FFCP PHASE1:Mm9::chr11:8368574..8368583,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319939 | |EntrezGene=319939 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2000 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SSZ5 | |UniProt=Q5SSZ5 | ||
|association_with_transcript=-68bp_to_uc007hzj.1_5end | |association_with_transcript=-68bp_to_uc007hzj.1_5end | ||
|cluster_id=chr11:8368574..8368583,- | |||
|description=CAGE_peak_8_at_Tns3_5end | |description=CAGE_peak_8_at_Tns3_5end | ||
|id=chr11:8368574..8368583,- | |id=chr11:8368574..8368583,- | ||
|ontology_enrichment_celltype=CL:0000055!4.16e-13!50;CL:0000221!7.83e-11!44;CL:0000133!7.83e-11!44;CL:0002319!1.51e-10!43;CL:0000393!1.52e-09!39;CL:0000211!1.52e-09!39;CL:0002321!7.44e-09!70;CL:0000220!7.44e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.37e-11,7;CL:0000680,1.34e-09,6;CL:0000187,1.34e-09,6;CL:0000056,1.34e-09,6;CL:0002321,1.60e-09,70;CL:0000333,1.78e-08,10;CL:0000095,1.78e-08,10;CL:0000243,1.78e-08,10;CL:0000123,1.78e-08,10;CL:0000125,1.78e-08,10;CL:0000030,1.78e-08,10;CL:0000339,1.78e-08,10;CL:0000128,5.25e-08,6;CL:0000126,5.25e-08,6;CL:0000127,5.25e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.13e-12!114;UBERON:0004111!2.16e-11!122;UBERON:0000073!4.24e-11!75;UBERON:0001016!4.24e-11!75;UBERON:0001017!4.35e-10!73;UBERON:0005743!4.35e-10!73;UBERON:0005178!9.70e-09!17;UBERON:0005181!9.70e-09!17;UBERON:0002224!9.70e-09!17;UBERON:0000915!9.70e-09!17;UBERON:0008947!9.70e-09!17;UBERON:0003258!9.70e-09!17;UBERON:0004121!1.77e-08!102;UBERON:0000924!1.77e-08!102;UBERON:0006601!1.77e-08!102;UBERON:0002048!4.68e-08!14;UBERON:0000117!4.68e-08!14;UBERON:0000171!4.68e-08!14;UBERON:0000170!4.68e-08!14;UBERON:0005597!4.68e-08!14;UBERON:0000118!4.68e-08!14;UBERON:0004535!1.00e-07!23;UBERON:0001009!1.00e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.70e-12,14;UBERON:0000117,1.70e-12,14;UBERON:0000171,1.70e-12,14;UBERON:0000170,1.70e-12,14;UBERON:0005597,1.70e-12,14;UBERON:0000118,1.70e-12,14;UBERON:0005178,1.67e-11,17;UBERON:0005181,1.67e-11,17;UBERON:0002224,1.67e-11,17;UBERON:0000915,1.67e-11,17;UBERON:0008947,1.67e-11,17;UBERON:0003258,1.67e-11,17;UBERON:0005157,4.88e-11,20;UBERON:0005153,8.08e-10,17;UBERON:0000025,1.27e-09,114;UBERON:0004535,4.23e-09,23;UBERON:0001009,4.23e-09,23;UBERON:0004111,2.11e-08,122;UBERON:0000483,4.87e-07,174;UBERON:0000119,7.67e-07,176 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.72340783073175,1.10128051297009,0.782391344348039,5.66865406589161,3.29529274101708,2.72201858703997,1.95980990275508,2.87505128729943,0,0,0,3.08711323243136,2.29226751951005,2.57836046138721,0.404632921719196,0.528990979272033,0,0.677689064138264,0,0.449949858640699,0,0,0,0.768436610643109,0.414758449233911,0.945041568321835,0.420649922702764,0,1.10434270475807,1.10241719293459,0.766763768145891,0.919218786610021,1.10115880999389,0.383062014255563,0.768032666281217,0.131886287730194,0.274462930807229,0.52091337055676,0.837548997004143,1.12552522006336,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,3.40767869999328,1.51143120213571,1.44932244350839,0,0,0,0,0,0,0.170430322578058,1.81850203222008,1.06001872353102,0.704217098883403,3.84979432242953,0,7.11066703153331,0.649473123033642,1.01343946190039,0.505524445014783,0,0,0,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0,1.23597483867187,0,0,0.161766849947409,0.220841518460394,0,0,1.75668478206928,1.04723353406728,0,0,0,0,0.599162557619291,0,0.753926112677186,0.521472960576829,0.255715457330331,0.41557608911912,0.486723789203273