FFCP PHASE1:Mm9::chr5:145897800..145897819,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231887 | |EntrezGene=231887 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-235bp_to_ENSMUST00000123111_5end | |association_with_transcript=-235bp_to_ENSMUST00000123111_5end | ||
|cluster_id=chr5:145897800..145897819,- | |||
|description=CAGE_peak_2_at_Pdap1_5end | |description=CAGE_peak_2_at_Pdap1_5end | ||
|id=chr5:145897800..145897819,- | |id=chr5:145897800..145897819,- | ||
|ontology_enrichment_celltype=CL:0000117!1.56e-09!23;CL:0000337!1.56e-09!23;CL:0000540!5.56e-09!33;CL:0000047!5.56e-09!33;CL:0000031!5.56e-09!33;CL:0000404!5.56e-09!33;CL:0002319!8.53e-07!43;CL:0000393!8.78e-07!39;CL:0000211!8.78e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.56e-09!23;CL:0000337!1.56e-09!23;CL:0000540!5.56e-09!33;CL:0000047!5.56e-09!33;CL:0000031!5.56e-09!33;CL:0000404!5.56e-09!33;CL:0002319!8.53e-07!43;CL:0000393!8.78e-07!39;CL:0000211!8.78e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-11,23;CL:0000337,1.25e-11,23;CL:0000540,7.63e-11,33;CL:0000047,7.63e-11,33;CL:0000031,7.63e-11,33;CL:0000404,7.63e-11,33;CL:0000393,1.68e-08,39;CL:0000211,1.68e-08,39;CL:0002319,4.24e-08,43;CL:0000221,1.03e-07,44;CL:0000133,1.03e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.41e-10!34;UBERON:0001017!6.06e-10!73;UBERON:0005743!6.06e-10!73;UBERON:0000073!3.08e-09!75;UBERON:0001016!3.08e-09!75;UBERON:0002791!1.26e-08!29;UBERON:0003528!1.26e-08!29;UBERON:0001893!1.26e-08!29;UBERON:0002780!8.44e-08!39;UBERON:0001890!8.44e-08!39;UBERON:0006240!8.44e-08!39;UBERON:0003080!1.28e-07!40;UBERON:0002616!1.44e-07!49;UBERON:0001049!1.65e-07!52;UBERON:0005068!1.65e-07!52;UBERON:0006241!1.65e-07!52;UBERON:0007135!1.65e-07!52;UBERON:0000955!1.88e-07!50;UBERON:0006238!1.88e-07!50;UBERON:0002346!1.99e-07!71;UBERON:0003075!1.99e-07!71;UBERON:0007284!1.99e-07!71;UBERON:0003056!2.87e-07!49;UBERON:0000922!7.38e-07!328;UBERON:0004121!9.04e-07!102;UBERON:0000924!9.04e-07!102;UBERON:0006601!9.04e-07!102 | |ontology_enrichment_uberon=UBERON:0002020!3.41e-10!34;UBERON:0001017!6.06e-10!73;UBERON:0005743!6.06e-10!73;UBERON:0000073!3.08e-09!75;UBERON:0001016!3.08e-09!75;UBERON:0002791!1.26e-08!29;UBERON:0003528!1.26e-08!29;UBERON:0001893!1.26e-08!29;UBERON:0002780!8.44e-08!39;UBERON:0001890!8.44e-08!39;UBERON:0006240!8.44e-08!39;UBERON:0003080!1.28e-07!40;UBERON:0002616!1.44e-07!49;UBERON:0001049!1.65e-07!52;UBERON:0005068!1.65e-07!52;UBERON:0006241!1.65e-07!52;UBERON:0007135!1.65e-07!52;UBERON:0000955!1.88e-07!50;UBERON:0006238!1.88e-07!50;UBERON:0002346!1.99e-07!71;UBERON:0003075!1.99e-07!71;UBERON:0007284!1.99e-07!71;UBERON:0003056!2.87e-07!49;UBERON:0000922!7.38e-07!328;UBERON:0004121!9.04e-07!102;UBERON:0000924!9.04e-07!102;UBERON:0006601!9.04e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.97e-13,34;UBERON:0003528,1.14e-10,29;UBERON:0002791,1.14e-10,29;UBERON:0001893,1.14e-10,29;UBERON:0001017,1.50e-09,73;UBERON:0001016,6.12e-09,75;UBERON:0000073,5.16e-08,54;UBERON:0002780,1.76e-07,39;UBERON:0001890,1.76e-07,39;UBERON:0006240,1.76e-07,39;UBERON:0003080,4.26e-07,40;UBERON:0002021,5.24e-07,10;UBERON:0000411,5.24e-07,10;UBERON:0001950,5.24e-07,10;UBERON:0000956,5.75e-07,21;UBERON:0001869,5.75e-07,21;UBERON:0000203,5.75e-07,21;UBERON:0010314,6.81e-07,92;UBERON:0004121,9.73e-07,95;UBERON:0000924,9.73e-07,95;UBERON:0006601,9.73e-07,95 | |||
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| ||
|short_description=p2@Pdap1 | |short_description=p2@Pdap1 | ||
}} | }} |
Latest revision as of 17:29, 25 September 2015
Short description: | p2@Pdap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pdap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | -235bp_to_ENSMUST00000123111_5end |
EntrezGene: | Pdap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.25e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.25e-11 | 23 |
neuron | 7.63e-11 | 33 |
neuronal stem cell | 7.63e-11 | 33 |
neuroblast | 7.63e-11 | 33 |
electrically signaling cell | 7.63e-11 | 33 |
electrically responsive cell | 1.68e-08 | 39 |
electrically active cell | 1.68e-08 | 39 |
neural cell | 4.24e-08 | 43 |
ectodermal cell | 1.03e-07 | 44 |
neurectodermal cell | 1.03e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
gray matter | 8.97e-13 | 34 |
brain grey matter | 1.14e-10 | 29 |
regional part of telencephalon | 1.14e-10 | 29 |
telencephalon | 1.14e-10 | 29 |
central nervous system | 1.50e-09 | 73 |
nervous system | 6.12e-09 | 75 |
regional part of nervous system | 5.16e-08 | 54 |
regional part of forebrain | 1.76e-07 | 39 |
forebrain | 1.76e-07 | 39 |
future forebrain | 1.76e-07 | 39 |
anterior neural tube | 4.26e-07 | 40 |
occipital lobe | 5.24e-07 | 10 |
visual cortex | 5.24e-07 | 10 |
neocortex | 5.24e-07 | 10 |
cerebral cortex | 5.75e-07 | 21 |
cerebral hemisphere | 5.75e-07 | 21 |
pallium | 5.75e-07 | 21 |
structure with developmental contribution from neural crest | 6.81e-07 | 92 |
ectoderm-derived structure | 9.73e-07 | 95 |
ectoderm | 9.73e-07 | 95 |
presumptive ectoderm | 9.73e-07 | 95 |