FFCP PHASE1:Mm9::chr3:87650700..87650710,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27371 | |EntrezGene=27371 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt=Q9QXK9,Q5D0E4 | |UniProt=Q9QXK9,Q5D0E4 | ||
|association_with_transcript=23bp_to_ENSMUST00000029709,ENSMUST00000107581,NM_001025571,NM_021309,uc008psz.1,uc008pta.1_5end | |association_with_transcript=23bp_to_ENSMUST00000029709,ENSMUST00000107581,NM_001025571,NM_021309,uc008psz.1,uc008pta.1_5end | ||
|cluster_id=chr3:87650700..87650710,+ | |||
|description=CAGE_peak_4_at_Sh2d2a_5end | |description=CAGE_peak_4_at_Sh2d2a_5end | ||
|id=chr3:87650700..87650710,+ | |id=chr3:87650700..87650710,+ | ||
|ontology_enrichment_celltype=CL:0000838!5.80e-23!12;CL:0000084!1.62e-21!11;CL:0000827!1.62e-21!11;CL:0000542!5.90e-21!13;CL:0000051!5.90e-21!13;CL:0000791!2.81e-18!9;CL:0000789!2.81e-18!9;CL:0002420!2.81e-18!9;CL:0002419!2.81e-18!9;CL:0000790!2.81e-18!9;CL:0000624!2.89e-16!8;CL:0000738!2.69e-15!17;CL:0002087!2.69e-15!17;CL:0002031!6.80e-13!25;CL:0000893!2.32e-12!6;CL:0002489!2.32e-12!6;CL:0000898!2.32e-12!6;CL:0000809!2.32e-12!6;CL:0000810!2.32e-12!6;CL:0000895!2.32e-12!6;CL:0000808!2.32e-12!6;CL:0000894!2.32e-12!6;CL:0000806!2.32e-12!6;CL:0000807!2.32e-12!6;CL:0000805!2.32e-12!6;CL:0002425!2.32e-12!6;CL:0002436!2.32e-12!6;CL:0002427!2.32e-12!6;CL:0002428!2.32e-12!6;CL:0002429!2.32e-12!6;CL:0002433!2.32e-12!6;CL:0002431!2.32e-12!6;CL:0002432!2.32e-12!6;CL:0000988!2.64e-09!32;CL:0002032!2.64e-09!32;CL:0000037!2.64e-09!32;CL:0000566!2.64e-09!32;CL:0000837!2.64e-09!32 | |ontology_enrichment_celltype=CL:0000838!5.80e-23!12;CL:0000084!1.62e-21!11;CL:0000827!1.62e-21!11;CL:0000542!5.90e-21!13;CL:0000051!5.90e-21!13;CL:0000791!2.81e-18!9;CL:0000789!2.81e-18!9;CL:0002420!2.81e-18!9;CL:0002419!2.81e-18!9;CL:0000790!2.81e-18!9;CL:0000624!2.89e-16!8;CL:0000738!2.69e-15!17;CL:0002087!2.69e-15!17;CL:0002031!6.80e-13!25;CL:0000893!2.32e-12!6;CL:0002489!2.32e-12!6;CL:0000898!2.32e-12!6;CL:0000809!2.32e-12!6;CL:0000810!2.32e-12!6;CL:0000895!2.32e-12!6;CL:0000808!2.32e-12!6;CL:0000894!2.32e-12!6;CL:0000806!2.32e-12!6;CL:0000807!2.32e-12!6;CL:0000805!2.32e-12!6;CL:0002425!2.32e-12!6;CL:0002436!2.32e-12!6;CL:0002427!2.32e-12!6;CL:0002428!2.32e-12!6;CL:0002429!2.32e-12!6;CL:0002433!2.32e-12!6;CL:0002431!2.32e-12!6;CL:0002432!2.32e-12!6;CL:0000988!2.64e-09!32;CL:0002032!2.64e-09!32;CL:0000037!2.64e-09!32;CL:0000566!2.64e-09!32;CL:0000837!2.64e-09!