,0.305518091550949,0.124406970610093,0.505445516867349,0.420883711772948,0.130120442962704,0,0.180062129805349,0.150704817835715,1.2246569847239,1.2811372028485,1.21812241927647,0.258703370739016,0.646703978798527,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.621377317606506,0.703578179943289,1.08037236876609,1.42046841351126,1.57411385397923,1.54267112887378,0.697601834251224,1.87791380979733,1.63471479314037,0.822799249567402,0,0.405344047729279,0.730999937126662,0.219550115291051,0.402619256281115,1.47202963994889,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.350679099451593,0.379419222745544,0.738050739898011,0.627994911365499,0.493588655687202,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,1.10851914099963,0.37898282354097,0.488894929326078,1.69745085775188,1.64283173801951,0.837531287209079,1.42826184531608,1.17080188714679,2.52216230569906,3.76489972402917,3.18909537314974,2.62181303545181,2.07221978239075,1.01254341007058,0,0,0,0,0.642202359951168,1.17211686592203,1.47541450839008,0.252470927204373,0.315508219416257,1.17131623288992,1.07711698866399,0.716906393857656,2.00518806674155,2.26461224631066,1.61924280669958,0.876767573733936,0.790575555893047,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0.532020700926821,0.713475270408282,0.987294123612726,0,0.469343416127421,0.42366414172764,0,0,0.322928853391811,0.241251699712623,0.119372344003136,0,0,1.11255181206306,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,1.04661582230785,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0.58678619322877,0.2604087696879,1.04859344425711,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.666740183404846,0.618105171716683,0,0.758091635291392,0.25347929989024,0.754505365544305,0.468207537349412,0.448176066834085,0.516919220600519,0.952587382566147,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0.532427418478012,0.476872379894642,0.145346416632329,0.564656282491984,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.29551344712669,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.429742108096597,0.57386499620653,0.441182838239031,0.927471342481686 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.72340783073175,1.10128051297009,0.782391344348039,5.66865406589161,3.29529274101708,2.72201858703997,1.95980990275508,2.87505128729943,0,0,0,3.08711323243136,2.29226751951005,2.57836046138721,0.404632921719196,0.528990979272033,0,0.677689064138264,0,0.449949858640699,0,0,0,0.768436610643109,0.414758449233911,0.945041568321835,0.420649922702764,0,1.10434270475807,1.10241719293459,0.766763768145891,0.919218786610021,1.10115880999389,0.383062014255563,0.768032666281217,0.131886287730194,0.274462930807229,0.52091337055676,0.837548997004143,1.12552522006336,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,3.40767869999328,1.51143120213571,1.44932244350839,0,0,0,0,0,0,0.170430322578058,1.81850203222008,1.06001872353102,0.704217098883403,3.84979432242953,0,7.11066703153331,0.649473123033642,1.01343946190039,0.505524445014783,0,0,0,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0,1.23597483867187,0,0,0.161766849947409,0.220841518460394,0,0,1.75668478206928,1.04723353406728,0,0,0,0,0.599162557619291,0,0.753926112677186,0.521472960576829,0.255715457330331,0.41557608911912,0.486723789203273,0.305518091550949,0.124406970610093,0.505445516867349,0.420883711772948,0.130120442962704,0,0.180062129805349,0.150704817835715,1.2246569847239,1.2811372028485,1.21812241927647,0.258703370739016,0.646703978798527,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