FFCP PHASE1:Mm9::chr8:74763951..74764080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11767 | |EntrezGene=11767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1410 | |MCL_coexpression_id=1410 | ||
|TSSclassifier=NA | |||
|UniProt=P35585,Q3UG16 | |UniProt=P35585,Q3UG16 | ||
|association_with_transcript=0bp_to_ENSMUST00000145213,NM_007456,uc009mfp.1_5end | |association_with_transcript=0bp_to_ENSMUST00000145213,NM_007456,uc009mfp.1_5end | ||
|cluster_id=chr8:74763951..74764080,+ | |||
|description=CAGE_peak_1_at_Ap1m1_5end | |description=CAGE_peak_1_at_Ap1m1_5end | ||
|id=chr8:74763951..74764080,+ | |id=chr8:74763951..74764080,+ | ||
|ontology_enrichment_celltype=CL:0002319!6.89e-13!43;CL:0000221!3.69e-12!44;CL:0000133!3.69e-12!44;CL:0000117!1.25e-11!23;CL:0000337!1.25e-11!23;CL:0000055!7.02e-09!50;CL:0000540!2.64e-08!33;CL:0000047!2.64e-08!33;CL:0000031!2.64e-08!33;CL:0000404!2.64e-08!33;CL:0000034!4.57e-08!97;CL:0000723!6.40e-08!91;CL:0000048!6.40e-08!91 | |ontology_enrichment_celltype=CL:0002319!6.89e-13!43;CL:0000221!3.69e-12!44;CL:0000133!3.69e-12!44;CL:0000117!1.25e-11!23;CL:0000337!1.25e-11!23;CL:0000055!7.02e-09!50;CL:0000540!2.64e-08!33;CL:0000047!2.64e-08!33;CL:0000031!2.64e-08!33;CL:0000404!2.64e-08!33;CL:0000034!4.57e-08!97;CL:0000723!6.40e-08!91;CL:0000048!6.40e-08!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.89e-13,43;CL:0000221,3.69e-12,44;CL:0000133,3.69e-12,44;CL:0000117,1.25e-11,23;CL:0000337,1.25e-11,23;CL:0000540,2.64e-08,33;CL:0000047,2.64e-08,33;CL:0000031,2.64e-08,33;CL:0000404,2.64e-08,33;CL:0000034,4.57e-08,97;CL:0000723,6.40e-08,91;CL:0000048,6.40e-08,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.31e-14!75;UBERON:0001016!1.31e-14!75;UBERON:0001017!9.05e-14!73;UBERON:0005743!9.05e-14!73;UBERON:0001049!3.98e-12!52;UBERON:0005068!3.98e-12!52;UBERON:0006241!3.98e-12!52;UBERON:0007135!3.98e-12!52;UBERON:0002020!2.03e-10!34;UBERON:0002616!1.18e-09!49;UBERON:0000955!1.81e-09!50;UBERON:0006238!1.81e-09!50;UBERON:0002346!6.12e-09!71;UBERON:0003075!6.12e-09!71;UBERON:0007284!6.12e-09!71;UBERON:0003080!2.53e-08!40;UBERON:0002780!5.18e-08!39;UBERON:0001890!5.18e-08!39;UBERON:0006240!5.18e-08!39;UBERON:0002791!6.40e-08!29;UBERON:0003528!6.40e-08!29;UBERON:0001893!6.40e-08!29;UBERON:0004121!7.62e-08!102;UBERON:0000924!7.62e-08!102;UBERON:0006601!7.62e-08!102;UBERON:0003056!1.11e-07!49;UBERON:0007811!3.24e-07!86;UBERON:0000033!6.44e-07!63 | |ontology_enrichment_uberon=UBERON:0000073!1.31e-14!75;UBERON:0001016!1.31e-14!75;UBERON:0001017!9.05e-14!73;UBERON:0005743!9.05e-14!73;UBERON:0001049!3.98e-12!52;UBERON:0005068!3.98e-12!52;UBERON:0006241!3.98e-12!52;UBERON:0007135!3.98e-12!52;UBERON:0002020!2.03e-10!34;UBERON:0002616!1.18e-09!49;UBERON:0000955!1.81e-09!50;UBERON:0006238!1.81e-09!50;UBERON:0002346!6.12e-09!71;UBERON:0003075!6.12e-09!71;UBERON:0007284!6.12e-09!71;UBERON:0003080!2.53e-08!40;UBERON:0002780!5.18e-08!39;UBERON:0001890!5.18e-08!39;UBERON:0006240!5.18e-08!39;UBERON:0002791!6.40e-08!29;UBERON:0003528!6.40e-08!29;UBERON:0001893!6.40e-08!29;UBERON:0004121!7.62e-08!102;UBERON:0000924!7.62e-08!102;UBERON:0006601!7.62e-08!102;UBERON:0003056!1.11e-07!49;UBERON:0007811!3.24e-07!86;UBERON:0000033!6.44e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.31e-14,75;UBERON:0001017,9.05e-14,73;UBERON:0001049,3.98e-12,52;UBERON:0005068,3.98e-12,52;UBERON:0006241,3.98e-12,52;UBERON:0007135,3.98e-12,52;UBERON:0000073,4.42e-12,54;UBERON:0002346,4.56e-11,64;UBERON:0003075,4.56e-11,64;UBERON:0007284,4.56e-11,64;UBERON:0002020,2.03e-10,34;UBERON:0002616,1.90e-09,46;UBERON:0004121,2.52e-09,95;UBERON:0000924,2.52e-09,95;UBERON:0006601,2.52e-09,95;UBERON:0000955,2.97e-09,47;UBERON:0006238,2.97e-09,47;UBERON:0003080,2.53e-08,40;UBERON:0010314,3.32e-08,92;UBERON:0002780,5.18e-08,39;UBERON:0001890,5.18e-08,39;UBERON:0006240,5.18e-08,39;UBERON:0003528,6.40e-08,29;UBERON:0002791,6.40e-08,29;UBERON:0001893,6.40e-08,29;UBERON:0003056,1.11e-07,49;UBERON:0010371,5.92e-07,73 | |||
