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FFCP PHASE1:Mm9::chr3:89083555..89083569,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:89083555..89083569,-
|DHSsupport=NA
|short_description=p2@Efna1
|DPIdataset=NA
|description=CAGE_peak_2_at_Efna1_5end
|association_with_transcript=0bp_to_ENSMUST00000029566,ENSMUST00000118860,NM_010107,uc008pyo.2_5end
|EntrezGene=13636
|EntrezGene=13636
|HGNC=
|HGNC=
|MCL_coexpression_id=1642
|TSSclassifier=NA
|UniProt=P52793,D3Z7A6,Q9D7K8
|UniProt=P52793,D3Z7A6,Q9D7K8
|association_with_transcript=0bp_to_ENSMUST00000029566,ENSMUST00000118860,NM_010107,uc008pyo.2_5end
|cluster_id=chr3:89083555..89083569,-
|description=CAGE_peak_2_at_Efna1_5end
|id=chr3:89083555..89083569,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.24e-14!130;UBERON:0000925!1.24e-14!130;UBERON:0006595!1.24e-14!130;UBERON:0001007!4.29e-14!128;UBERON:0001555!4.29e-14!128;UBERON:0007026!4.29e-14!128;UBERON:0000160!1.81e-13!43;UBERON:0004921!2.21e-13!126;UBERON:0004185!2.21e-13!126;UBERON:0005409!1.46e-12!59;UBERON:0009569!3.81e-09!66;UBERON:0000344!7.41e-09!15;UBERON:0000481!1.18e-08!230;UBERON:0001242!3.03e-08!13;UBERON:0000060!3.03e-08!13;UBERON:0001262!3.03e-08!13;UBERON:0004786!3.03e-08!13;UBERON:0005177!3.03e-07!85;UBERON:0002048!5.83e-07!14;UBERON:0000117!5.83e-07!14;UBERON:0000171!5.83e-07!14;UBERON:0000170!5.83e-07!14;UBERON:0005597!5.83e-07!14;UBERON:0000118!5.83e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.78e-16,31;UBERON:0004119,1.39e-14,118;UBERON:0000925,1.39e-14,118;UBERON:0006595,1.39e-14,118;UBERON:0001007,4.72e-14,116;UBERON:0001555,4.72e-14,116;UBERON:0007026,4.72e-14,116;UBERON:0005409,1.40e-13,47;UBERON:0004921,2.43e-13,114;UBERON:0009569,4.44e-09,66;UBERON:0005177,4.77e-09,79;UBERON:0000344,6.93e-09,15;UBERON:0001242,2.85e-08,13;UBERON:0001262,2.85e-08,13;UBERON:0004786,2.85e-08,13;UBERON:0002048,5.55e-07,14;UBERON:0000117,5.55e-07,14;UBERON:0000171,5.55e-07,14;UBERON:0000170,5.55e-07,14;UBERON:0005597,5.55e-07,14;UBERON:0000118,5.55e-07,14
|phase1_expression=8.80818659076367,154.247130176598,146.96475432282,128.84975401671,164.293799422402,24.0067358834002,16.5864974822823,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,12.4163203620562,0,0,18.5591210440352,26.3820673227246,107.955609253624,54.2760115160434,49.7738547504404,77.1495082992878,43.601212448468,18.6253628950456,0,0,0,49.1047753577167,29.2572975830947,56.5549116846762,0,0,0,0,0,0,0.251793635951155,1.01376931219515,0.183546752161682,1.56478268869608,0.65407546914134,3.95435128922049,1.74986909166855,3.21968769738334,0,0,0,0,0.257259436035947,2.57880095944881,1.54701627683233,1.41621522601718,3.70293685490423,1.90149421051854,0.338844532069132,0,0,1.97773272513395,0,2.39680088414724,3.84218305321555,2.07379224616955,3.10513658162888,2.73422449756797,2.57085885963423,1.98781686856452,1.83736198822431,2.30029130443767,1.83843757322004,2.20231761998777,2.80912143787413,2.30409799884365,1.18697658957174,2.56165402086747,3.12548022334056,3.62937898701795,3.93933827022176,3.20876320331301,1.17851434189467,0.854230084794618,2.23679334990361,1.21161909333094,2.26714680320357,37.9722480199198,91.204930960027,412.062628226897,61.5261638467112,34.4381501247265,12.5447528387254,13.6231087527799,2.21559419351475,2.85764605063156,1.06001872353102,14.6477156567748,0,0,0,9.95858788651585,9.88103475352884,9.60496445528088,19.068707913083,4.40194402200192,8.01587550950054,8.84775166507293,8.52503339273995,7.61031140944993,8.89263579260473,9.52468527799209,6.40899615781345,21.5059621928905,5.78397427679647,5.30766331169925,6.79420769779119,8.39197770149496,5.33362778448744,87.6041277725174,2.92780797011547,6.0739544975902,46.237726992755,0,0,0,1.04853447583376,3.66000482254901,0.628271760564322,3.12883776346098,2.55715457330331,3.32460871295296,3.0825839982874,8.35082783572594,6.46916247172484,4.54900965180614,7.36546495602659,9.10843100738926,5.28774840196988,5.76198815377118,5.72678307775717,3.33378845841506,3.71529788826064,4