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FFCP PHASE1:Mm9::chr10:127896346..127896384,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68094
|EntrezGene=68094
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q6PDG5,Q3UID0
|UniProt=Q6PDG5,Q3UID0
|association_with_transcript=54bp_to_ENSMUST00000026433,ENSMUST00000099131,ENSMUST00000105235,NM_001114096,NM_001114097,NM_198160,uc007hmw.2,uc007hmx.2,uc007hmy.2_5end
|association_with_transcript=54bp_to_ENSMUST00000026433,ENSMUST00000099131,ENSMUST00000105235,NM_001114096,NM_001114097,NM_198160,uc007hmw.2,uc007hmx.2,uc007hmy.2_5end
|cluster_id=chr10:127896346..127896384,+
|description=CAGE_peak_1_at_Smarcc2_5end
|description=CAGE_peak_1_at_Smarcc2_5end
|id=chr10:127896346..127896384,+
|id=chr10:127896346..127896384,+
|ontology_enrichment_celltype=CL:0000117!5.38e-10!23;CL:0000337!5.38e-10!23
|ontology_enrichment_celltype=CL:0000117!5.38e-10!23;CL:0000337!5.38e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.38e-10,23;CL:0000337,5.38e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.06e-10!52;UBERON:0005068!1.06e-10!52;UBERON:0006241!1.06e-10!52;UBERON:0007135!1.06e-10!52;UBERON:0000955!7.73e-10!50;UBERON:0006238!7.73e-10!50;UBERON:0002616!2.36e-09!49;UBERON:0000033!4.77e-09!63;UBERON:0001017!5.30e-09!73;UBERON:0005743!5.30e-09!73;UBERON:0002020!9.94e-09!34;UBERON:0000073!2.24e-08!75;UBERON:0001016!2.24e-08!75;UBERON:0002346!3.65e-08!71;UBERON:0003075!3.65e-08!71;UBERON:0007284!3.65e-08!71;UBERON:0003080!4.40e-08!40;UBERON:0004121!5.36e-08!102;UBERON:0000924!5.36e-08!102;UBERON:0006601!5.36e-08!102;UBERON:0002780!1.12e-07!39;UBERON:0001890!1.12e-07!39;UBERON:0006240!1.12e-07!39;UBERON:0003056!1.16e-07!49;UBERON:0002791!1.47e-07!29;UBERON:0003528!1.47e-07!29;UBERON:0001893!1.47e-07!29
|ontology_enrichment_uberon=UBERON:0001049!1.06e-10!52;UBERON:0005068!1.06e-10!52;UBERON:0006241!1.06e-10!52;UBERON:0007135!1.06e-10!52;UBERON:0000955!7.73e-10!50;UBERON:0006238!7.73e-10!50;UBERON:0002616!2.36e-09!49;UBERON:0000033!4.77e-09!63;UBERON:0001017!5.30e-09!73;UBERON:0005743!5.30e-09!73;UBERON:0002020!9.94e-09!34;UBERON:0000073!2.24e-08!75;UBERON:0001016!2.24e-08!75;UBERON:0002346!3.65e-08!71;UBERON:0003075!3.65e-08!71;UBERON:0007284!3.65e-08!71;UBERON:0003080!4.40e-08!40;UBERON:0004121!5.36e-08!102;UBERON:0000924!5.36e-08!102;UBERON:0006601!5.36e-08!102;UBERON:0002780!1.12e-07!39;UBERON:0001890!1.12e-07!39;UBERON:0006240!1.12e-07!39;UBERON:0003056!1.16e-07!49;UBERON:0002791!1.47e-07!29;UBERON:0003528!1.47e-07!29;UBERON:0001893!1.47e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.06e-10,52;UBERON:0005068,1.06e-10,52;UBERON:0006241,1.06e-10,52;UBERON:0007135,1.06e-10,52;UBERON:0000073,1.39e-10,54;UBERON:0010371,9.43e-10,73;UBERON:0000955,1.74e-09,47;UBERON:0006238,1.74e-09,47;UBERON:0002346,2.02e-09,64;UBERON:0003075,2.02e-09,64;UBERON:0007284,2.02e-09,64;UBERON:0001017,5.30e-09,73;UBERON:0002616,5.31e-09,46;UBERON:0004121,6.86e-09,95;UBERON:0000924,6.86e-09,95;UBERON:0006601,6.86e-09,95;UBERON:0002020,9.94e-09,34;UBERON:0001016,2.24e-08,75;UBERON:0003080,4.40e-08,40;UBERON:0002780,1.12e-07,39;UBERON:0001890,1.12e-07,39;UBERON:0006240,1.12e-07,39;UBERON:0003056,1.16e-07,49;UBERON:0003528,1.47e-07,29;UBERON:0002791,1.47e-07,29;UBERON:0001893,1.47e-07,29;UBERON:0010314,5.54e-07,92
