772325447,0,0.390267295715598,0.630540576424764,2.87904096543407,1.59454768657487,1.3109065177259,1.55416483679306,0.433947175744535,0,0,0,0,0,0,0.819674726883377,0.757412781613119,0,0.390438744296638,0.646270193198397,0,0,0,0.809621403349789,0.876767573733936,0,0,0,0.178065603667255,1.46598263418218,0.329940245945071,0,2.6705869977048,0.604647113929502,1.13163047853539,0,0,0.258428293168221,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,1.8006109403131,0.129358683782755,0,0.354680467284547,0.356737635204141,0,0,0,0,0,0,0.645857706783622,0.361877549568935,0.358117032009409,0.328281799490123,0,0,1.19609616558497,0.412773735926445,2.03713980106683,8.2882121082064,6.83471138605126,3.43167259809784,0.339956859987711,0,0.276399947608848,0,0.158167996790568,0.203319467126849,1.94409613479242,2.71814784818809,1.52853794622324,1.34864346384821,0.165306911450672,0.523511883968059,0.259229946583586,0,6.76431526421028,0.299033092087958,0.496375471371293,0.388902376688095,0.387479470433193,4.22390313726945,1.99507305697782,0.781226309063701,0.524296722128554,11.1128695579963,5.47257011889944,0.632022241256357,1.01362607645082,2.2596410576262,3.50786222040047,0.716106782669926,1.98681354781265,4.68762253127878,3.83992770653901,4.4425237977185,3.20068587950999,7.25948532985252,4.87289403698762,5.67649865677944,3.97381467417334,0,1.10992976687032,0.897138566094757,0.671538465456314,0,0,0.36630324853453,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,1.55681021376265,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,1.4198064492747,0.715308569841963,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0,0.118635018124174,1.18205378850676,0.409231043169689,0.619747364743864,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p3@Smc4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70099
|HGNC=
|MCL_coexpression_id=82
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-381bp_to_ENSMUST00000128134_5end
|cluster_id=chr3:68820009..68820030,+
|description=CAGE_peak_3_at_Smc4_5end
|id=chr3:68820009..68820030,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!4.36e-11!147;UBERON:0000926!7.24e-10!193;UBERON:0004120!7.24e-10!193;UBERON:0006603!7.24e-10!193;UBERON:0004177!2.53e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.96e-12,134;UBERON:0004177,3.14e-11,29;UBERON:0005057,3.14e-11,29;UBERON:0001041,1.69e-08,80;UBERON:0000077,2.54e-08,35;UBERON:0000926,4.97e-08,120;UBERON:0004120,4.97e-08,120;UBERON:0006603,4.97e-08,120;UBERON:0003081,8.40e-08,87;UBERON:0002370,1.17e-07,23;UBERON:0000974,1.17e-07,23;UBERON:0004807,1.17e-07,23;UBERON:0005058,1.17e-07,23;UBERON:0003351,1.17e-07,23;UBERON:0009113,1.17e-07,23;UBERON:0003295,1.17e-07,23;UBERON:0009722,1.17e-07,23;UBERON:0005562,1.17e-07,23;UBERON:0007690,1.17e-07,23;UBERON:0002390,1.55e-07,45;UBERON:0003061,1.55e-07,45;UBERON:0006562,3.54e-07,24;UBERON:0003408,3.54e-07,24;UBERON:0001557,3.54e-07,24;UBERON:0001042,3.54e-07,24;UBERON:0008814,3.54e-07,24;UBERON:0009145,3.54e-07,24;UBERON:0000065,8.01e-07,41
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0.903863264091034,0.422366166455,0,0,0.319088635981346,1.36960583944965,0.174840804837995,1.33243904726265,1.01237633694913,3.49780939064073,0.788655413395594,0.411343300817216,0,0.340173160604279,0,0,0.47997726838022,0,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0.288851619751275,0,0,0,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,2.35265659399725,0.514518872071894,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.45839474333043,0.883885756421003,0.142371680799103,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0.448026887097336,0.421333260395256,0.511290967734173,1.03914401841148,1.06001872353102,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0,0,0.304465478312141,0.230615497256059,2.11011696773672,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0.161766849947409,1.10420759230197,0.969750506270444,0,0,0,0.510914110417183,0.479260498023681,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,1.12023300235348,0.248813941220186,0,0.210441855886474,0.780722657776222,0,0.180062129805349,2.86339153887859,1.29269348387523,2.0498195245576,0.749613796477831,0.776110112217047,0.215567992932842,0,0.351902248327898,0.219195732427575,1.11218899690239,0.348252166522167,0.61734640922383,1.39323986772945,0,0.51469581422