.2165776051878,4.65666067330228,21.3412313003514,9.26619792822314,11.7887253189846,12.9325482132269,15.5706459566335,21.2433821578522,18.314610140307,12.9372273432021,0,0,0,12.8417978972011,12.195355119017,12.244220179349,15.1516630774535,13.3799677588235,12.8041703696524,12.3242990717716,11.267482858784,14.2453717687947,13.000228143165,23.4759473633106,17.5108628619048,20.4679982395465,22.8332119902693,25.0966003081895,3.99550902271842,1.74937841044784,82.6046957459495,93.0865994655676,16.6364835417482,11.8440702648824,11.3403365963442,18.9582513145942,28.0196335244537,31.3872283085723,39.3859121081945,28.8223170767019,32.4222419352348,45.1631191533412,35.2884997685607,41.3456927980942,49.9278895210544,58.547534336784,15.9321036800589,10.6251116727048,18.0332377076929,17.3103628668517,16.2920089220806,14.1674356178443,16.0620804295614,18.3036583494707,13.9728867778824,16.1650284737559,36.7601257588065,2.66952169145751,3.34150291692445,2.02375901146368,3.04290182082754,2.894125917029,10.1850340712568,12.083237772934,32.9134510353322,27.4561413188081,28.7536413054709,60.6589744699661,26.5232022147376,58.850878561677,44.4905585534342,88.2871644094962,45.4492847809847,8.52711352967181,19.5557971730431,19.6904299499218,23.2343345805617,40.7040205583612,48.7989463816328,37.0753930929818,35.6255425679992,42.7426851022136,33.4855014180723,46.7010446939853,36.0911612099722,43.6840156916165,0,0,10.8188140064188,7.45029215022778,3.05046120976805,3.39913891117389,15.2459499200308,14.1383719234449,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0.404810701674894,0.292255857911312,0,2.89189184779626,8.80028528291265,14.2452482933804,11.0763132360432,7.9185659026817,10.619611067197,8.01176099311439,7.55808892411878,7.54420319023592,10.6308681437078,10.4527950300935,13.4382712447475,12.7236805317127,8.91243445961803,7.58488219045958,5.27093042874994,9.28219889233682,9.53230896110606,7.20244376125241,10.8661294377514,8.3591443662321,11.5271151867478,11.9507107793387,9.54384319492302,12.7875278628132,8.91752490642099,80.072522786524,11.688005096913,26.0520279647538,18.729873496725,15.7416734062487,28.888107248759,30.6943482523265,40.8073171281791,4.45020724825223,1.19609616558497,10.9385040020508,6.11141940320049,2.82552685507037,1.0935538217682,0.915112692826091,0.849892149969277,0.839708713941948,0.690999869022119,21.9574242143476,13.7606157207794,8.94605655358134,11.3405607862891,10.6635030967379,13.538478952263,14.1607563704062,19.5888690069046,14.6583327511057,44.5875508123767,16.776161453347,0,8.97099276263873,11.5820943319968,5.63908446197738,6.58715099736429,7.26511339610346,5.75050469364194,3.6457227756306,3.46035836604846,0.966336483304024,2.59227005632079,1.26404448251271,8.10900861160657,9.0385642305048,4.28738715826724,4.11761400035207,2.78153896693771,1.32214994471966,2.36303243479324,1.51449674922221,1.37172251979,1.81487133246313,0.974578807397524,0.577271049841977,1.05189211963412,17.0047787711409,4.21773311410723,2.42227412845584,2.01461539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|phase1_expression=8.80818659076367,154.247130176598,146.96475432282,128.84975401671,164.293799422402,24.0067358834002,16.5864974822823,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,12.4163203620562,0,0,18.5591210440352,26.3820673227246,107.955609253624,54.2760115160434,49.7738547504404,77.1495082992878,43.601212448468,18.6253628950456,0,0,0,49.1047753577167,29.2572975830947,56.5549116846762,0,0,0,0,0,0,0.251793635951155,1.01376931219515,0.183546752161682,1.56478268869608,0.65407546914134,3.95435128922049,1.74986909166855,3.21968769738334,0,0,0,0,0.257259436035947,2.57880095944881,1.54701627683233,1.41621522601718,3.70293685490423,1.90149421051854,0.338844532069132,0,0,1.97773272513395,0,2.39680088414724,3.84218305321555,2.07379224616955,3.10513658162888,2.73422449756797,2.57085885963423,1.98781686856452,1.83736198822431,2.30029130443767,1.83843757322004,2.20231761998777,2.80912143787413,2.30409799884365,1.18697658957174