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85,30.997532815857,30.9450678101414,32.3176594344343,40.7290326082159,46.2032817504628,30.8872011541155,40.5694866403312,47.2217877946063,9.01908701894705,30.6508919390157,21.3441452689656,38.8902376688095,25.7028048720685,31.7637515922663,35.6766005483092,47.003782928666,34.1841462827817,19.8098979077325,21.0261904568242,29.0730230977924,24.1243006195295,26.3967159913606,21.0471733224028,27.9281645241271,27.020664250252,33.1739440675114,37.8085189566918,38.8720832300368,31.3209975352049,36.7007313898099,41.4195993143948,34.8286866737993,42.1925616875464,30.1551410208231,7.32553646134413,6.6388253891012,10.744615447301,36.1264540840196,36.7857651884317,39.7439024659965,28.7253627965948,50.1572104035363,51.9571695207701,43.2705722316746,34.9466263198032,42.2758828565471,36.309373547844,34.7481192799262,41.1763725141402,31.5224842256954,35.7982503097522,39.8675440048901,24.9089634202024,53.4693330357382,28.6832457666945,36.2229008431758,31.0227480689414,31.2533964365024,34.2259960814487,29.6690482424008,31.7710017495897,37.6518845528058,30.1640366869385,34.8958731564241,37.0820369580734,44.7535815310036,48.0734875158483,41.9138448329105,46.7013833557768,46.6840313522166,43.2690195843472,34.444547311449,29.4867557051457,36.2050644565049,38.8650989614133,36.3366041580821,39.0553928723622,38.7534904143878,36.0368106559362,43.6695720986819,38.5683683322247,21.3234063229941,40.4545411803434,40.7808557034833,45.4246457918355,41.5230734378389,34.7231899766054,44.7160934508923,29.7093142725669,40.6106292151284,31.1799981272215,31.5445729340907,31.9977613156182
|phase1_expression=32.5102159622732,26.1731555729521,19.5649672937501,31.1538137646035,33.5600139064053,28.2037176811975,22.660426137766,32.6682008307188,20.9775196005983,20.8317428426574,17.1217968225505,16.9116977070113,41.2593759134206,40.5630667224148,21.3190247562024,33.8133696541009,26.5833513688696,35.1740314374435,32.3590063309544,39.8926272690148,35.5480952831472,18.3688259721638,16.194386926614,21.5989770771099,16.0586496747019,28.711598205751,17.230479846363,22.6244794320183,30.7837939519326,28.983464922392,16.8515188098032,11.4305521222734,12.3012957516914,0,18.4865036640816,15.9585259544153,16.9460565697766,33.9010620896895,26.5654017138092,41.3583757739301,40.58797267414,33.4692287629638,42.7249110667415,53.002560367718,53.6283966151232,49.1905295793307,34.4252191513137,23.1106665763273,27.460772841809,32.6642230444796,29.3971485413261,21.5628846547457,38.9255646053948,42.7963663786693,29.5762543245368,21.8670520630555,30.659078073447,28.3619650752593,76.2733057440684,86.2255296213414,53.8756692980252,22.7025836486319,17.7858959222228,29.6966906702862,36.5880554149781,26.2877642530057,24.8668091730276,26.1268447618657,73.7233143513276,65.7478919675333,69.4072372459561,39.7054868321287,38.6519946665324,76.6792403085612,97.9540713806376,66.1837526359215,29.731287869835,50.6918732198195,45.6211403771043,96.1451037553113,112.529801630964,89.5970997357627,36.8521558681823,39.9561453122493,48.7426410408024,40.0694876244188,54.6707254268555,75.678175005072,15.7510482133023,35.2163470097621,47.5377761470752,17.2084775396277,4.0798280022465,13.4925797909454,16.2444104361917,21.0572636935748,26.8248842451646,63.4000799990375,47.0212668331192,43.8141072392822,31.5489260299764,79.562415996877,58.6052051325285,28.4426681261332,9.74209684550464,16.7217511213565,12.1325866803548,26.8332117339791,92.1818865783931,42.0091253553454,27.4106816290495,18.5723941770406,25.3677046981664,27.4315205805773,37.1580314548827,42.8523076434193,31.1465659345311,61.4547266909625,32.7305904221453,41.897614136379,39.7514733228708,42.1841470227643,31.6865994070808,79.9291575841524,87.1298300343973,39.8513006125403,14.0183695671927,9.59844369589452,12.4528822531603,50.7790267582349,33.8550446085784,73.7591046902514,50.5828771759525,46.0287823194595,45.0900056694245,51.5927216555469,35.4400986199101,36.9488702711976,32.8539585963777,42.0883711772948,26.804811250317,16.0931473103431