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FFCP PHASE1:Mm9::chr3:7366702..7366713,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:7366702..7366713,+
|DHSsupport=NA
|short_description=p3@Pkia
|DPIdataset=NA
|description=CAGE_peak_3_at_Pkia_5end
|association_with_transcript=98bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end
|EntrezGene=18767
|EntrezGene=18767
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=P63248,Q3UTL0
|UniProt=P63248,Q3UTL0
|association_with_transcript=98bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end
|cluster_id=chr3:7366702..7366713,+
|description=CAGE_peak_3_at_Pkia_5end
|id=chr3:7366702..7366713,+
|ontology_enrichment_celltype=CL:0000540!1.90e-09!33;CL:0000047!1.90e-09!33;CL:0000031!1.90e-09!33;CL:0000404!1.90e-09!33;CL:0000393!1.01e-08!39;CL:0000211!1.01e-08!39;CL:0000117!3.72e-07!23;CL:0000337!3.72e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,7.10e-11,33;CL:0000047,7.10e-11,33;CL:0000031,7.10e-11,33;CL:0000404,7.10e-11,33;CL:0000393,1.25e-09,39;CL:0000211,1.25e-09,39;CL:0000117,3.06e-08,23;CL:0000337,3.06e-08,23;CL:0002319,9.49e-07,43;CL:0000221,9.76e-07,44;CL:0000133,9.76e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.17e-12!102;UBERON:0000924!2.17e-12!102;UBERON:0006601!2.17e-12!102;UBERON:0001017!9.87e-12!73;UBERON:0005743!9.87e-12!73;UBERON:0002346!3.66e-11!71;UBERON:0003075!3.66e-11!71;UBERON:0007284!3.66e-11!71;UBERON:0000073!8.19e-11!75;UBERON:0001016!8.19e-11!75;UBERON:0000033!2.74e-09!63;UBERON:0007100!3.95e-09!18;UBERON:0000948!3.95e-09!18;UBERON:0005498!3.95e-09!18;UBERON:0004140!3.95e-09!18;UBERON:0009881!3.95e-09!18;UBERON:0004141!3.95e-09!18;UBERON:0003084!3.95e-09!18;UBERON:0007005!3.95e-09!18;UBERON:0004139!3.95e-09!18;UBERON:0004291!3.95e-09!18;UBERON:0003056!3.10e-08!49;UBERON:0004535!5.83e-08!23;UBERON:0001009!5.83e-08!23;UBERON:0001049!1.09e-07!52;UBERON:0005068!1.09e-07!52;UBERON:0006241!1.09e-07!52;UBERON:0007135!1.09e-07!52;UBERON:0000468!1.26e-07!333;UBERON:0002020!2.41e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.32e-21,92;UBERON:0004121,6.14e-13,95;UBERON:0000924,6.14e-13,95;UBERON:0006601,6.14e-13,95;UBERON:0002346,1.64e-12,64;UBERON:0003075,1.64e-12,64;UBERON:0007284,1.64e-12,64;UBERON:0001017,6.41e-12,73;UBERON:0001016,4.65e-11,75;UBERON:0010371,6.42e-11,73;UBERON:0007100,7.17e-10,18;UBERON:0000948,7.17e-10,18;UBERON:0005498,7.17e-10,18;UBERON:0004140,7.17e-10,18;UBERON:0009881,7.17e-10,18;UBERON:0004141,7.17e-10,18;UBERON:0003084,7.17e-10,18;UBERON:0007005,7.17e-10,18;UBERON:0004139,7.17e-10,18;UBERON:0004291,7.17e-10,18;UBERON:0000073,1.26e-08,54;UBERON:0003056,1.70e-08,49;UBERON:0004535,1.78e-08,23;UBERON:0001009,1.78e-08,23;UBERON:0001049,5.64e-08,52;UBERON:0005068,5.64e-08,52;UBERON:0006241,5.64e-08,52;UBERON:0007135,5.64e-08,52;UBERON:0002020,6.92e-08,34
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.21652317463417,0.183546752161682,0,0.218025156380447,1.31811709640683,0.58328969722285,0.279972843250725,2.87505128729943,0,0,0,0.514518872071894,2.29226751951005,2.06268836910977,7.48570905180512,7.40587370980846,3.80298842103708,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,2.28117147078651,1.62007125998029,1.47227472945967,4.28476476605705,3.09215957332259,3.06226998037385,1.43768206527355,0,3.30347642998166,4.34136949489638,3.5329502648936,7.78129097608144,10.5210790142771,12.5019208933622,2.79182999001381,2.25105044012672,3.81995619442025,10.3120004915784,11.2473627831291,9.87917062874093,0,0.0755715601067855,1.73918693221007,0,0,0,0,0,4.0728881838208,0.340860645156116,0.519572009205738,0.35333957