FFCP PHASE1:Mm9::chr8:73118260..73118271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71780 | |EntrezGene=71780 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=735 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JHU9 | |UniProt=Q9JHU9 | ||
|association_with_transcript=-108bp_to_ENSMUST00000019283,NM_023627,uc009mav.1,uc009maw.1_5end | |association_with_transcript=-108bp_to_ENSMUST00000019283,NM_023627,uc009mav.1,uc009maw.1_5end | ||
|cluster_id=chr8:73118260..73118271,+ | |||
|description=CAGE_peak_2_at_Isyna1_5end | |description=CAGE_peak_2_at_Isyna1_5end | ||
|id=chr8:73118260..73118271,+ | |id=chr8:73118260..73118271,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.01e-15!50;CL:0002319!6.35e-15!43;CL:0000221!7.19e-15!44;CL:0000133!7.19e-15!44;CL:0000540!3.58e-14!33;CL:0000047!3.58e-14!33;CL:0000031!3.58e-14!33;CL:0000404!3.58e-14!33;CL:0000393!4.30e-14!39;CL:0000211!4.30e-14!39;CL:0000117!8.09e-14!23;CL:0000337!8.09e-14!23 | |ontology_enrichment_celltype=CL:0000055!2.01e-15!50;CL:0002319!6.35e-15!43;CL:0000221!7.19e-15!44;CL:0000133!7.19e-15!44;CL:0000540!3.58e-14!33;CL:0000047!3.58e-14!33;CL:0000031!3.58e-14!33;CL:0000404!3.58e-14!33;CL:0000393!4.30e-14!39;CL:0000211!4.30e-14!39;CL:0000117!8.09e-14!23;CL:0000337!8.09e-14!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.17e-15,43;CL:0000221,1.34e-15,44;CL:0000133,1.34e-15,44;CL:0000540,8.90e-15,33;CL:0000047,8.90e-15,33;CL:0000031,8.90e-15,33;CL:0000404,8.90e-15,33;CL:0000393,9.13e-15,39;CL:0000211,9.13e-15,39;CL:0000117,2.09e-14,23;CL:0000337,2.09e-14,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.83e-23!73;UBERON:0005743!3.83e-23!73;UBERON:0000073!1.98e-21!75;UBERON:0001016!1.98e-21!75;UBERON:0001049!4.06e-16!52;UBERON:0005068!4.06e-16!52;UBERON:0006241!4.06e-16!52;UBERON:0007135!4.06e-16!52;UBERON:0002346!3.51e-15!71;UBERON:0003075!3.51e-15!71;UBERON:0007284!3.51e-15!71;UBERON:0004121!3.60e-15!102;UBERON:0000924!3.60e-15!102;UBERON:0006601!3.60e-15!102;UBERON:0000955!7.51e-15!50;UBERON:0006238!7.51e-15!50;UBERON:0002616!1.07e-14!49;UBERON:0000033!2.40e-14!63;UBERON:0003056!9.41e-14!49;UBERON:0003080!1.20e-13!40;UBERON:0002780!3.30e-13!39;UBERON:0001890!3.30e-13!39;UBERON:0006240!3.30e-13!39;UBERON:0002020!5.68e-13!34;UBERON:0000153!3.97e-11!94;UBERON:0007811!4.83e-11!86;UBERON:0002791!2.37e-10!29;UBERON:0003528!2.37e-10!29;UBERON:0001893!2.37e-10!29 | |ontology_enrichment_uberon=UBERON:0001017!3.83e-23!73;UBERON:0005743!3.83e-23!73;UBERON:0000073!1.98e-21!75;UBERON:0001016!1.98e-21!75;UBERON:0001049!4.06e-16!52;UBERON:0005068!4.06e-16!52;UBERON:0006241!4.06e-16!52;UBERON:0007135!4.06e-16!52;UBERON:0002346!3.51e-15!71;UBERON:0003075!3.51e-15!71;UBERON:0007284!3.51e-15!71;UBERON:0004121!3.60e-15!102;UBERON:0000924!3.60e-15!102;UBERON:0006601!3.60e-15!102;UBERON:0000955!7.51e-15!50;UBERON:0006238!7.51e-15!50;UBERON:0002616!1.07e-14!49;UBERON:0000033!2.40e-14!63;UBERON:0003056!9.41e-14!49;UBERON:0003080!1.20e-13!40;UBERON:0002780!3.30e-13!39;UBERON:0001890!3.30e-13!39;UBERON:0006240!3.30e-13!39;UBERON:0002020!5.68e-13!34;UBERON:0000153!3.97e-11!94;UBERON:0007811!4.83e-11!86;UBERON:0002791!2.37e-10!29;UBERON:0003528!2.37e-10!29;UBERON:0001893!2.37e-10!