,27.3694437304131,37.0733851875859,46.4008924212056,45.6084844214065,38.698812243168,48.3775303281959,23.0657752438141,34.7955187508787,33.6066647153142,26.7418793561641,42.2631818822909,34.1287123191723,39.0986059175093,31.6464484241404,7.72434506044558,11.5806558201622,10.7982129770325,27.1334762021507,26.5014447778639,27.7295574649963,36.6954340157076,33.2531551653112,32.5503608192368,42.3211779445742,34.8755421819505,43.4367073605871,47.5577966249959,43.011875588723,46.5334966793212,38.8891966551384,33.3716175242397,40.5303384656323,56.147416266622,72.4448471150162,35.0243909962826,24.5939026997096,29.6470668243975,40.6414175755767,28.2219740295384,27.4289593487746,23.7944506914011,26.0609107774206,33.2170343081158,24.0460473897056,35.438264440838,39.9902508802713,49.9108063024948,36.8515957548231,42.5791958253148,40.8239610171453,20.6738012038859,26.2771579002376,13.5249282807697,30.9550018324878,24.6319658702885,36.540762162856,43.759683689986,45.6115357256971,34.8537175807852,31.3428796361373,19.5658733877518,20.5219480030796,22.8008434331315,20.2375901146368,22.5174734741238,22.1882986972223,18.5876871800436,23.3033871335157,26.1037715107807,24.7105271869273,50.3188722845741,23.0727387554472,21.2185617717901,34.6033062787543,19.9131129009323,27.9817242390753,54.1326847188152,21.4125295300648,32.5929952884052,33.4397818977121,37.3157494778718,41.5415518455703,30.7076296742958,45.8564072465827,46.187097223114,51.3798079985158,59.9549930152152,51.7808074501732,53.8777143421594,53.9540988509038,49.7611236999598,39.7051149187658,29.0140921081231,49.3926775885471,44.6330640166062,47.2363096966579,26.5574611510214,41.6577029887215,27.4492150892143,27.7211508450613,36.1911308191102,30.1100685420216,31.6374117197,33.4030306330822,41.2906915708392,23.9649803487276,36.3664755710802,59.1231222216125,44.8530669258129,36.8595799591218,37.7897745700296,51.140738121486,35.84118735179,29.3764569747528,29.9300321395104,34.3261245155735,42.5234725748313,31.9732553861685,41.0900986137472,48.3499860205082,56.326585784786,49.3017342379873,42.1674434299995,50.5364161916116,36.0865982099015,34.0315467719176,38.6782464510436,41.3670477610973,39.0148514013002,37.992558149241,35.8716864912624,28.9241701658869,25.109872762817,27.7500012831604,49.3983611643115,44.6841745471411,46.5017548884208,45.5965712456858,36.5279372649598,32.6640390492672,39.6413937816597,54.1441881870688,32.8072091131877,37.3560231013433,25.3716502496505,40.3108497990039,48.799839296406,31.1138315560871,22.4371527591889,26.0309701322004,20.3153961492503,31.5041303944987,27.9957354319305,35.5809067471985,30.997532815857,30.9450678101414,32.3176594344343,40.7290326082159,46.2032817504628,30.8872011541155,40.5694866403312,47.2217877946063,9.01908701894705,30.6508919390157,21.3441452689656,38.8902376688095,25.7028048720685,31.7637515922663,35.6766005483092,47.003782928666,34.1841462827817,19.8098979077325,21.0261904568242,29.0730230977924,24.1243006195295,26.3967159913606,21.0471733224028,27.9281645241271,27.020664250252,33.1739440675114,37.8085189566918,38.8720832300368,31.3209975352049,36.7007313898099,41.4195993143948,34.8286866737993,42.1925616875464,30.1551410208231,7.32553646134413,6.6388253891012,10.744615447301,36.1264540840196,36.7857651884317,39.7439024659965,28.7253627965948,50.1572104035363,51.9571695207701,43.2705722316746,34.9466263198032,42.2758828565471,36.309373547844,34.7481192799262,41.1763725141402,31.5224842256954,35.7982503097522,39.8675440048901,24.9089634202024,53.4693330357382,28.6832457666945,36.2229008431758,31.0227480689414,31.2533964365024,34.2259960814487,29.6690482424008,31.7710017495897,37.6518845528058,30.1640366869385,34.8958731564241,37.0820369580734,44.7535815310036,48.0734875158483,41.9138448329105,46.7013833557768,46.6840313522166,43.2690195843472,34.444547311449,29.4867557051457,36.2050644565049,38.8650989614133,36.3366041580821,39.0553928723622,38.7534904143878,36.0368106559362,43.6695720986819,38.5683683322247,21.3234063229941,40.4545411803434,40.7808557034833,45.4246457918355,41.5230734378389,34.7231899766054,44.7160934508923,29.7093142725669,40.6106292151284,31.1799981272215,31.5445729340907,31.9977613156182