,2.56165402086747,3.12548022334056,3.62937898701795,3.93933827022176,3.20876320331301,1.17851434189467,0.854230084794618,2.23679334990361,1.21161909333094,2.26714680320357,37.9722480199198,91.204930960027,412.062628226897,61.5261638467112,34.4381501247265,12.5447528387254,13.6231087527799,2.21559419351475,2.85764605063156,1.06001872353102,14.6477156567748,0,0,0,9.95858788651585,9.88103475352884,9.60496445528088,19.068707913083,4.40194402200192,8.01587550950054,8.84775166507293,8.52503339273995,7.61031140944993,8.89263579260473,9.52468527799209,6.40899615781345,21.5059621928905,5.78397427679647,5.30766331169925,6.79420769779119,8.39197770149496,5.33362778448744,87.6041277725174,2.92780797011547,6.0739544975902,46.237726992755,0,0,0,1.04853447583376,3.66000482254901,0.628271760564322,3.12883776346098,2.55715457330331,3.32460871295296,3.0825839982874,8.35082783572594,6.46916247172484,4.54900965180614,7.36546495602659,9.10843100738926,5.28774840196988,5.76198815377118,5.72678307775717,3.33378845841506,3.71529788826064,4.2165776051878,4.65666067330228,21.3412313003514,9.26619792822314,11.7887253189846,12.9325482132269,15.5706459566335,21.2433821578522,18.314610140307,12.9372273432021,0,0,0,12.8417978972011,12.195355119017,12.244220179349,15.1516630774535,13.3799677588235,12.8041703696524,12.3242990717716,11.267482858784,14.2453717687947,13.000228143165,23.4759473633106,17.5108628619048,20.4679982395465,22.8332119902693,25.0966003081895,3.99550902271842,1.74937841044784,82.6046957459495,93.0865994655676,16.6364835417482,11.8440702648824,11.3403365963442,18.9582513145942,28.0196335244537,31.3872283085723,39.3859121081945,28.8223170767019,32.4222419352348,45.1631191533412,35.2884997685607,41.3456927980942,49.9278895210544,58.547534336784,15.9321036800589,10.6251116727048,18.0332377076929,17.3103628668517,16.2920089220806,14.1674356178443,16.0620804295614,18.3036583494707,13.9728867778824,16.1650284737559,36.7601257588065,2.66952169145751,3.34150291692445,2.02375901146368,3.04290182082754,2.894125917029,10.1850340712568,12.083237772934,32.9134510353322,27.4561413188081,28.7536413054709,60.6589744699661,26.5232022147376,58.850878561677,44.4905585534342,88.2871644094962,45.4492847809847,8.52711352967181,19.5557971730431,19.6904299499218,23.2343345805617,40.7040205583612,48.7989463816328,37.0753930929818,35.6255425679992,42.7426851022136,33.4855014180723,46.7010446939853,36.0911612099722,43.6840156916165,0,0,10.8188140064188,7.45029215022778,3.05046120976805,3.39913891117389,15.2459499200308,14.1383719234449,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0.404810701674894,0.292255857911312,0,2.89189184779626,8.80028528291265,14.2452482933804,11.0763132360432,7.9185659026817,10.619611067197,8.01176099311439,7.55808892411878,7.54420319023592,10.6308681437078,10.4527950300935,13.4382712447475,12.7236805317127,8.91243445961803,7.58488219045958,5.27093042874994,9.28219889233682,9.53230896110606,7.20244376125241,10.8661294377514,8.3591443662321,11.5271151867478,11.9507107793387,9.54384319492302,12.7875278628132,8.91752490642099,80.072522786524,11.688005096913,26.0520279647538,18.729873496725,15.7416734062487,28.888107248759,30.6943482523265,40.8073171281791,4.45020724825223,1.19609616558497,10.9385040020508,6.11141940320049,2.82552685507037,1.0935538217682,0.915112692826091,0.849892149969277,0.839708713941948,0.690999869022119,21.9574242143476,13.7606157207794,8.94605655358134,11.3405607862891,10.6635030967379,13.538478952263,14.1607563704062,19.5888690069046,14.6583327511057,44.5875508123767,16.776161453347,0,8.97099276263873,11.5820943319968,5.63908446197738,6.58715099736429,7.26511339610346,5.75050469364194,3.6457227756306,3.46035836604846,0.966336483304024,2.59227005632079,1.26404448251271,8.10900861160657,9.0385642305048,4.28738715826724,4.11761400035207,2.78153896693771,1.32214994471966,2.36303243479324,1.51449674922221,1.37172251979,1.81487133246313,0.974578807397524,0.577271049841977,1.05189211963412,17.0047787711409,4.21773311410723,2.42227412845584,2.01461539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|short_description=p2@Efna1