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.16e-24,73;UBERON:0001016,4.46e-22,75;UBERON:0000073,8.74e-18,54;UBERON:0002346,1.71e-16,64;UBERON:0003075,1.71e-16,64;UBERON:0007284,1.71e-16,64;UBERON:0001049,2.01e-16,52;UBERON:0005068,2.01e-16,52;UBERON:0006241,2.01e-16,52;UBERON:0007135,2.01e-16,52;UBERON:0010314,2.53e-16,92;UBERON:0004121,7.33e-16,95;UBERON:0000924,7.33e-16,95;UBERON:0006601,7.33e-16,95;UBERON:0003080,3.17e-14,40;UBERON:0003056,4.17e-14,49;UBERON:0000955,8.53e-14,47;UBERON:0006238,8.53e-14,47;UBERON:0002780,9.14e-14,39;UBERON:0001890,9.14e-14,39;UBERON:0006240,9.14e-14,39;UBERON:0002616,1.23e-13,46;UBERON:0002020,1.61e-13,34;UBERON:0010371,1.52e-12,73;UBERON:0003528,8.98e-11,29;UBERON:0002791,8.98e-11,29;UBERON:0001893,8.98e-11,29;UBERON:0000025,8.17e-07,114 | |||
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| ||
|short_description=p2@Isyna1 | |short_description=p2@Isyna1 | ||
}} | }} |
Latest revision as of 17:38, 25 September 2015
Short description: | p2@Isyna1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Isyna1_5end |
Coexpression cluster: | MCL_coexpression_mm9:735 |
Association with transcript: | -108bp_to_ENSMUST00000019283, NM_023627, uc009mav.1, uc009maw.1_5end |
EntrezGene: | Isyna1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.17e-15 | 43 |
ectodermal cell | 1.34e-15 | 44 |
neurectodermal cell | 1.34e-15 | 44 |
neuron | 8.90e-15 | 33 |
neuronal stem cell | 8.90e-15 | 33 |
neuroblast | 8.90e-15 | 33 |
electrically signaling cell | 8.90e-15 | 33 |
electrically responsive cell | 9.13e-15 | 39 |
electrically active cell | 9.13e-15 | 39 |
CNS neuron (sensu Vertebrata) | 2.09e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-14 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.16e-24 | 73 |
nervous system | 4.46e-22 | 75 |
regional part of nervous system | 8.74e-18 | 54 |
neurectoderm | 1.71e-16 | 64 |
neural plate | 1.71e-16 | 64 |
presumptive neural plate | 1.71e-16 | 64 |
neural tube | 2.01e-16 | 52 |
neural rod | 2.01e-16 | 52 |
future spinal cord | 2.01e-16 | 52 |
neural keel | 2.01e-16 | 52 |
structure with developmental contribution from neural crest | 2.53e-16 | 92 |
ectoderm-derived structure | 7.33e-16 | 95 |
ectoderm | 7.33e-16 | 95 |
presumptive ectoderm | 7.33e-16 | 95 |
anterior neural tube | 3.17e-14 | 40 |
pre-chordal neural plate | 4.17e-14 | 49 |
brain | 8.53e-14 | 47 |
future brain | 8.53e-14 | 47 |
regional part of forebrain | 9.14e-14 | 39 |
forebrain | 9.14e-14 | 39 |
future forebrain | 9.14e-14 | 39 |
regional part of brain | 1.23e-13 | 46 |
gray matter | 1.61e-13 | 34 |
ecto-epithelium | 1.52e-12 | 73 |
brain grey matter | 8.98e-11 | 29 |
regional part of telencephalon | 8.98e-11 | 29 |
telencephalon | 8.98e-11 | 29 |
tube | 8.17e-07 | 114 |