|short_description=p1@Smarcc2
|short_description=p1@Smarcc2
}}
}}

Latest revision as of 18:59, 25 September 2015

Short description:p1@Smarcc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smarcc2_5end
Coexpression cluster:NA
Association with transcript: 54bp_to_ENSMUST00000026433, ENSMUST00000099131, ENSMUST00000105235, NM_001114096, NM_001114097, NM_198160, uc007hmw.2, uc007hmx.2, uc007hmy.2_5end
EntrezGene:Smarcc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smarcc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G732.51
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I331.15
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I728.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.66
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E441.26
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E840.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A333.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A526.58
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A235.17
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A639.89
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.06
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I117.23
GP2+ M cell, pool3.CNhs13240.11847-124I222.62
Ileum epithelium, pool1.CNhs13199.10252-104B930.78
Ileum epithelium, pool2.CNhs13232.10253-104C128.98
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G833.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H126.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H341.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G940.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H233.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H442.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D853.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D953.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B349.19
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B734.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.11
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.46
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C332.66
Mouse Astrocytes, donor2.CNhs12078.11552-120C429.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A238.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I942.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A129.58
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.87
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E130.66
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C528.36
Mouse Granule cells, donor1.CNhs12131.11713-123C376.27
Mouse Granule cells, donor2.CNhs12357.11731-123E386.23
Mouse Granule cells, donor3.CNhs12108.11636-122C753.88
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.70
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C729.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E736.59
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C824.87
Mouse Microglia, donor2.CNhs12634.11736-123E826.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D573.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F565.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D969.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F139.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D538.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D276.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F297.95
