FFCP PHASE1:Mm9::chr2:130100173..130100190,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67134 | |EntrezGene=67134 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |MCL_coexpression_id=155 | ||
|TSSclassifier=NA | |||
|UniProt=E0CXZ0 | |UniProt=E0CXZ0 | ||
|association_with_transcript=0bp_to_ENSMUST00000136621,ENSMUST00000150745,ENSMUST00000161543_5end | |association_with_transcript=0bp_to_ENSMUST00000136621,ENSMUST00000150745,ENSMUST00000161543_5end | ||
|cluster_id=chr2:130100173..130100190,+ | |||
|description=CAGE_peak_1_at_Nop56_5end | |description=CAGE_peak_1_at_Nop56_5end | ||
|id=chr2:130100173..130100190,+ | |id=chr2:130100173..130100190,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.22e-13!32;CL:0002032!1.22e-13!32;CL:0000037!1.22e-13!32;CL:0000566!1.22e-13!32;CL:0000837!1.22e-13!32;CL:0000034!9.83e-13!97;CL:0000723!5.95e-11!91;CL:0000048!5.95e-11!91;CL:0002031!2.80e-10!25;CL:0000548!3.00e-09!115;CL:0000004!3.00e-09!115;CL:0000255!3.00e-09!115;CL:0000542!5.12e-09!13;CL:0000051!5.12e-09!13;CL:0000838!7.32e-09!12;CL:0000084!2.93e-08!11;CL:0000827!2.93e-08!11;CL:0000144!3.21e-08!121;CL:0000012!3.21e-08!121;CL:0002371!6.06e-08!118;CL:0002320!6.29e-08!46;CL:0000134!6.29e-08!46;CL:0000791!4.73e-07!9;CL:0000789!4.73e-07!9;CL:0002420!4.73e-07!9;CL:0002419!4.73e-07!9;CL:0000790!4.73e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.22e-13!32;CL:0002032!1.22e-13!32;CL:0000037!1.22e-13!32;CL:0000566!1.22e-13!32;CL:0000837!1.22e-13!32;CL:0000034!9.83e-13!97;CL:0000723!5.95e-11!91;CL:0000048!5.95e-11!91;CL:0002031!2.80e-10!25;CL:0000548!3.00e-09!115;CL:0000004!3.00e-09!115;CL:0000255!3.00e-09!115;CL:0000542!5.12e-09!13;CL:0000051!5.12e-09!13;CL:0000838!7.32e-09!12;CL:0000084!2.93e-08!11;CL:0000827!2.93e-08!11;CL:0000144!3.21e-08!121;CL:0000012!3.21e-08!121;CL:0002371!6.06e-08!118;CL:0002320!6.29e-08!46;CL:0000134!6.29e-08!46;CL:0000791!4.73e-07!9;CL:0000789!4.73e-07!9;CL:0002420!4.73e-07!9;CL:0002419!4.73e-07!9;CL:0000790!4.73e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.22e-13,32;CL:0002032,1.22e-13,32;CL:0000037,1.22e-13,32;CL:0000837,1.22e-13,32;CL:0000034,9.83e-13,97;CL:0000723,5.95e-11,91;CL:0000048,5.95e-11,91;CL:0002031,2.80e-10,25;CL:0000542,5.12e-09,13;CL:0000051,5.12e-09,13;CL:0000838,7.32e-09,12;CL:0000084,2.93e-08,11;CL:0000827,2.93e-08,11;CL:0002320,6.29e-08,46;CL:0000134,6.29e-08,46;CL:0000791,4.73e-07,9;CL:0000789,4.73e-07,9;CL:0002420,4.73e-07,9;CL:0002419,4.73e-07,9;CL:0000790,4.73e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.29e-08!46;UBERON:0002193!1.16e-07!48;UBERON:0000072!1.26e-07!27;UBERON:0002390!1.88e-07!45;UBERON:0003061!1.88e-07!45;UBERON:0004177!2.31e-07!29 | |ontology_enrichment_uberon=UBERON:0002384!6.29e-08!46;UBERON:0002193!1.16e-07!48;UBERON:0000072!1.26e-07!27;UBERON:0002390!1.88e-07!45;UBERON:0003061!1.88e-07!45;UBERON:0004177!2.31e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.29e-08,46;UBERON:0002193,1.16e-07,48;UBERON:0002405,1.16e-07,48;UBERON:0000072,1.26e-07,27;UBERON:0002390,1.88e-07,45;UBERON:0003061,1.88e-07,45;UBERON:0004177,2.31e-07,29;UBERON:0005057,2.31e-07,29 | |||
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| ||
|short_description=p1@Nop56 | |short_description=p1@Nop56 | ||
}} | }} |
Latest revision as of 17:38, 25 September 2015
Short description: | p1@Nop56 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nop56_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000136621, ENSMUST00000150745, ENSMUST00000161543_5end |
EntrezGene: | Nop56 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.22e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.22e-13 | 32 |
hematopoietic stem cell | 1.22e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.22e-13 | 32 |
stem cell | 9.83e-13 | 97 |
somatic stem cell | 5.95e-11 | 91 |
multi fate stem cell | 5.95e-11 | 91 |
hematopoietic lineage restricted progenitor cell | 2.80e-10 | 25 |
lymphocyte | 5.12e-09 | 13 |
common lymphoid progenitor | 5.12e-09 | 13 |
lymphoid lineage restricted progenitor cell | 7.32e-09 | 12 |
T cell | 2.93e-08 | 11 |
pro-T cell | 2.93e-08 | 11 |
connective tissue cell | 6.29e-08 | 46 |
mesenchymal cell | 6.29e-08 | 46 |
mature alpha-beta T cell | 4.73e-07 | 9 |
alpha-beta T cell | 4.73e-07 | 9 |
immature T cell | 4.73e-07 | 9 |
mature T cell | 4.73e-07 | 9 |
immature alpha-beta T cell | 4.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.29e-08 | 46 |
hemolymphoid system | 1.16e-07 | 48 |
immune system | 1.16e-07 | 48 |
segment of respiratory tract | 1.26e-07 | 27 |
hematopoietic system | 1.88e-07 | 45 |
blood island | 1.88e-07 | 45 |
hemopoietic organ | 2.31e-07 | 29 |
immune organ | 2.31e-07 | 29 |