451034,1.26759077799012,0,0,0,0,0,0,0.79928715803342,0.517875767294343,0.445326417194474,1.04091196059682,1.21786191324856,1.61430848079241,1.20578112442098,1.76383060703557,0.125666591329675,0,1.44599356919912,1.76922110389975,9.05894359705491,4.85851340612866,3.87900202508178,1.86391761218122,4.68449275218475,6.28340120440365,0,0,0,0,5.84183493678809,0.915001205637253,4.14659361972453,3.30266208365325,2.04572365864264,3.74018480207208,3.0825839982874,1.42575109390443,1.49288364732112,0.505445516867349,1.89397670297827,3.513251959993,4.13823787980251,7.02242306240862,6.63101198477146,6.32739442107349,8.07116437794554,6.46541899462129,2.58703370739016,2.80238390812695,4.9167580843633,2.28736461413134,2.84954452155847,3.05851974148158,3.1342694986995,0.205782136407943,0.59710280045548,0,0,0,5.59239585845855,4.92504725960302,7.92273070428465,7.33908680314152,7.08351234290654,7.25055430570678,7.20855228726264,6.43856163359086,6.07179780309281,5.9241545968853,8.53670813211295,8.18794976413143,10.2339991197733,11.6361561104257,6.71032093801859,1.68231958851302,6.27718135513635,0,0,1.49301775374664,1.85789337488351,1.54640953586512,0.605050573870028,0.444756087689741,0.570676878337677,0,0.823494773620054,0.251335208800269,0.795825888164603,0,0,0,0,0.948339504765408,1.71372768914593,2.25415471346161,0.610953983535943,0.581857461502877,0.911765658574141,0.379419222745544,0.295220295959204,1.09899109488962,0.616985819609003,0,0.333690211432188,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0.372140947668503,1.5601883655728,0,0.179397413521912,0.482443521363367,1.29327233116623,1.32643988239339,0.977789858652155,0.848725428875941,0.704070744865506,0.670025029767263,0.238043640886014,1.36593553500459,0.472905432318573,0.8858587585951,0.637819074629948,0.655453258862952,1.38147985492716,0.433947175744535,0,0,0,0.275936746304732,3.05046120976805,2.69586879162067,0,16.6630811954886,3.15508219416257,5.46614242015294,5.17016154558717,2.15071918157297,4.01037613348309,3.11384183867716,2.83367491172426,3.50707029493574,5.53402889125133,1.92792789853084,1.13552068166615,1.42452482933804,0.81443479676788,1.31976098378028,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0,2.70091641046965,1.4229455216103,1.28602221018955,0.709360934569094,0.713475270408282,1.31639216481697,1.2178597964584,0,0.21183207086382,0,1.15420377059036,1.45317984026315,2.41251699712623,0.716234064018819,0.820704498725306,0,2.78137953015765,0,0.82554747185289,0.370389054739423,0,0.136694227721025,0,0,0,0.138199973804424,0,2.21435195506795,0.813277868507395,0.756037385752609,1.04544148007234,1.31017538247707,2.15782954215713,1.07449492442937,0.523511883968059,0,0,0,0.448549638131936,0,0.388902376688095,0.258319646955462,0.506868376472335,0.352071715937262,0.781226309063701,0.943734099831398,0.483168241652012,1.44015003128933,0,0.202725215290164,0.616265742988964,0.129920822977795,0.179026695667481,0.79472541912506,0.120195449519969,0.295379054349154,0.201932899896295,0,0,0,0.0962118416403295,0.116876902181569,8.38902419376282,0,0,0,0.579568782096571,0.375364950902364,0.549454872801795,0,0,4.51801474093653,7.36520378411483,6.87474616127276,5.67115501734169,4.11049511862385,0,2.70009000092722,1.80128481289688,2.71885445390523,2.07104124700728,4.67043064128795,3.99024873401031,2.39027048055788,2.91728060481953,3.5634237646757,2.94149613520023,7.55638874525492,4.32673620201678,3.85103051510178,4.29585259998456,4.30914809813408,4.52703219326583,5.61849044819294,6.72264100251127,5.80098236451694,6.19181798667996,4.28772005995965,5.20854895252004,4.12085900803307,5.4463600449727,4.4573002810104,2.8396128985494,3.81497903915713,5.0871245821315,3.95259397744389,4.06150117880047,7.13419094203813,4.99832451731901,5.83957689537206,4.48913817326191,4.74540072496697,4.23569274214923,5.32000356120596,5.42278944150881,3.66522560864169,4.99621155875892,5.38042699424439,3.65280791882107,4.78220830172108,6.83833399270498,12.9845987947436
