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FFCP PHASE1:Mm9::chr16:91011338..91011349,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104015
|EntrezGene=104015
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8CHC4,E9Q7S0,D3Z656
|UniProt=Q8CHC4,E9Q7S0,D3Z656
|association_with_transcript=0bp_to_ENSMUST00000023696,ENSMUST00000170853,NM_001045515,uc007zww.2,uc007zwx.2_5end
|association_with_transcript=0bp_to_ENSMUST00000023696,ENSMUST00000170853,NM_001045515,uc007zww.2,uc007zwx.2_5end
|cluster_id=chr16:91011338..91011349,-
|description=CAGE_peak_5_at_Synj1_5end
|description=CAGE_peak_5_at_Synj1_5end
|id=chr16:91011338..91011349,-
|id=chr16:91011338..91011349,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,3.29e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.59e-13!50;UBERON:0006238!1.59e-13!50;UBERON:0001049!2.29e-13!52;UBERON:0005068!2.29e-13!52;UBERON:0006241!2.29e-13!52;UBERON:0007135!2.29e-13!52;UBERON:0002616!5.58e-13!49;UBERON:0000033!4.30e-11!63;UBERON:0002020!8.38e-11!34;UBERON:0002346!5.06e-10!71;UBERON:0003075!5.06e-10!71;UBERON:0007284!5.06e-10!71;UBERON:0003080!1.17e-09!40;UBERON:0007811!1.24e-09!86;UBERON:0000153!2.31e-09!94;UBERON:0003056!2.99e-09!49;UBERON:0002791!3.35e-09!29;UBERON:0003528!3.35e-09!29;UBERON:0001893!3.35e-09!29;UBERON:0002780!4.35e-09!39;UBERON:0001890!4.35e-09!39;UBERON:0006240!4.35e-09!39;UBERON:0001017!2.00e-08!73;UBERON:0005743!2.00e-08!73;UBERON:0000073!3.99e-08!75;UBERON:0001016!3.99e-08!75;UBERON:0002021!7.93e-07!10;UBERON:0000411!7.93e-07!10;UBERON:0001950!7.93e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.01e-30,54;UBERON:0001049,1.79e-26,52;UBERON:0005068,1.79e-26,52;UBERON:0006241,1.79e-26,52;UBERON:0007135,1.79e-26,52;UBERON:0000955,1.99e-25,47;UBERON:0006238,1.99e-25,47;UBERON:0002616,6.20e-24,46;UBERON:0001017,6.46e-24,73;UBERON:0001016,4.48e-23,75;UBERON:0002346,8.08e-22,64;UBERON:0003075,8.08e-22,64;UBERON:0007284,8.08e-22,64;UBERON:0003080,7.83e-19,40;UBERON:0010371,2.90e-18,73;UBERON:0004121,7.49e-18,95;UBERON:0000924,7.49e-18,95;UBERON:0006601,7.49e-18,95;UBERON:0002020,8.13e-18,34;UBERON:0002780,2.79e-17,39;UBERON:0001890,2.79e-17,39;UBERON:0006240,2.79e-17,39;UBERON:0003528,3.52e-17,29;UBERON:0002791,3.52e-17,29;UBERON:0001893,3.52e-17,29;UBERON:0003056,6.53e-16,49;UBERON:0002021,4.16e-15,10;UBERON:0000411,4.16e-15,10;UBERON:0001950,4.16e-15,10;UBERON:0010314,4.71e-13,92;UBERON:0002619,2.09e-12,17;UBERON:0000956,9.38e-12,21;UBERON:0001869,9.38e-12,21;UBERON:0000203,9.38e-12,21;UBERON:0000025,2.05e-08,114;UBERON:0004684,3.29e-08,3;UBERON:0002275,3.29e-08,3;UBERON:0003076,3.43e-08,12;UBERON:0003057,3.43e-08,12;UBERON:0004111,1.94e-07,122
|phase1_expression=0,0,0,0,0.500895729946347,0.839396359559449,0,0.387369970324729,0,0,0,0,0.513602189793617,0.524522414513984,0.666219523631325,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,0.510259740906419,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,1.25559489221072,0,2.09409497589519,1.17646297606203,2.73218193983378,1.45653105909346,0,0,0,0,0.218025156380447,0,0,0,0,0.335565212115473,1.45072428402269,0.336093799142464,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,1.42825492201902,0.220868540951614,0.367472397644862,0.287536413054709,0.919218786610021,3.30347642998166,5.36286819957788,3.84016333140609,0.527545150920775,0.914876436024097,1.04182674111352,4.74611098302348,0.56276261003168,3.51435969886663,0.883885756421003,1.13897344639282,0.745597783301202,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,0.45673551887624,0.776813650941515,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0.494389935468748,0.144599356919912,0,0.485300549842228,0.441683036920787,0,1.86391761218122,2.92780797011547,2.51336048176146,0.255457055208591,0.359445373517761,0,0.381210681219194,3.2953940669061,1.83000241127451,1.88481528169297,3.30266208365325,2.81287