}}
}}

Latest revision as of 20:29, 25 September 2015

Short description:p2@Efna1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Efna1_5end
Coexpression cluster:MCL_coexpression_mm9:1642
Association with transcript: 0bp_to_ENSMUST00000029566, ENSMUST00000118860, NM_010107, uc008pyo.2_5end
EntrezGene:Efna1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Efna1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5154.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6146.96
CD326+ enterocyte, pool1.CNhs13542.11848-124I3128.85
CD326+ enterocyte, pool2.CNhs13197.11849-124I4164.29
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.59
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D226.38
GP2+ M cell, pool1.CNhs13228.11845-124H9107.96
GP2+ M cell, pool2.CNhs13231.11846-124I154.28
GP2+ M cell, pool3.CNhs13240.11847-124I249.77
Ileum epithelium, pool1.CNhs13199.10252-104B977.15
Ileum epithelium, pool2.CNhs13232.10253-104C143.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F549.10
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F629.26
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F756.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F791.20
Mouse hepatocyte, donor1.CNhs13078.11714-123C4412.06
Mouse hepatocyte, donor3.CNhs12615.11637-122C861.53
Mouse hepatocyte, donor6.CNhs13090.11822-124F434.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.07
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C19.52
adrenal gland, neonate N25.CNhs11223.1377-27I36.41
amnion, adult pregnant day17.5.CNhs10488.583-22A821.51
aorta, adult.CNhs10498.46-23H15.78
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F56.79
bone (os femoris), neonate N16.CNhs11225.1525-43A68.39
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H487.60
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H746.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.47
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C69.11
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D45.73
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E221.34
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E211.79
forelimb, embryo E14.CNhs10577.413-26A812.93
forelimb, embryo E15.CNhs11007.437-20E715.57
forelimb, embryo E17.CNhs10598.1517-43C421.24
forelimb, embryo E18.CNhs11008.1520-43B518.31
gonad, embryo E13.CNhs11044.1564-45I612.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E912.84
heart, embryo E12.CNhs11015.353-12F512.20
heart, embryo E13.CNhs11013.376-3I912.24
heart, embryo E14.CNhs10597.403-26D415.15
heart, embryo E15.CNhs11017.431-16C813.38
heart, embryo E16.CNhs11021.457-17C612.80
heart, embryo E17.CNhs11025.479-18E512.32
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E314.25
heart, neonate N03.CNhs11221.1349-25I213.00
heart, neonate N10.CNhs11118.749-24G123.48
heart, neonate N16.CNhs11209.782-15G117.51
heart, neonate N20.CNhs11127.821-26I620.47
heart, neonate N25.CNhs11196.1351-25D322.83
heart, neonate N30.CNhs11202.1390-42D225.10
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I382.60
intestine, adult.CNhs10496.178-9A393.09
intestine, embryo E12.CNhs11019.1251-16I516.64
intestine, embryo E13.CNhs11010.381-16D511.84
intestine, embryo E15.CNhs10602.976-16D811.34
intestine, embryo E16.CNhs10585.463-22H418.96
intestine, embryo E17.CNhs10582.482-18D328.02
intestine, embryo E18.CNhs10526.1289-20F731.39
intestine, neonate N00.CNhs11126.644-26D139.39
intestine, neonate N01.CNhs11192.1322-23E928.82
intestine, neonate N06.CNhs11102.688-20B832.42
intestine, neonate N07.CNhs11095.720-20F245.16
intestine, neonate N10.CNhs11098.755-23A535.29
intestine, neonate N20.CNhs11187.827-18D141.35
intestine, neonate N25.CNhs11121.1352-25E349.93
intestine, neonate N30.CNhs11131.1384-42G158.55
kidney, embryo E14.CNhs10606.411-4I915.93
kidney, embryo E15.CNhs10997.434-16F810.63
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I217.31