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.21652317463417,0.183546752161682,0,0.218025156380447,1.31811709640683,0.58328969722285,0.279972843250725,2.87505128729943,0,0,0,0.514518872071894,2.29226751951005,2.06268836910977,7.48570905180512,7.40587370980846,3.80298842103708,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,2.28117147078651,1.62007125998029,1.47227472945967,4.28476476605705,3.09215957332259,3.06226998037385,1.43768206527355,0,3.30347642998166,4.34136949489638,3.5329502648936,7.78129097608144,10.5210790142771,12.5019208933622,2.79182999001381,2.25105044012672,3.81995619442025,10.3120004915784,11.2473627831291,9.87917062874093,0,0.0755715601067855,1.73918693221007,0,0,0,0,0,4.0728881838208,0.340860645156116,0.519572009205738,0.35333957451034,1.26759077799012,0,0,0,0,0,0,0.79928715803342,0.517875767294343,0.445326417194474,1.04091196059682,1.21786191324856,1.61430848079241,1.20578112442098,1.76383060703557,0.125666591329675,0,1.44599356919912,1.76922110389975,9.05894359705491,4.85851340612866,3.87900202508178,1.86391761218122,4.68449275218475,6.28340120440365,0,0,0,0,5.84183493678809,0.915001205637253,4.14659361972453,3.30266208365325,2.04572365864264,3.74018480207208,3.0825839982874,1.42575109390443,1.49288364732112,0.505445516867349,1.89397670297827,3.513251959993,4.13823787980251,7.02242306240862,6.63101198477146,6.32739442107349,8.07116437794554,6.46541899462129,2.58703370739016,2.80238390812695,4.9167580843633,2.28736461413134,2.84954452155847,3.05851974148158,3.1342694986995,0.205782136407943,0.59710280045548,0,0,0,5.59239585845855,4.92504725960302,7.92273070428465,7.33908680314152,7.08351234290654,7.25055430570678,7.20855228726264,6.43856163359086,6.07179780309281,5.9241545968853,8.53670813211295,8.18794976413143,10.2339991197733,11.6361561104257,6.71032093801859,1.68231958851302,6.27718135513635,0,0,1.49301775374664,1.85789337488351,1.54640953586512,0.605050573870028,0.444756087689741,0.570676878337677,0,0.823494773620054,0.251335208800269,0.795825888164603,0,0,0,0,0.948339504765408,1.71372768914593,2.25415471346161,0.610953983535943,0.581857461502877,0.911765658574141,0.379419222745544,0.295220295959204,1.09899109488962,0.616985819609003,0,0.333690211432188,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0.372140947668503,1.5601883655728,0,0.179397413521912,0.482443521363367,1.29327233116623,1.32643988239339,0.977789858652155,0.848725428875941,0.704070744865506,0.670025029767263,0.238043640886014,1.36593553500459,0.472905432318573,0.8858587585951,0.637819074629948,0.655453258862952,1.38147985492716,0.433947175744535,0,0,0,0.275936746304732,3.05046120976805,2.69586879162067,0,16.6630811954886,3.15508219416257,5.46614242015294,5.17016154558717,2.15071918157297,4.01037613348309,3.11384183867716,2.83367491172426,3.50707029493574,5.53402889125133,1.92792789853084,1.13552068166615,1.42452482933804,0.81443479676788,1.31976098378028,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0,2.70091641046965,1.4229455216103,1.28602221018955,0.709360934569094,0.713475270408282,1.31639216481697,1.2178597964584,0,0.21183207086382,0,1.15420377059036,1.45317984026315,2.41251699712623,0.716234064018819,0.820704498725306,0,2.78137953015765,0,0.82554747185289,0.370