003063364,2.90903262383384,3.56930778749067,0.101839363850316,0.373220911830279,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.749613796477831,1.03481348295606,0,0,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0,0.656669856316381,0.324275238183423,0.292399974850665,0,0.134206418760372,1.89260953707715,1.23485534855141,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0.898819408654221,0,0.398282546508734,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0.899448449539415,0.405720242777006,0.72353147925725,0,0.863088412352432,0.486405680325106,0,0,0,0.312037673114561,0.505157755894224,0.358794827043824,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0.327726629431476,0,0.578596234326046,0,0.54390568381871,0,0,2.72936002979246,4.33683240391152,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,1.60660658210904,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,1.45413491791002,0,0,1.05418608574999,0,1.70219802876894,0.18006109403131,0.258717367565509,0,0.177340233642274,0,0.658196082408484,0.304464949114599,0.469343416127421,0.42366414172764,0.220528398054962,0,0.322928853391811,0.241251699712623,0.358117032009409,0,0.874442509889552,2.96680483216816,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0.316335993581135,0,0.324016022465404,0.418176592028937,0,0,0.0826534557253359,0.26175594198403,0.518459893167171,0,0,0.448549638131936,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.734015410979976,0.483168241652012,0.576060012515731,0.316011120628178,0,0,0.129920822977795,0.358053391334963,0.596044064343795,0.841368146639782,0.590758108698309,0.706765149637033,0.381034033274999,0.201652370273681,0.877120926657772,0.769694733122636,0.935015217452552,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,1.12950368523413,2.76195141904306,1.14579102687879,1.03111909406213,4.7955776383945,0.755393897389701,2.70009000092722,1.35096360967266,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,0.341467211508268,0.729320151204882,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.34461281373368,0,0.463537303779422,0.578727661391115,0.412085900803307,0.588795680537589,0,0.532427418478012,0.238436189947321,0.436039249896986,0.564656282491984,0.676916863133412,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.830445126869219,0.492522411877817,0,0.309873682371932,0,0.249810577937946,0.701794825336225,0.859484216193193,0.191288332068843,0.220591419119515,0
|phase1_expression=0,0,0,0,0.500895729946347,0.839396359559449,0,0.387369970324729,0,0,0,0,0.513602189793617,0.524522414513984,0.666219523631325,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,0.510259740906419,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,1.25559489221072,0,2.09409497589519,1.17646297606203,2.73218193983378,1.45653105909346,0,0,0,0,0.218025156380447,0,0,0,0,0.335565212115473,1.45072428402269,0.336093799142464,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,1.42825492201902,0.220868540951614,0.367472397644862,0.287536413054709,0.919218786610021,3.30347642998166,5.36286819957788,3.84016333140609,0.527545150920775,0.914876436024097,1.04182674111352,4.74611098302348,0.56276261003168,3.51435969886663,0.883885756421003,1.13897344639282,0.745597783301202,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,0.45673551887624,0.776813650941515,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0.494389935468748,0.144599356919912,0,0.485300549842228,0.441683036920787,0,1.86391761218122,2.92780797011547,2.51336048176146,0.255457055208591,0.359445373517761,0,0.381210681219194,3.2953940669061,1.83000241127451,1.88481528169297,3.30266208365325,2.81287003063364,2.90903262383384,3.56930778749067,0.101839363850316,0.373220911830279,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.749613796477831,1.03481348295606,0,0,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0,0.656669856