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.59e-27,9;CL:0000789,1.59e-27,9;CL:0002420,1.59e-27,9;CL:0002419,1.59e-27,9;CL:0000790,1.59e-27,9;CL:0000624,7.43e-23,8;CL:0000084,2.09e-22,11;CL:0000827,2.09e-22,11;CL:0000838,1.74e-20,12;CL:0000542,7.36e-19,13;CL:0000051,7.36e-19,13;CL:0000738,2.93e-14,17;CL:0002087,2.93e-14,17;CL:0000893,4.88e-14,6;CL:0002489,4.88e-14,6;CL:0000898,4.88e-14,6;CL:0000809,4.88e-14,6;CL:0000810,4.88e-14,6;CL:0000895,4.88e-14,6;CL:0000808,4.88e-14,6;CL:0000894,4.88e-14,6;CL:0000806,4.88e-14,6;CL:0000807,4.88e-14,6;CL:0000805,4.88e-14,6;CL:0002425,4.88e-14,6;CL:0002436,4.88e-14,6;CL:0002427,4.88e-14,6;CL:0002428,4.88e-14,6;CL:0002429,4.88e-14,6;CL:0002433,4.88e-14,6;CL:0002431,4.88e-14,6;CL:0002432,4.88e-14,6;CL:0002031,1.84e-09,25;CL:0000988,3.18e-07,32;CL:0002032,3.18e-07,32;CL:0000037,3.18e-07,32;CL:0000837,3.18e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.74e-34!29;UBERON:0002370!1.13e-31!23;UBERON:0000974!1.13e-31!23;UBERON:0004807!1.13e-31!23;UBERON:0005058!1.13e-31!23;UBERON:0003351!1.13e-31!23;UBERON:0009113!1.13e-31!23;UBERON:0003295!1.13e-31!23;UBERON:0009722!1.13e-31!23;UBERON:0005562!1.13e-31!23;UBERON:0007690!1.13e-31!23;UBERON:0006562!4.07e-30!24;UBERON:0003408!4.07e-30!24;UBERON:0001557!4.07e-30!24;UBERON:0001042!4.07e-30!24;UBERON:0008814!4.07e-30!24;UBERON:0009145!4.07e-30!24;UBERON:0002193!4.77e-28!48;UBERON:0000072!3.83e-26!27;UBERON:0002390!1.40e-23!45;UBERON:0003061!1.40e-23!45;UBERON:0000065!3.07e-22!41;UBERON:0001004!1.49e-21!42;UBERON:0000063!6.84e-19!35;UBERON:0002405!7.97e-17!70;UBERON:0005057!1.11e-16!51;UBERON:0000064!1.32e-11!99;UBERON:0004119!1.79e-11!130;UBERON:0000925!1.79e-11!130;UBERON:0006595!1.79e-11!130;UBERON:0001007!6.65e-11!128;UBERON:0001555!6.65e-11!128;UBERON:0007026!6.65e-11!128;UBERON:0003081!9.39e-11!88;UBERON:0005911!1.19e-10!69;UBERON:0003929!4.48e-10!55;UBERON:0000077!1.15e-09!97;UBERON:0001041!1.17e-09!92;UBERON:0004921!1.95e-09!126;UBERON:0004185!1.95e-09!126;UBERON:0002368!8.25e-09!60;UBERON:0002530!9.51e-08!65;UBERON:0000490!1.48e-07!66 | |ontology_enrichment_uberon=UBERON:0004177!2.74e-34!29;UBERON:0002370!1.13e-31!23;UBERON:0000974!1.13e-31!23;UBERON:0004807!1.13e-31!23;UBERON:0005058!1.13e-31!23;UBERON:0003351!1.13e-31!23;UBERON:0009113!1.13e-31!23;UBERON:0003295!1.13e-31!23;UBERON:0009722!1.13e-31!23;UBERON:0005562!1.13e-31!23;UBERON:0007690!1.13e-31!23;UBERON:0006562!4.07e-30!24;UBERON:0003408!4.07e-30!24;UBERON:0001557!4.07e-30!24;UBERON:0001042!4.07e-30!24;UBERON:0008814!4.07e-30!24;UBERON:0009145!4.07e-30!24;UBERON:0002193!4.77e-28!48;UBERON:0000072!3.83e-26!27;UBERON:0002390!1.40e-23!45;UBERON:0003061!1.40e-23!45;UBERON:0000065!3.07e-22!41;UBERON:0001004!1.49e-21!42;UBERON:0000063!6.84e-19!35;UBERON:0002405!7.97e-17!70;UBERON:0005057!1.11e-16!51;UBERON:0000064!1.32e-11!99;UBERON:0004119!1.79e-11!130;UBERON:0000925!1.79e-11!130;UBERON:0006595!1.79e-11!130;UBERON:0001007!6.65e-11!128;UBERON:0001555!6.65e-11!128;UBERON:0007026!6.65e-11!128;UBERON:0003081!9.39e-11!88;UBERON:0005911!1.19e-10!69;UBERON:0003929!4.48e-10!55;UBERON:0000077!1.15e-09!97;UBERON:0001041!1.17e-09!92;UBERON:0004921!1.95e-09!126;UBERON:0004185!1.95e-09!126;UBERON:0002368!8.25e-09!60;UBERON