389054739423,0,0.136694227721025,0,0,0,0.138199973804424,0,2.21435195506795,0.813277868507395,0.756037385752609,1.04544148007234,1.31017538247707,2.15782954215713,1.07449492442937,0.523511883968059,0,0,0,0.448549638131936,0,0.388902376688095,0.258319646955462,0.506868376472335,0.352071715937262,0.781226309063701,0.943734099831398,0.483168241652012,1.44015003128933,0,0.202725215290164,0.616265742988964,0.129920822977795,0.179026695667481,0.79472541912506,0.120195449519969,0.295379054349154,0.201932899896295,0,0,0,0.0962118416403295,0.116876902181569,8.38902419376282,0,0,0,0.579568782096571,0.375364950902364,0.549454872801795,0,0,4.51801474093653,7.36520378411483,6.87474616127276,5.67115501734169,4.11049511862385,0,2.70009000092722,1.80128481289688,2.71885445390523,2.07104124700728,4.67043064128795,3.99024873401031,2.39027048055788,2.91728060481953,3.5634237646757,2.94149613520023,7.55638874525492,4.32673620201678,3.85103051510178,4.29585259998456,4.30914809813408,4.52703219326583,5.61849044819294,6.72264100251127,5.80098236451694,6.19181798667996,4.28772005995965,5.20854895252004,4.12085900803307,5.4463600449727,4.4573002810104,2.8396128985494,3.81497903915713,5.0871245821315,3.95259397744389,4.06150117880047,7.13419094203813,4.99832451731901,5.83957689537206,4.48913817326191,4.74540072496697,4.23569274214923,5.32000356120596,5.42278944150881,3.66522560864169,4.99621155875892,5.38042699424439,3.65280791882107,4.78220830172108,6.83833399270498,12.9845987947436
|short_description=p3@Pkia
}}
}}

Latest revision as of 16:47, 25 September 2015

Short description:p3@Pkia
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pkia_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 98bp_to_ENSMUST00000028999, NM_008862, uc008oof.1_5end
EntrezGene:Pkia
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pkia

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.52
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C66.33
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G86.47
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H24.92
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I25.92
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G18.19
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D26.71
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.42
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.10e-1133
neuronal stem cell7.10e-1133
neuroblast7.10e-1133
electrically signaling cell7.10e-1133
electrically responsive cell1.25e-0939
electrically active cell1.25e-0939
CNS neuron (sensu Vertebrata)3.06e-0823
neuroblast (sensu Vertebrata)3.06e-0823
neural cell9.49e-0743
ectodermal cell9.76e-0744
neurectodermal cell9.76e-0744

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.32e-2192
ectoderm-derived structure6.14e-1395
ectoderm6.14e-1395
presumptive ectoderm6.14e-1395
neurectoderm1.64e-1264
neural plate1.64e-1264
presumptive neural plate1.64e-1264
central nervous system6.41e-1273
nervous system4.65e-1175
ecto-epithelium6.42e-1173
primary circulatory organ7.17e-1018
heart7.17e-1018
primitive heart tube7.17e-1018
primary heart field7.17e-1018
anterior lateral plate mesoderm7.17e-1018
heart tube7.17e-1018
heart primordium7.17e-1018
cardiac mesoderm7.17e-1018
cardiogenic plate7.17e-1018
heart rudiment7.17e-1018
regional part of nervous system1.26e-0854
pre-chordal neural plate1.70e-0849
cardiovascular system1.78e-0823
circulatory system1.78e-0823
neural tube5.64e-0852
neural rod5.64e-0852
future spinal cord5.64e-0852
neural keel5.64e-0852
gray matter6.92e-0834
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