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D666.18
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F350.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D745.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D496.15
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4112.53
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D889.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.85
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E175.68
Mouse Schwann, donor1.CNhs12507.11728-123D915.75
Mouse Schwann, donor2.CNhs12573.11746-123F935.22
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G347.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I763.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E347.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I843.81
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H179.56
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I858.61
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.72
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.83
accessory axillary lymph node, adult.CNhs10475.1063-29H992.18
adrenal gland, adult.CNhs10508.49-24D742.01
adrenal gland, embryo E14.CNhs11038.406-44C527.41
adrenal gland, embryo E16.CNhs11004.1254-43D618.57
adrenal gland, embryo E17.CNhs11043.1263-45I125.37
adrenal gland, embryo E18.CNhs11026.1262-18F527.43
adrenal gland, neonate N00.CNhs11191.1311-23C137.16
adrenal gland, neonate N25.CNhs11223.1377-27I342.85
amnion, adult pregnant day17.5.CNhs10488.583-22A831.15
aorta, adult.CNhs10498.46-23H161.45
bone (os femoris), adult.CNhs10483.56-12G232.73
bone (os femoris), neonate N02.CNhs11227.1985-43F541.90
bone (os femoris), neonate N16.CNhs11225.1525-43A639.75
bone (os femoris), neonate N20.CNhs11195.1350-25C342.18
cecum, adult.CNhs10467.37-13H431.69
cerebellum, adult.CNhs10494.15-8B279.93
cerebellum, neonate N30.CNhs11135.1395-42I287.13
colon, adult.CNhs10468.36-18H739.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.02
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.45
corpora quadrigemina, adult.CNhs10501.16-22A450.78
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F173.76
cortex, adult.CNhs10473.12-14D550.58
cortex, neonate N30.CNhs11107.1392-42F246.03
diencephalon, adult.CNhs10482.20-12F245.09
diencephalon, neonate N30.CNhs11201.1388-42B251.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B135.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A236.95
epididymis, adult.CNhs10490.58-23B232.85
eyeball, adult.CNhs10484.31-12G442.09
eyeball, embryo E12.CNhs11016.345-16C626.80
eyeball, embryo E14.CNhs10521.399-16E216.09
eyeball, embryo E15.CNhs10593.426-16C927.37
eyeball, embryo E17.CNhs11023.1261-18D437.07
eyeball, neonate N00.CNhs11207.633-15C646.40
eyeball, neonate N01.CNhs11140.1532-43E745.61
eyeball, neonate N02.CNhs11205.1551-44G838.70
eyeball, neonate N16.CNhs11188.777-19A248.38
forelimb, embryo E11.CNhs10596.335-25E223.07
forelimb, embryo E12.CNhs10600.359-14H234.80
forelimb, embryo E13.CNhs10589.384-1E233.61
forelimb, embryo E14.CNhs10577.413-26A826.74
forelimb, embryo E15.CNhs11007.437-20E742.26
forelimb, embryo E17.CNhs10598.1517-43C434.13
forelimb, embryo E18.CNhs11008.1520-43B539.10
gonad, embryo E13.CNhs11044.1564-45I631.65
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E927.13
heart, embryo E12.CNhs11015.353-12F526.50
heart, embryo E13.CNhs11013.376-3I927.73
heart, embryo E14.CNhs10597.403-26D436.70
heart, embryo E15.CNhs11017.431-16C833.25