:0002530!9.51e-08!65;UBERON:0000490!1.48e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.39e-39,23;UBERON:0000974,1.39e-39,23;UBERON:0004807,1.39e-39,23;UBERON:0005058,1.39e-39,23;UBERON:0003351,1.39e-39,23;UBERON:0009113,1.39e-39,23;UBERON:0003295,1.39e-39,23;UBERON:0009722,1.39e-39,23;UBERON:0005562,1.39e-39,23;UBERON:0007690,1.39e-39,23;UBERON:0006562,7.42e-38,24;UBERON:0003408,7.42e-38,24;UBERON:0001557,7.42e-38,24;UBERON:0001042,7.42e-38,24;UBERON:0008814,7.42e-38,24;UBERON:0009145,7.42e-38,24;UBERON:0000072,1.92e-33,27;UBERON:0004177,5.24e-31,29;UBERON:0005057,5.24e-31,29;UBERON:0000077,2.31e-25,35;UBERON:0007811,1.32e-24,36;UBERON:0000065,2.29e-21,41;UBERON:0002193,6.66e-21,48;UBERON:0002405,6.66e-21,48;UBERON:0001004,8.24e-21,42;UBERON:0000153,2.79e-20,43;UBERON:0002390,2.73e-19,45;UBERON:0003061,2.73e-19,45;UBERON:0003929,2.04e-15,55;UBERON:0002368,5.83e-14,60;UBERON:0002530,9.97e-13,65;UBERON:0000490,1.67e-12,66;UBERON:0005911,7.20e-12,69;UBERON:0000949,2.75e-11,72;UBERON:0001041,6.03e-10,80;UBERON:0003081,5.66e-09,87 | |||
|phase1_expression=0,0,0,0,0,0,0,5.03580961422147,1.68946466582,1.87251621057595,0.34243593645101,0.478632953972018,2.9104124088305,3.75907730401689,0,0,0,0.315462165358238,0.411343300817216,0,0.17008658030214,0.595745707205312,0.522399578277871,0.47997726838022,0.45881856213434,0,0,0,0.190023419456374,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,1.45072428402269,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0.202725215290164,0.718976700153791,1.29920822977795,1.07416017400489,1.39076948346885,1.56254084375959,1.32920574457119,0.605798699688886,0.685861259894999,1.20991422164209,1.07203668813728,1.05833025804362,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,5.03580961422147,1.68946466582,1.87251621057595,0.34243593645101,0.478632953972018,2.9104124088305,3.75907730401689,0,0,0,0.315462165358238,0.411343300817216,0,0.17008658030214,0.595745707205312,0.522399578277871,0.47997726838022,0.45881856213434,0,0,0,0.190023419456374,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,1.45072428402269,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0.202725215290164,0.718976700153791,1.29920822977795,1.07416017400489,1.39076948346885,1.56254084375959,1.32920574457119,0.605798699688886,0.685861259894999,1.20991422164209,1.07203668813728,1.05833025804362,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Sh2d2a | |short_description=p4@Sh2d2a | ||
}} | }} |
Latest revision as of 19:10, 25 September 2015
Short description: | p4@Sh2d2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sh2d2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 23bp_to_ENSMUST00000029709, ENSMUST00000107581, NM_001025571, NM_021309, uc008psz.1, uc008pta.1_5end |
EntrezGene: | Sh2d2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data