kidney, embryo E18.CNhs11001.1288-20C716.29
kidney, neonate N00.CNhs11214.646-21G714.17
kidney, neonate N10.CNhs11206.758-6D516.06
kidney, neonate N20.CNhs11113.832-19I118.30
kidney, neonate N25.CNhs11122.1353-25F313.97
kidney, neonate N30.CNhs11203.1385-42H116.17
liver, adult pregnant day01.CNhs10466.508-5B236.76
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A310.19
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F432.91
liver, neonate N03.CNhs11123.1345-25G227.46
liver, neonate N06.CNhs11101.684-20A828.75
liver, neonate N07.CNhs11103.716-20H260.66
liver, neonate N10.CNhs11115.751-24B926.52
liver, neonate N20.CNhs11220.823-25A358.85
liver, neonate N25.CNhs11198.1368-26H144.49
liver, neonate N30.CNhs11106.1382-42D188.29
lung, adult.CNhs10474.28-22B145.45
lung, embryo E12.CNhs10522.354-16G28.53
lung, embryo E14.CNhs10604.404-26F819.56
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B623.23
lung, embryo E17.CNhs10605.480-44A640.70
lung, embryo E18.CNhs10583.1287-20I648.80
lung, neonate N00.CNhs11224.640-42C637.08
lung, neonate N06.CNhs11212.683-20E535.63
lung, neonate N07.CNhs11111.715-19A342.74
lung, neonate N10.CNhs11219.750-23E633.49
lung, neonate N20.CNhs11109.822-18A446.70
lung, neonate N25.CNhs11119.1359-25C736.09
lung, neonate N30.CNhs11133.1394-42H243.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.14
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I78.80
ovary, embryo E18.CNhs11040.505-44H714.25
ovary, neonate N00.CNhs11217.1299-22I411.08
oviduct, adult pregnant day01.CNhs10500.988-6G67.92
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G913.44
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C710.87
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I78.92
placenta, adult pregnant day17.CNhs10464.577-18G380.07
prostate, adult.CNhs10470.859-1F811.69
skin, adult.CNhs10492.30-1C326.05
skin, neonate N00.CNhs11124.650-25G418.73
skin, neonate N03.CNhs11215.662-22H315.74
skin, neonate N06.CNhs11097.693-20I528.89
skin, neonate N10.CNhs11108.762-6C430.69
small intestine, neonate N16.CNhs11114.790-21I140.81
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C110.94
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E313.76
stomach, embryo E15.CNhs10603.1252-16G88.95
stomach, embryo E16.CNhs11022.459-17D411.34
stomach, embryo E17.CNhs11006.1035-18D510.66
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B814.16
stomach, neonate N07.CNhs11210.718-18A919.59
stomach, neonate N25.CNhs11104.1355-25E414.66
stomach, neonate N30.CNhs11134.1386-42I144.59
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.97
testis, embryo E15.CNhs11034.443-27C511.58
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B75.75
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I48.11
thymus, embryo E15.CNhs11005.430-45I29.04
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B417.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E412.56
uterus, adult pregnant day19.CNhs10497.590-15F58.45
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D517.36
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.92
whole body, embryo E17.5.CNhs10513.490-9F910.80
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B312.16
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D113.90
whole body, neonate N10.CNhs10518.761-6B411.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine5.78e-1631
endoderm-derived structure1.39e-14118
endoderm1.39e-14118
presumptive endoderm1.39e-14118
digestive system4.72e-14116
digestive tract4.72e-14116
primitive gut4.72e-14116
gastrointestinal system1.40e-1347
subdivision of digestive tract2.43e-13114
subdivision of trunk4.44e-0966
trunk region element4.77e-0979
mucosa6.93e-0915
intestinal mucosa2.85e-0813
wall of intestine2.85e-0813
gastrointestinal system mucosa2.85e-0813
lung5.55e-0714
respiratory tube5.55e-0714
respiration organ5.55e-0714
pair of lungs5.55e-0714
lung primordium5.55e-0714
lung bud5.55e-0714
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