|phase1_expression=26.424559772291,28.2670080187882,31.394947517878,29.3390284967625,25.0447864973174,16.2842893754533,17.2873354040689,71.921691156958,15.4867594366833,23.1723881058774,24.6553874244727,23.4530147446289,41.4305766433518,58.9213512304042,39.6400616560639,39.6851524084059,39.1754651751762,74.7645331899023,73.2191075454645,81.9072027970198,74.6680087526393,38.7234709683453,42.0531660513686,29.1186209484,27.2997044469932,18.9496548157957,19.8150518233174,20.0388246397877,22.4227634958521,15.3738379153558,18.8470934057009,48.262331182932,47.3599886440119,31.6963362030877,10.3986583110459,11.3039558843775,8.37094360675713,149.415792173076,112.512289611427,135.592649689214,165.293048136715,160.515688965235,136.913919554785,25.6829508670178,21.6946632809761,27.3484660720905,79.021525779152,80.6693078607652,60.6333864347142,52.3016428509822,51.2350303148827,116.439577135627,61.4084338171315,37.7188313845899,41.6756310936655,31.9001700684574,32.6648121530183,26.2992767061496,89.4238756999422,98.3923221445981,94.4408791224207,57.6035704517525,42.6861502133347,62.5430303510572,51.4210508534827,78.152812644071,56.9240209984969,80.3016258122049,66.5687311020427,71.4181413774644,62.4665135213605,76.2688128358156,85.2552568073228,66.634994772935,75.3345402203338,82.7296907949019,31.9336054898227,50.0534365293936,42.5490097119794,97.3320803448831,109.510709392084,101.578107258568,58.9076127892914,51.7741601229146,48.1314480496952,67.1753174879962,67.9112917411721,79.5925633674033,53.1597877198952,57.2076710008366,34.4938741554997,24.0918685554788,25.8389106808945,30.2233787317178,18.8435161059824,18.8171292580881,38.2008822758365,38.8581135477972,37.668970667416,43.8141072392822,26.6194063377926,19.2489716121477,20.3844191765317,0,10.1750789275271,10.1343946190039,7.58286667522175,35.2828188331895,61.1093405407325,24.0476265285016,39.7281398294451,31.9688752227748,33.2086316048724,26.2257394561563,27.5157574697549,29.4059823711441,44.2478992244529,39.331025082216,54.8458542208922,29.7651003903233,34.0095938429006,37.3353944914121,27.9587641827183,33.0842300623048,33.0925796765259,22.9911349687732,41.2164028300366,31.1949420116572,42.5685260694767,49.4309110035915,41.1750542536764,89.2145900001337,38.7628234028777,37.5901722275586,45.7133698031032,39.5868681885329,38.0879220800183,36.9488702711976,13.1415834385511,25.4634645622634,40.857819090289,44.1412040512268,42.8547868936731,33.4564695595287,38.9168775145595,35.7437279594731,40.760250183482,27.6812606690747,40.95791865724,30.8242910673545,34.31046921197,28.0570537507296,26.6925359256574,26.8154168222068,22.6360350048738,32.8406540250514,47.0482835499867,44.5211879308457,51.1494298912067,34.5900040134288,44.5599513964083,34.5719158005149,40.4833497850709,49.7813506320932,41.0350520280426,40.9259742760718,37.0217293931474,40.8678698285093,39.6589238291488,46.2952248703049,37.8591340579146,39.4739966048397,33.1520674089486,35.4304945527381,39.5345103300559,63.4921458380185,31.059365600477,23.2716498663919,31.9932375802851,28.5651106388339,30.6704557946582,29.445794595008,34.6909748397998,38.6158021008495,25.6245693234036,33.9279846731462,31.4169011000337,35.2152955512837,34.118715245846,26.0657628509724,21.6138049874694,24.2952353370328,46.468635733505,31.7610865055046,37.1935527721165,29.1221398818799