316381,0.324275238183423,0.292399974850665,0,0.134206418760372,1.89260953707715,1.23485534855141,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0.898819408654221,0,0.398282546508734,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0.899448449539415,0.405720242777006,0.72353147925725,0,0.863088412352432,0.486405680325106,0,0,0,0.312037673114561,0.505157755894224,0.358794827043824,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0.327726629431476,0,0.578596234326046,0,0.54390568381871,0,0,2.72936002979246,4.33683240391152,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,1.60660658210904,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,1.45413491791002,0,0,1.05418608574999,0,1.70219802876894,0.18006109403131,0.258717367565509,0,0.177340233642274,0,0.658196082408484,0.304464949114599,0.469343416127421,0.42366414172764,0.220528398054962,0,0.322928853391811,0.241251699712623,0.358117032009409,0,0.874442509889552,2.96680483216816,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0.316335993581135,0,0.324016022465404,0.418176592028937,0,0,0.0826534557253359,0.26175594198403,0.518459893167171,0,0,0.448549638131936,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.734015410979976,0.483168241652012,0.576060012515731,0.316011120628178,0,0,0.129920822977795,0.358053391334963,0.596044064343795,0.841368146639782,0.590758108698309,0.706765149637033,0.381034033274999,0.201652370273681,0.877120926657772,0.769694733122636,0.935015217452552,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,1.12950368523413,2.76195141904306,1.14579102687879,1.03111909406213,4.7955776383945,0.755393897389701,2.70009000092722,1.35096360967266,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,0.341467211508268,0.729320151204882,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.34461281373368,0,0.463537303779422,0.578727661391115,0.412085900803307,0.588795680537589,0,0.532427418478012,0.238436189947321,0.436039249896986,0.564656282491984,0.676916863133412,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.830445126869219,0.492522411877817,0,0.309873682371932,0,0.249810577937946,0.701794825336225,0.859484216193193,0.191288332068843,0.220591419119515,0
|short_description=p5@Synj1
|short_description=p5@Synj1
}}
}}

Latest revision as of 20:12, 25 September 2015

Short description:p5@Synj1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Synj1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000023696, ENSMUST00000170853, NM_001045515, uc007zww.2, uc007zwx.2_5end
EntrezGene:Synj1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Synj1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron3.29e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.01e-3054
neural tube1.79e-2652
neural rod1.79e-2652
future spinal cord1.79e-2652
neural keel1.79e-2652
brain1.99e-2547
future brain1.99e-2547
regional part of brain6.20e-2446
central nervous system6.46e-2473
nervous system4.48e-2375
neurectoderm8.08e-2264
neural plate8.08e-2264
presumptive neural plate8.08e-2264
anterior neural tube7.83e-1940
ecto-epithelium2.90e-1873
ectoderm-derived structure7.49e-1895
ectoderm7.49e-1895
presumptive ectoderm7.49e-1895
gray matter8.13e-1834
regional part of forebrain2.79e-1739
forebrain2.79e-1739
future forebrain2.79e-1739
brain grey matter3.52e-1729
regional part of telencephalon3.52e-1729
telencephalon3.52e-1729
pre-chordal neural plate6.53e-1649
occipital lobe4.16e-1510
visual cortex4.16e-1510
neocortex4.16e-1510
structure with developmental contribution from neural crest4.71e-1392
regional part of cerebral cortex2.09e-1217
cerebral cortex9.38e-1221
cerebral hemisphere9.38e-1221
pallium9.38e-1221
tube2.05e-08114
raphe nuclei3.29e-083
reticular formation3.29e-083
posterior neural tube3.43e-0812
chordal neural plate3.43e-0812
anatomical conduit1.94e-07122
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