heart, embryo E16.CNhs11021.457-17C632.55
heart, embryo E17.CNhs11025.479-18E542.32
heart, embryo E18.CNhs11030.1283-20G334.88
heart, neonate N00.CNhs11213.639-21E343.44
heart, neonate N03.CNhs11221.1349-25I247.56
heart, neonate N10.CNhs11118.749-24G143.01
heart, neonate N16.CNhs11209.782-15G146.53
heart, neonate N20.CNhs11127.821-26I638.89
heart, neonate N25.CNhs11196.1351-25D333.37
heart, neonate N30.CNhs11202.1390-42D240.53
hippocampus, adult.CNhs10478.13-16E856.15
hippocampus, neonate N00.CNhs11228.627-43G172.44
intestinal mucosa, adult.CNhs10506.860-29I335.02
intestine, adult.CNhs10496.178-9A324.59
intestine, embryo E12.CNhs11019.1251-16I529.65
intestine, embryo E13.CNhs11010.381-16D540.64
intestine, embryo E15.CNhs10602.976-16D828.22
intestine, embryo E16.CNhs10585.463-22H427.43
intestine, embryo E17.CNhs10582.482-18D323.79
intestine, embryo E18.CNhs10526.1289-20F726.06
intestine, neonate N00.CNhs11126.644-26D133.22
intestine, neonate N01.CNhs11192.1322-23E924.05
intestine, neonate N06.CNhs11102.688-20B835.44
intestine, neonate N07.CNhs11095.720-20F239.99
intestine, neonate N10.CNhs11098.755-23A549.91
intestine, neonate N20.CNhs11187.827-18D136.85
intestine, neonate N25.CNhs11121.1352-25E342.58
intestine, neonate N30.CNhs11131.1384-42G140.82
kidney, embryo E14.CNhs10606.411-4I920.67
kidney, embryo E15.CNhs10997.434-16F826.28
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I230.96
kidney, embryo E18.CNhs11001.1288-20C724.63
kidney, neonate N00.CNhs11214.646-21G736.54
kidney, neonate N10.CNhs11206.758-6D543.76
kidney, neonate N20.CNhs11113.832-19I145.61
kidney, neonate N25.CNhs11122.1353-25F334.85
kidney, neonate N30.CNhs11203.1385-42H131.34
liver, adult pregnant day01.CNhs10466.508-5B219.57
liver, embryo E12.CNhs10601.355-15F820.52
liver, embryo E13.CNhs10524.378-3H622.80
liver, embryo E14.CNhs10594.409-16E120.24
liver, embryo E15.CNhs10520.433-16D722.52
liver, embryo E16.CNhs10523.462-17F522.19
liver, embryo E17.CNhs10510.481-18A318.59
liver, embryo E18.CNhs10579.499-43G423.30
liver, neonate N00.CNhs11117.641-24F426.10
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A850.32
liver, neonate N07.CNhs11103.716-20H223.07
liver, neonate N10.CNhs11115.751-24B921.22
liver, neonate N20.CNhs11220.823-25A334.60
liver, neonate N25.CNhs11198.1368-26H119.91
liver, neonate N30.CNhs11106.1382-42D127.98
lung, adult.CNhs10474.28-22B154.13
lung, embryo E12.CNhs10522.354-16G221.41
lung, embryo E14.CNhs10604.404-26F832.59
lung, embryo E15.CNhs11020.432-17C533.44
lung, embryo E16.CNhs10998.458-17B637.32
lung, embryo E17.CNhs10605.480-44A641.54
lung, embryo E18.CNhs10583.1287-20I630.71
lung, neonate N00.CNhs11224.640-42C645.86
lung, neonate N06.CNhs11212.683-20E546.19
lung, neonate N07.CNhs11111.715-19A351.38
lung, neonate N10.CNhs11219.750-23E659.95
lung, neonate N20.CNhs11109.822-18A451.78
lung, neonate N25.CNhs11119.1359-25C753.88
lung, neonate N30.CNhs11133.1394-42H253.95
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A149.76
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A139.71
mammary gland, adult lactating day02.CNhs10480.595-22B629.01
mammary gland, adult pregnant day19.CNhs10476.588-5H249.39
medulla oblongata, adult.CNhs10477.17-12C244.63
medulla oblongata, neonate N30.CNhs11200.1396-42A347.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C241.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.72
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E336.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D730.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D831.64
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D933.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D441.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.96
