FFCP PHASE1:Mm9::chr7:118226122..118226145,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:118226122..118226145,- to FFCP PHASE1:Mm9::chr7:118226122..118226145,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13690 | |EntrezGene=13690 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=150 | |||
|TSSclassifier=NA | |||
|UniProt=F7DAB1 | |UniProt=F7DAB1 | ||
|association_with_transcript=-413bp_to_ENSMUST00000159305_5end | |||
|cluster_id=chr7:118226122..118226145,- | |||
|description=CAGE_peak_13_at_Eif4g2_5end | |||
|id=chr7:118226122..118226145,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.33e-11,3;CL:0000351,2.33e-11,3;CL:0000988,1.50e-10,32;CL:0002032,1.50e-10,32;CL:0000037,1.50e-10,32;CL:0000837,1.50e-10,32;CL:0000838,1.48e-09,12;CL:0000791,2.54e-09,9;CL:0000789,2.54e-09,9;CL:0002420,2.54e-09,9;CL:0002419,2.54e-09,9;CL:0000790,2.54e-09,9;CL:0000034,8.45e-09,97;CL:0000542,8.90e-09,13;CL:0000051,8.90e-09,13;CL:0000738,1.07e-08,17;CL:0002087,1.07e-08,17;CL:0002320,3.99e-08,46;CL:0000134,3.99e-08,46;CL:0000084,1.42e-07,11;CL:0000827,1.42e-07,11;CL:0000624,5.96e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.70e-11,3;UBERON:0000478,1.70e-11,3;UBERON:0000158,1.70e-11,3;UBERON:0000358,2.33e-11,3;UBERON:0000307,2.33e-11,3;UBERON:0007010,2.33e-11,3;UBERON:0001987,1.59e-08,2;UBERON:0003124,1.59e-08,2;UBERON:0004340,1.59e-08,2;UBERON:0002384,3.99e-08,46 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.934450562382103,1.03298658753261,3.66050677594334,5.38348410540585,0,0.159544317990673,0.684802919724823,0.874204024189974,0,0,0,0,0.137114433605739,0,0,0.496454756004426,0,0.47997726838022,0,0.57423196411502,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0.204169356262369,1.67412652294763,0,0.523523743973798,0,0,2.91306211818692,0.377690453926732,0.101376931219515,0.550640256485045,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,1.17447824240415,1.45072428402269,2.01656279485478,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0,0,0.244981598429908,0.0958454710182364,0,0,0,0,0.131886287730194,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0,0.372798891650601,0.454357159999104,0.453429360640713,1.44932244350839,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0,0,0.259786004602869,0,0,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0,0,1.48316980640624,0.722996784599558,0,0,0.441683036920787,0,0,0,0.209446706813455,0.255457055208591,1.1981512450592,2.99951365496704,1.39777249780371,0,0,0.376963056338593,0,0.511430914660661,0.20778804455956,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0,0.408218994907967,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.527853372491847,0,0,1.0447564995665,0.205782136407943,0,0.702213187313235,0.51469581422943,1.70498099637356,0.828503090142008,0.703578179943289,0.180062061461015,0,0,0,0,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,1.3377599609307,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0.486405680325106,0.549122826376163,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,1.08781136763742,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0,9.62154003061212,9.32061111800809,0,0,0.645857706783622,0.301564624640779,0.358117032009409,0.328281799490123,0,0,0.170870880797853,0,0.370389054739423,0.188368457004691,0.136694227721025,0,2.20971958992012,1.53946597556024,1.24379976423981,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0,0.247960367176008,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.469428954583016,0.13020438484395,0.209718688851422,0,0.288030006257865,1.26404448251271,0,0.102710957164827,0.649604114888975,0,0.596044064343795,0.120195449519969,0.590758108698309,0.201932899896295,0.381034033274999,0.604957110821043,0.38983152295901,0.192423683280659,0,0.226730383615211,2.66383144048878,1.88399098879899,5.54019234001459,0,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.31136204275253,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.37456602987953,0.128050304809739,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0,0.182927972872773,0,0.407412341537585,0,0.474540072496697,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.934450562382103,1.03298658753261,3.66050677