FFCP PHASE1:Mm9::chr8:73118300..73118311,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71780 | |EntrezGene=71780 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JHU9 | |UniProt=Q9JHU9 | ||
|association_with_transcript=-68bp_to_ENSMUST00000019283,NM_023627,uc009mav.1,uc009maw.1_5end | |association_with_transcript=-68bp_to_ENSMUST00000019283,NM_023627,uc009mav.1,uc009maw.1_5end | ||
|cluster_id=chr8:73118300..73118311,+ | |||
|description=CAGE_peak_3_at_Isyna1_5end | |description=CAGE_peak_3_at_Isyna1_5end | ||
|id=chr8:73118300..73118311,+ | |id=chr8:73118300..73118311,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.65e-10!23;CL:0000337!2.65e-10!23;CL:0000540!1.60e-07!33;CL:0000047!1.60e-07!33;CL:0000031!1.60e-07!33;CL:0000404!1.60e-07!33 | |ontology_enrichment_celltype=CL:0000117!2.65e-10!23;CL:0000337!2.65e-10!23;CL:0000540!1.60e-07!33;CL:0000047!1.60e-07!33;CL:0000031!1.60e-07!33;CL:0000404!1.60e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.85e-15,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.40e-15!52;UBERON:0005068!1.40e-15!52;UBERON:0006241!1.40e-15!52;UBERON:0007135!1.40e-15!52;UBERON:0001017!8.12e-13!73;UBERON:0005743!8.12e-13!73;UBERON:0000073!4.79e-12!75;UBERON:0001016!4.79e-12!75;UBERON:0002616!1.03e-11!49;UBERON:0000955!3.09e-11!50;UBERON:0006238!3.09e-11!50;UBERON:0002346!5.58e-11!71;UBERON:0003075!5.58e-11!71;UBERON:0007284!5.58e-11!71;UBERON:0007811!8.79e-11!86;UBERON:0000033!2.67e-10!63;UBERON:0000153!5.54e-10!94;UBERON:0003080!8.82e-10!40;UBERON:0003056!1.16e-09!49;UBERON:0002780!4.26e-09!39;UBERON:0001890!4.26e-09!39;UBERON:0006240!4.26e-09!39;UBERON:0002420!4.18e-08!8;UBERON:0007245!4.18e-08!8;UBERON:0010009!4.18e-08!8;UBERON:0010011!4.18e-08!8;UBERON:0000454!4.18e-08!8;UBERON:0002020!4.93e-08!34;UBERON:0004121!1.09e-07!102;UBERON:0000924!1.09e-07!102;UBERON:0006601!1.09e-07!102;UBERON:0003076!3.28e-07!12;UBERON:0003057!3.28e-07!12 | |ontology_enrichment_uberon=UBERON:0001049!1.40e-15!52;UBERON:0005068!1.40e-15!52;UBERON:0006241!1.40e-15!52;UBERON:0007135!1.40e-15!52;UBERON:0001017!8.12e-13!73;UBERON:0005743!8.12e-13!73;UBERON:0000073!4.79e-12!75;UBERON:0001016!4.79e-12!75;UBERON:0002616!1.03e-11!49;UBERON:0000955!3.09e-11!50;UBERON:0006238!3.09e-11!50;UBERON:0002346!5.58e-11!71;UBERON:0003075!5.58e-11!71;UBERON:0007284!5.58e-11!71;UBERON:0007811!8.79e-11!86;UBERON:0000033!2.67e-10!63;UBERON:0000153!5.54e-10!94;UBERON:0003080!8.82e-10!40;UBERON:0003056!1.16e-09!49;UBERON:0002780!4.26e-09!39;UBERON:0001890!4.26e-09!39;UBERON:0006240!4.26e-09!39;UBERON:0002420!4.18e-08!8;UBERON:0007245!4.18e-08!8;UBERON:0010009!4.18e-08!8;UBERON:0010011!4.18e-08!8;UBERON:0000454!4.18e-08!8;UBERON:0002020!4.93e-08!34;UBERON:0004121!1.09e-07!102;UBERON:0000924!1.09e-07!102;UBERON:0006601!1.09e-07!102;UBERON:0003076!3.28e-07!12;UBERON:0003057!3.28e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.85e-15,3;UBERON:0009663,2.85e-15,3;UBERON:0009661,2.85e-15,3;UBERON:0000125,2.85e-15,3;UBERON:0002308,2.85e-15,3;UBERON:0002420,1.08e-12,8;UBERON:0007245,1.08e-12,8;UBERON:0010009,1.08e-12,8;UBERON:0010011,1.08e-12,8;UBERON:0000454,1.08e-12,8;UBERON:0002950,1.04e-11,4;UBERON:0001891,1.04e-11,4;UBERON:0009616,1.04e-11,4;UBERON:0010286,1.04e-11,4;UBERON:0000473,7.07e-08,14;UBERON:0003135,2.17e-07,15;UBERON:0003101,5.79e-07,16;UBERON:0000079,5.79e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0.0797721589953364,0,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0,0.42438965179803,13.7770130044733,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.479227355091182,0,0,0,0.46081959976873,0.527545150920775,0.640413505216868,0.52091337055676,1.11673199600552,1.12552522006336,0.30559649555362,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.898743836428936,0.915001205637253,1.00523481690292,0.347648640384553,0,0.62336413367868,0.486723789203273,0.203678727700633,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0.187403449119458,0,0,0,0.351902248327898,0.43839146485515,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0,148.814935812626,0.448549638131936,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0.13020438484395,0.209718688851422,46.1425670777672,57.894031257831,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0.0797721589953364,0,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0,0.42438965179803,13.7770130044733,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.479227355091182,0,0,0,0.46081959976873,0.527545150920775,0.640413505216868,0.52091337055676,1.11673199600552,1.12552522006336,0.30559649555362,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.898743836428936,0.915001205637253,1.00523481690292,0.347648640384553,0,0.62336413367868,0.486723789203273,0.203678727700633,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0.187403449119458,0,0,0,0.351902248327898,0.43839146485515,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0,148.814935812626,0.448549638131936,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0.13020438484395,0.209718688851422,46.1425670777672,57.894031257831,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p3@Isyna1 | |short_description=p3@Isyna1 | ||
}} | }} |
Latest revision as of 17:39, 25 September 2015
Short description: | p3@Isyna1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Isyna1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -68bp_to_ENSMUST00000019283, NM_023627, uc009mav.1, uc009maw.1_5end |
EntrezGene: | Isyna1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.85e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.85e-15 | 3 |
telencephalic nucleus | 2.85e-15 | 3 |
midbrain nucleus | 2.85e-15 | 3 |
neural nucleus | 2.85e-15 | 3 |
nucleus of brain | 2.85e-15 | 3 |
basal ganglion | 1.08e-12 | 8 |
nuclear complex of neuraxis | 1.08e-12 | 8 |
aggregate regional part of brain | 1.08e-12 | 8 |
collection of basal ganglia | 1.08e-12 | 8 |
cerebral subcortex | 1.08e-12 | 8 |
regional part of midbrain | 1.04e-11 | 4 |
midbrain | 1.04e-11 | 4 |
presumptive midbrain | 1.04e-11 | 4 |
midbrain neural tube | 1.04e-11 | 4 |
testis | 7.07e-08 | 14 |
male reproductive organ | 2.17e-07 | 15 |
male organism | 5.79e-07 | 16 |
male reproductive system | 5.79e-07 | 16 |