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D636.37
olfactory brain, adult.CNhs10489.18-22I959.12
ovary, adult.CNhs10507.91-2I744.85
ovary, embryo E18.CNhs11040.505-44H736.86
ovary, neonate N00.CNhs11217.1299-22I437.79
oviduct, adult pregnant day01.CNhs10500.988-6G651.14
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F429.38
pancreas, embryo E15.CNhs11042.1556-45F229.93
pancreas, embryo E16.CNhs11003.460-26E534.33
pancreas, embryo E17.CNhs10599.1558-45G342.52
pancreas, embryo E18.CNhs10580.1535-43I731.97
pancreas, neonate N00.CNhs11105.645-26G941.09
pancreas, neonate N01.CNhs11138.1531-43D748.35
pancreas, neonate N02.CNhs11139.1539-43D856.33
pancreas, neonate N16.CNhs11136.787-43B649.30
pancreas, neonate N25.CNhs11094.1555-45E242.17
pancreas, neonate N30.CNhs11182.1548-44H550.54
pituitary gland, adult.CNhs10493.21-1G836.09
pituitary gland, embryo E12.CNhs11018.346-16E634.03
pituitary gland, embryo E13.CNhs11009.370-44C738.68
pituitary gland, embryo E14.CNhs11037.398-44A541.37
pituitary gland, embryo E15.CNhs10592.427-16B939.01
pituitary gland, embryo E16.CNhs11036.449-43F637.99
pituitary gland, embryo E17.CNhs11039.1265-44F535.87
pituitary gland, neonate N00.CNhs11190.1308-22E928.92
placenta, adult pregnant day10.CNhs10472.539-13I725.11
placenta, adult pregnant day17.CNhs10464.577-18G327.75
prostate, adult.CNhs10470.859-1F849.40
skin, adult.CNhs10492.30-1C344.68
skin, neonate N00.CNhs11124.650-25G446.50
skin, neonate N03.CNhs11215.662-22H345.60
skin, neonate N06.CNhs11097.693-20I536.53
skin, neonate N10.CNhs11108.762-6C432.66
small intestine, neonate N16.CNhs11114.790-21I139.64
spinal cord, adult.CNhs10505.24-13C954.14
spleen, adult.CNhs10465.25-2G232.81
spleen, embryo E16.CNhs11035.461-43C137.36
spleen, embryo E18.CNhs11011.1271-21F225.37
spleen, neonate N10.CNhs11116.752-24D140.31
spleen, neonate N20.CNhs11112.824-19H148.80
spleen, neonate N25.CNhs11099.1354-25G331.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.32
stomach, adult.CNhs10503.33-1H631.50
stomach, embryo E12.CNhs10588.356-43E328.00
stomach, embryo E15.CNhs10603.1252-16G835.58
stomach, embryo E16.CNhs11022.459-17D431.00
stomach, embryo E17.CNhs11006.1035-18D530.95
stomach, embryo E18.CNhs10999.1286-20C632.32
stomach, neonate N03.CNhs11193.1340-24B840.73
stomach, neonate N07.CNhs11210.718-18A946.20
stomach, neonate N25.CNhs11104.1355-25E430.89
stomach, neonate N30.CNhs11134.1386-42I140.57
submandibular gland, adult.CNhs10469.59-29C147.22
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F530.65
testis, embryo E15.CNhs11034.443-27C521.34
testis, embryo E16.CNhs11033.470-26G538.89
testis, embryo E17.CNhs11029.486-18I525.70
testis, embryo E18.CNhs11027.503-18G531.76
testis, neonate N00.CNhs11189.1300-22B735.68
testis, neonate N07.CNhs11222.726-26I447.00
testis, neonate N10.CNhs11204.763-44D934.18
testis, neonate N20.CNhs11110.839-18H319.81
testis, neonate N30.CNhs11130.1391-42E221.03
thymus, adult.CNhs10471.38-12B529.07
thymus, embryo E14.CNhs11041.402-44I424.12
thymus, embryo E15.CNhs11005.430-45I226.40
thymus, embryo E16.CNhs11002.456-26C521.05
thymus, embryo E17.CNhs10581.478-18C127.93
thymus, embryo E18.CNhs10595.1273-19G427.02
thymus, neonate N02.CNhs11181.1541-43F833.17
thymus, neonate N03.CNhs11137.2104-43C737.81
thymus, neonate N06.CNhs11197.681-26C438.87
thymus, neonate N07.CNhs11211.713-19D331.32
thymus, neonate N10.CNhs11194.748-24E436.70
thymus, neonate N20.CNhs11186.820-7A241.42
thymus, neonate N25.CNhs11125.1362-25G734.83
thymus, neonate N30.CNhs11132.1393-42G242.19
tongue, adult.CNhs10499.32-1B430.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.74