.621377317606506,0.703578179943289,1.08037236876609,1.42046841351126,1.57411385397923,1.54267112887378,0.697601834251224,1.87791380979733,1.63471479314037,0.822799249567402,0,0.405344047729279,0.730999937126662,0.219550115291051,0.402619256281115,1.47202963994889,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.350679099451593,0.379419222745544,0.738050739898011,0.627994911365499,0.493588655687202,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,1.10851914099963,0.37898282354097,0.488894929326078,1.69745085775188,1.64283173801951,0.837531287209079,1.42826184531608,1.17080188714679,2.52216230569906,3.76489972402917,3.18909537314974,2.62181303545181,2.07221978239075,1.01254341007058,0,0,0,0,0.642202359951168,1.17211686592203,1.47541450839008,0.252470927204373,0.315508219416257,1.17131623288992,1.07711698866399,0.716906393857656,2.00518806674155,2.26461224631066,1.61924280669958,0.876767573733936,0.790575555893047,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0.532020700926821,0.713475270408282,0.987294123612726,0,0.469343416127421,0.42366414172764,0,0,0.322928853391811,0.241251699712623,0.119372344003136,0,0,1.11255181206306,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,1.04661582230785,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0.58678619322877,0.2604087696879,1.04859344425711,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.666740183404846,0.618105171716683,0,0.758091635291392,0.25347929989024,0.754505365544305,0.468207537349412,0.448176066834085,0.516919220600519,0.952587382566147,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0.532427418478012,0.476872379894642,0.145346416632329,0.564656282491984,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.29551344712669,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.429742108096597,0.57386499620653,0.441182838239031,0.927471342481686 | ||
|short_description=p8@Tns3 | |short_description=p8@Tns3 | ||
}} | }} |
Latest revision as of 20:35, 25 September 2015
Short description: | p8@Tns3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Tns3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2000 |
Association with transcript: | -68bp_to_uc007hzj.1_5end |
EntrezGene: | Tns3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.37e-11 | 7 |
muscle precursor cell | 1.34e-09 | 6 |
muscle cell | 1.34e-09 | 6 |
myoblast | 1.34e-09 | 6 |
embryonic cell | 1.60e-09 | 70 |
migratory neural crest cell | 1.78e-08 | 10 |
neuron associated cell | 1.78e-08 | 10 |
glial cell (sensu Vertebrata) | 1.78e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.78e-08 | 10 |
glial cell | 1.78e-08 | 10 |
glioblast | 1.78e-08 | 10 |
glioblast (sensu Vertebrata) | 1.78e-08 | 10 |
oligodendrocyte | 5.25e-08 | 6 |
macroglial cell | 5.25e-08 | 6 |
astrocyte | 5.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung | 1.70e-12 | 14 |
respiratory tube | 1.70e-12 | 14 |
respiration organ | 1.70e-12 | 14 |
pair of lungs | 1.70e-12 | 14 |
lung primordium | 1.70e-12 | 14 |
lung bud | 1.70e-12 | 14 |
thoracic cavity element | 1.67e-11 | 17 |
thoracic segment organ | 1.67e-11 | 17 |
thoracic cavity | 1.67e-11 | 17 |
thoracic segment of trunk | 1.67e-11 | 17 |
respiratory primordium | 1.67e-11 | 17 |
endoderm of foregut | 1.67e-11 | 17 |
epithelial fold | 4.88e-11 | 20 |
epithelial bud | 8.08e-10 | 17 |
tube | 1.27e-09 | 114 |
cardiovascular system | 4.23e-09 | 23 |
circulatory system | 4.23e-09 | 23 |
anatomical conduit | 2.11e-08 | 122 |
epithelium | 4.87e-07 | 174 |
cell layer | 7.67e-07 | 176 |