,33.9416852543345,30.2986741926176,31.3653224136316,28.6363687080428,22.4508180813166,22.8284753255331,18.0836102523161,35.3711624118119,42.0636249542254,39.3508696673494,34.4862206360455,38.3471684006343,31.8282314726775,37.975890143507,37.6153726118082,43.1061418705288,27.3159592401974,38.3305176098558,43.3732365629239,25.0053089167641,27.6272016823745,31.8412724099822,42.8627401186523,31.8345571774414,33.2448551941733,27.1592137240301,23.2343345805617,33.668757745805,34.278284287586,35.7094575579772,37.3595291531673,36.7631384816966,34.4422300300172,33.9197061461578,33.155516518252,31.388845712188,37.6978209848181,69.6199275287948,33.9317348383135,29.8011686009111,51.3761887960934,45.9469811441436,33.9345336929718,20.4501451035542,35.0214123552045,34.3586094981042,36.406554216843,37.2791324805981,30.7462170233704,30.2891887944051,40.8858808691643,35.3629588072687,34.3900366813475,33.7387382242897,30.2332381493612,50.0364346304987,35.1835832203724,33.8188752093698,11.9470624505967,27.9197731578229,25.0928552280743,18.6719028958339,32.7785101097658,26.4394227231778,26.876542489495,29.4462320876779,21.3898427030833,24.6508671189936,11.5960469432499,17.5330423521918,28.2564872775644,34.9318522420742,46.3104087942261,43.08174404135,32.0985822892515,39.7762463252617,43.4409414389599,39.8849083340125,34.4967410853654,19.0648863777438,13.8932890774626,12.5313552235525,23.2508774442104,23.4617277970526,21.6063942645677,17.0706535734864,32.3543728659134,44.5020724825223,45.6225251730267,37.7687968372697,41.113185076076,38.427165228957,47.8429797023588,44.6117437752719,50.8235505681627,52.2018917167244,55.8327894169872,21.9574242143476,39.7001671944325,29.48132273339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| ||
|short_description=p1@Ap1m1 | |short_description=p1@Ap1m1 | ||
}} | }} |
Latest revision as of 18:51, 25 September 2015
Short description: | p1@Ap1m1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ap1m1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1410 |
Association with transcript: | 0bp_to_ENSMUST00000145213, NM_007456, uc009mfp.1_5end |
EntrezGene: | Ap1m1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.89e-13 | 43 |
ectodermal cell | 3.69e-12 | 44 |
neurectodermal cell | 3.69e-12 | 44 |
CNS neuron (sensu Vertebrata) | 1.25e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.25e-11 | 23 |
neuron | 2.64e-08 | 33 |
neuronal stem cell | 2.64e-08 | 33 |
neuroblast | 2.64e-08 | 33 |
electrically signaling cell | 2.64e-08 | 33 |
stem cell | 4.57e-08 | 97 |
somatic stem cell | 6.40e-08 | 91 |
multi fate stem cell | 6.40e-08 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.31e-14 | 75 |
central nervous system | 9.05e-14 | 73 |
neural tube | 3.98e-12 | 52 |
neural rod | 3.98e-12 | 52 |
future spinal cord | 3.98e-12 | 52 |
neural keel | 3.98e-12 | 52 |
regional part of nervous system | 4.42e-12 | 54 |
neurectoderm | 4.56e-11 | 64 |
neural plate | 4.56e-11 | 64 |
presumptive neural plate | 4.56e-11 | 64 |
gray matter | 2.03e-10 | 34 |
regional part of brain | 1.90e-09 | 46 |
ectoderm-derived structure | 2.52e-09 | 95 |
ectoderm | 2.52e-09 | 95 |
presumptive ectoderm | 2.52e-09 | 95 |
brain | 2.97e-09 | 47 |
future brain | 2.97e-09 | 47 |
anterior neural tube | 2.53e-08 | 40 |
structure with developmental contribution from neural crest | 3.32e-08 | 92 |
regional part of forebrain | 5.18e-08 | 39 |
forebrain | 5.18e-08 | 39 |
future forebrain | 5.18e-08 | 39 |
brain grey matter | 6.40e-08 | 29 |
regional part of telencephalon | 6.40e-08 | 29 |
telencephalon | 6.40e-08 | 29 |
pre-chordal neural plate | 1.11e-07 | 49 |
ecto-epithelium | 5.92e-07 | 73 |