urinary bladder, adult.CNhs10481.879-12E436.13
uterus, adult pregnant day19.CNhs10497.590-15F536.79
uterus, adult.CNhs10509.92-27E539.74
vagina, adult.CNhs10502.89-27D528.73
vesicular gland, adult.CNhs10491.51-27F850.16
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A151.96
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A243.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D742.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.31
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A534.75
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.87
whole body, embryo E11.CNhs11014.324-5I824.91
whole body, embryo E12.CNhs10587.857-27C953.47
whole body, embryo E13.CNhs10512.372-23H228.68
whole body, embryo E14.5.CNhs10578.420-27D236.22
whole body, embryo E14.CNhs10519.395-14B131.02
whole body, embryo E16.CNhs10514.453-14F231.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G529.67
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G531.77
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G537.65
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G530.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G534.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G537.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G544.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G548.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G541.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G546.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G546.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G543.27
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G529.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G536.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G538.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G536.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G539.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G538.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G536.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G543.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G538.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G540.45
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G540.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G545.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G541.52
whole body, embryo E17.5.CNhs10513.490-9F934.72
whole body, embryo E17.CNhs10517.475-3I544.72
whole body, embryo E18.CNhs10516.493-3B329.71
whole body, neonate N00.CNhs10525.657-19C240.61
whole body, neonate N01.CNhs10576.659-23C631.18
whole body, neonate N06.CNhs10515.692-21D131.54
whole body, neonate N10.CNhs10518.761-6B432.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.38e-1023
neuroblast (sensu Vertebrata)5.38e-1023

Uber anatomy
Ontology termp-valuen
neural tube1.06e-1052
neural rod1.06e-1052
future spinal cord1.06e-1052
neural keel1.06e-1052
regional part of nervous system1.39e-1054
ecto-epithelium9.43e-1073
brain1.74e-0947
future brain1.74e-0947
neurectoderm2.02e-0964
neural plate2.02e-0964
presumptive neural plate2.02e-0964
central nervous system5.30e-0973
regional part of brain5.31e-0946
ectoderm-derived structure6.86e-0995
ectoderm6.86e-0995
presumptive ectoderm6.86e-0995
gray matter9.94e-0934
nervous system2.24e-0875
anterior neural tube4.40e-0840
regional part of forebrain1.12e-0739
forebrain1.12e-0739
future forebrain1.12e-0739
pre-chordal neural plate1.16e-0749
brain grey matter1.47e-0729
regional part of telencephalon1.47e-0729
telencephalon1.47e-0729
structure with developmental contribution from neural crest5.54e-0792
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