FFCP PHASE1:Mm9::chr5:148672191..148672246,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:148672191..148672246,+
|short_description=p1@Pomp
|description=CAGE_peak_1_at_Pomp_5end
|association_with_transcript=0bp_to_ENSMUST00000031654,NM_025624,uc...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66537 | |EntrezGene=66537 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQT5 | |UniProt=Q9CQT5 | ||
|association_with_transcript=0bp_to_ENSMUST00000031654,NM_025624,uc009aoj.1,uc009aok.1_5end | |||
|cluster_id=chr5:148672191..148672246,+ | |||
|description=CAGE_peak_1_at_Pomp_5end | |||
|id=chr5:148672191..148672246,+ | |||
|ontology_enrichment_celltype=CL:0002371!9.66e-11!118;CL:0000144!1.47e-09!121;CL:0000012!1.47e-09!121;CL:0000548!1.83e-09!115;CL:0000004!1.83e-09!115;CL:0000255!1.83e-09!115;CL:0000117!4.88e-08!23;CL:0000337!4.88e-08!23;CL:0000723!8.30e-08!91;CL:0000048!8.30e-08!91;CL:0000034!2.67e-07!97;CL:0000055!7.94e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.88e-08,23;CL:0000337,4.88e-08,23;CL:0000723,8.30e-08,91;CL:0000048,8.30e-08,91;CL:0000034,2.67e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.08e-09!34;UBERON:0001049!3.61e-09!52;UBERON:0005068!3.61e-09!52;UBERON:0006241!3.61e-09!52;UBERON:0007135!3.61e-09!52;UBERON:0000073!7.48e-09!75;UBERON:0001016!7.48e-09!75;UBERON:0000955!1.38e-08!50;UBERON:0006238!1.38e-08!50;UBERON:0002791!1.66e-08!29;UBERON:0003528!1.66e-08!29;UBERON:0001893!1.66e-08!29;UBERON:0002616!1.81e-08!49;UBERON:0001017!2.97e-08!73;UBERON:0005743!2.97e-08!73;UBERON:0000033!3.43e-08!63;UBERON:0002346!4.00e-08!71;UBERON:0003075!4.00e-08!71;UBERON:0007284!4.00e-08!71;UBERON:0004121!7.25e-08!102;UBERON:0000924!7.25e-08!102;UBERON:0006601!7.25e-08!102;UBERON:0003080!2.99e-07!40;UBERON:0002780!5.38e-07!39;UBERON:0001890!5.38e-07!39;UBERON:0006240!5.38e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.08e-09,34;UBERON:0000073,1.12e-09,54;UBERON:0001049,3.61e-09,52;UBERON:0005068,3.61e-09,52;UBERON:0006241,3.61e-09,52;UBERON:0007135,3.61e-09,52;UBERON:0001016,7.48e-09,75;UBERON:0003528,1.66e-08,29;UBERON:0002791,1.66e-08,29;UBERON:0001893,1.66e-08,29;UBERON:0001017,2.97e-08,73;UBERON:0010314,1.06e-07,92;UBERON:0000955,1.15e-07,47;UBERON:0006238,1.15e-07,47;UBERON:0002616,1.49e-07,46;UBERON:0002050,1.57e-07,294;UBERON:0002346,1.58e-07,64;UBERON:0003075,1.58e-07,64;UBERON:0007284,1.58e-07,64;UBERON:0003080,2.99e-07,40;UBERON:0004121,3.32e-07,95;UBERON:0000924,3.32e-07,95;UBERON:0006601,3.32e-07,95;UBERON:0002780,5.38e-07,39;UBERON:0001890,5.38e-07,39;UBERON:0006240,5.38e-07,39;UBERON:0000923,9.88e-07,291;UBERON:0010316,9.88e-07,291;UBERON:0005291,9.88e-07,291;UBERON:0006598,9.88e-07,291;UBERON:0010317,9.88e-07,291;UBERON:0002532,9.88e-07,291 | |||
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|short_description=p1@Pomp | |||
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Latest revision as of 18:19, 25 September 2015
Short description: | p1@Pomp |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pomp_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000031654, NM_025624, uc009aoj.1, uc009aok.1_5end |
EntrezGene: | Pomp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.88e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.88e-08 | 23 |
somatic stem cell | 8.30e-08 | 91 |
multi fate stem cell | 8.30e-08 | 91 |
stem cell | 2.67e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.08e-09 | 34 |
regional part of nervous system | 1.12e-09 | 54 |
neural tube | 3.61e-09 | 52 |
neural rod | 3.61e-09 | 52 |
future spinal cord | 3.61e-09 | 52 |
neural keel | 3.61e-09 | 52 |
nervous system | 7.48e-09 | 75 |
brain grey matter | 1.66e-08 | 29 |
regional part of telencephalon | 1.66e-08 | 29 |
telencephalon | 1.66e-08 | 29 |
central nervous system | 2.97e-08 | 73 |
structure with developmental contribution from neural crest | 1.06e-07 | 92 |
brain | 1.15e-07 | 47 |
future brain | 1.15e-07 | 47 |
regional part of brain | 1.49e-07 | 46 |
embryonic structure | 1.57e-07 | 294 |
neurectoderm | 1.58e-07 | 64 |
neural plate | 1.58e-07 | 64 |
presumptive neural plate | 1.58e-07 | 64 |
anterior neural tube | 2.99e-07 | 40 |
ectoderm-derived structure | 3.32e-07 | 95 |
ectoderm | 3.32e-07 | 95 |
presumptive ectoderm | 3.32e-07 | 95 |
regional part of forebrain | 5.38e-07 | 39 |
forebrain | 5.38e-07 | 39 |
future forebrain | 5.38e-07 | 39 |
germ layer | 9.88e-07 | 291 |
germ layer / neural crest | 9.88e-07 | 291 |
embryonic tissue | 9.88e-07 | 291 |
presumptive structure | 9.88e-07 | 291 |
germ layer / neural crest derived structure | 9.88e-07 | 291 |
epiblast (generic) | 9.88e-07 | 291 |