943,0.852490498186778,0.414251545071004,2.34526059981096,1.80062061461015,0.946978942340841,4.32881309844288,4.47374627373397,3.0229412817553,1.3413670069981,1.5179494507732,1.31647879930784,2.79084688934462,0.56748166682099,0.584799949701329,1.09775057645525,0,0,0.205809224758569,0,0,1.2797295032114,3.94802342162745,0.128867461322093,0.403367049246685,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.754005626400808,0.994782360205754,0.19496408711912,0.898819408654221,2.16138049874694,0.199141273254367,0,1.94222471436539,1.1270773567308,4.07302655690629,2.52138233317913,1.40271639780637,0.632365371242573,1.18088118383682,1.255989822731,0.123397163921801,0.296452627087149,0.667380422864376,0.393117990226406,2.02375901146368,0,0.72353147925725,0.25462585178142,0.287696137450811,3.56697498905078,3.84385978463314,20.1275489138296,0,1.24815069245824,0.252578877947112,0.538192240565737,0.482443521363367,0,0,1.95557971730431,0.678980343100753,2.58159273117352,0.502518772325447,0,0.390267295715598,0.630540576424764,2.87904096543407,1.59454768657487,1.3109065177259,1.55416483679306,0.433947175744535,0,0,0,0,0,0,0.819674726883377,0.757412781613119,0,0.390438744296638,0.646270193198397,0,0,0,0.809621403349789,0.876767573733936,0,0,0,0.178065603667255,1.46598263418218,0.329940245945071,0,2.6705869977048,0.604647113929502,1.13163047853539,0,0,0.258428293168221,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,1.8006109403131,0.129358683782755,0,0.354680467284547,0.356737635204141,0,0,0,0,0,0,0.645857706783622,0.361877549568935,0.358117032009409,0.328281799490123,0,0,1.19609616558497,0.412773735926445,2.03713980106683,8.2882121082064,6.83471138605126,3.43167259809784,0.339956859987711,0,0.276399947608848,0,0.158167996790568,0.203319467126849,1.94409613479242,2.71814784818809,1.52853794622324,1.34864346384821,0.165306911450672,0.523511883968059,0.259229946583586,0,6.76431526421028,0.299033092087958,0.496375471371293,0.388902376688095,0.387479470433193,4.22390313726945,1.99507305697782,0.781226309063701,0.524296722128554,11.1128695579963,5.47257011889944,0.632022241256357,1.01362607645082,2.2596410576262,3.50786222040047,0.716106782669926,1.98681354781265,4.68762253127878,3.83992770653901,4.4425237977185,3.20068587950999,7.25948532985252,4.87289403698762,5.67649865677944,3.97381467417334,0,1.10992976687032,0.897138566094757,0.671538465456314,0,0,0.36630324853453,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,1.55681021376265,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,1.4198064492747,0.715308569841963,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0,0.118635018124174,1.18205378850676,0.409231043169689,0.619747364743864,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421
|short_description=p3@Smc4
}}

Latest revision as of 16:26, 25 September 2015

Short description:p3@Smc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Smc4_5end
Coexpression cluster:MCL_coexpression_mm9:82
Association with transcript: -381bp_to_ENSMUST00000128134_5end
EntrezGene:Smc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Smc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D18.29
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H311.11
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C44.44
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E47.26
thymus, neonate N20.CNhs11186.820-7A24.87
thymus, neonate N25.CNhs11125.1362-25G75.68
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium2.96e-12134
hemopoietic organ3.14e-1129
immune organ3.14e-1129
foregut1.69e-0880
mixed endoderm/mesoderm-derived structure2.54e-0835
mesoderm4.97e-08120
mesoderm-derived structure4.97e-08120
presumptive mesoderm4.97e-08120
lateral plate mesoderm8.40e-0887
thymus1.17e-0723
neck1.17e-0723
respiratory system epithelium1.17e-0723
hemolymphoid system gland1.17e-0723
pharyngeal epithelium1.17e-0723
thymic region1.17e-0723
pharyngeal gland1.17e-0723
entire pharyngeal arch endoderm1.17e-0723
thymus primordium1.17e-0723
early pharyngeal endoderm1.17e-0723
hematopoietic system1.55e-0745
blood island1.55e-0745
pharynx3.54e-0724
gland of gut3.54e-0724
upper respiratory tract3.54e-0724
chordate pharynx3.54e-0724
pharyngeal arch system3.54e-0724
pharyngeal region of foregut3.54e-0724
respiratory tract8.01e-0741
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