594334,5.38348410540585,0,0.159544317990673,0.684802919724823,0.874204024189974,0,0,0,0,0.137114433605739,0,0,0.496454756004426,0,0.47997726838022,0,0.57423196411502,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0.204169356262369,1.67412652294763,0,0.523523743973798,0,0,2.91306211818692,0.377690453926732,0.101376931219515,0.550640256485045,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,1.17447824240415,1.45072428402269,2.01656279485478,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0,0,0.244981598429908,0.0958454710182364,0,0,0,0,0.131886287730194,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0,0.372798891650601,0.454357159999104,0.453429360640713,1.44932244350839,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0,0,0.259786004602869,0,0,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0,0,1.48316980640624,0.722996784599558,0,0,0.441683036920787,0,0,0,0.209446706813455,0.255457055208591,1.1981512450592,2.99951365496704,1.39777249780371,0,0,0.376963056338593,0,0.511430914660661,0.20778804455956,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0,0.408218994907967,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.527853372491847,0,0,1.0447564995665,0.205782136407943,0,0.702213187313235,0.51469581422943,1.70498099637356,0.828503090142008,0.703578179943289,0.180062061461015,0,0,0,0,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,1.3377599609307,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0.486405680325106,0.549122826376163,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,1.08781136763742,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0,9.62154003061212,9.32061111800809,0,0,0.645857706783622,0.301564624640779,0.358117032009409,0.328281799490123,0,0,0.170870880797853,0,0.370389054739423,0.188368457004691,0.136694227721025,0,2.20971958992012,1.53946597556024,1.24379976423981,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0,0.247960367176008,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.469428954583016,0.13020438484395,0.209718688851422,0,0.288030006257865,1.26404448251271,0,0.102710957164827,0.649604114888975,0,0.596044064343795,0.120195449519969,0.590758108698309,0.201932899896295,0.381034033274999,0.604957110821043,0.38983152295901,0.192423683280659,0,0.226730383615211,2.66383144048878,1.88399098879899,5.54019234001459,0,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.31136204275253,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.37456602987953,0.128050304809739,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0,0.182927972872773,0,0.407412341537585,0,0.474540072496697,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p13@Eif4g2 | |||
}} | }} |
Latest revision as of 17:49, 25 September 2015
Short description: | p13@Eif4g2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Eif4g2_5end |
Coexpression cluster: | MCL_coexpression_mm9:150 |
Association with transcript: | -413bp_to_ENSMUST00000159305_5end |
EntrezGene: | Eif4g2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.33e-11 | 3 |
trophoblast cell | 2.33e-11 | 3 |
hematopoietic cell | 1.50e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.50e-10 | 32 |
hematopoietic stem cell | 1.50e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.50e-10 | 32 |
lymphoid lineage restricted progenitor cell | 1.48e-09 | 12 |
mature alpha-beta T cell | 2.54e-09 | 9 |
alpha-beta T cell | 2.54e-09 | 9 |
immature T cell | 2.54e-09 | 9 |
mature T cell | 2.54e-09 | 9 |
immature alpha-beta T cell | 2.54e-09 | 9 |
stem cell | 8.45e-09 | 97 |
lymphocyte | 8.90e-09 | 13 |
common lymphoid progenitor | 8.90e-09 | 13 |
leukocyte | 1.07e-08 | 17 |
nongranular leukocyte | 1.07e-08 | 17 |
connective tissue cell | 3.99e-08 | 46 |
mesenchymal cell | 3.99e-08 | 46 |
T cell | 1.42e-07 | 11 |
pro-T cell | 1.42e-07 | 11 |
CD4-positive, alpha-beta T cell | 5.96e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.70e-11 | 3 |
extraembryonic structure | 1.70e-11 | 3 |
membranous layer | 1.70e-11 | 3 |
blastocyst | 2.33e-11 | 3 |
blastula | 2.33e-11 | 3 |
cleaving embryo | 2.33e-11 | 3 |
placenta | 1.59e-08 | 2 |
chorion | 1.59e-08 | 2 |
allantois | 1.59e-08 | 2 |
connective tissue | 3.99e-08 | 46 |