FFCP PHASE1:Mm9::chr16:91729561..91729635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16443 | |EntrezGene=16443 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PUZ2,E9Q0N0,Q6NZJ5,E9Q3I8,E9Q3I5,F8VQE5,Q9Z0R4,Q8C4B5 | |UniProt=E9PUZ2,E9Q0N0,Q6NZJ5,E9Q3I8,E9Q3I5,F8VQE5,Q9Z0R4,Q8C4B5 | ||
|association_with_transcript=0bp_to_ENSMUST00000056482,ENSMUST00000064797,ENSMUST00000095909,ENSMUST00000113996,ENSMUST00000113999,ENSMUST00000114002,NM_001110275,NM_001110276,NM_010587,uc007zyh.1,uc007zyi.2,uc007zyj.1_5end | |association_with_transcript=0bp_to_ENSMUST00000056482,ENSMUST00000064797,ENSMUST00000095909,ENSMUST00000113996,ENSMUST00000113999,ENSMUST00000114002,NM_001110275,NM_001110276,NM_010587,uc007zyh.1,uc007zyi.2,uc007zyj.1_5end | ||
|cluster_id=chr16:91729561..91729635,+ | |||
|description=CAGE_peak_1_at_Itsn1_5end | |description=CAGE_peak_1_at_Itsn1_5end | ||
|id=chr16:91729561..91729635,+ | |id=chr16:91729561..91729635,+ | ||
Latest revision as of 20:45, 25 September 2015
| Short description: | p1@Itsn1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Itsn1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000056482, ENSMUST00000064797, ENSMUST00000095909, ENSMUST00000113996, ENSMUST00000113999, ENSMUST00000114002, NM_001110275, NM_001110276, NM_010587, uc007zyh.1, uc007zyi.2, uc007zyj.1_5end |
| EntrezGene: | Itsn1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ectodermal cell | 2.79e-18 | 44 |
| neurectodermal cell | 2.79e-18 | 44 |
| neural cell | 6.81e-18 | 43 |
| neuron | 2.24e-15 | 33 |
| neuronal stem cell | 2.24e-15 | 33 |
| neuroblast | 2.24e-15 | 33 |
| electrically signaling cell | 2.24e-15 | 33 |
| electrically responsive cell | 1.34e-14 | 39 |
| electrically active cell | 1.34e-14 | 39 |
| CNS neuron (sensu Vertebrata) | 6.27e-14 | 23 |
| neuroblast (sensu Vertebrata) | 6.27e-14 | 23 |
| embryonic cell | 3.19e-12 | 70 |
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 5.41e-17 | 75 |
| ectoderm-derived structure | 5.82e-17 | 95 |
| ectoderm | 5.82e-17 | 95 |
| presumptive ectoderm | 5.82e-17 | 95 |
| central nervous system | 3.80e-16 | 73 |
| ecto-epithelium | 6.93e-12 | 73 |
| neurectoderm | 1.77e-11 | 64 |
| neural plate | 1.77e-11 | 64 |
| presumptive neural plate | 1.77e-11 | 64 |
| regional part of nervous system | 4.89e-11 | 54 |
| structure with developmental contribution from neural crest | 1.52e-10 | 92 |
| neural tube | 5.10e-10 | 52 |
| neural rod | 5.10e-10 | 52 |
| future spinal cord | 5.10e-10 | 52 |
| neural keel | 5.10e-10 | 52 |
| gray matter | 7.08e-09 | 34 |
| regional part of brain | 1.09e-07 | 46 |
| brain | 1.73e-07 | 47 |
| future brain | 1.73e-07 | 47 |
| pre-chordal neural plate | 1.93e-07 | 49 |
| brain grey matter | 7.11e-07 | 29 |
| regional part of telencephalon | 7.11e-07 | 29 |
| telencephalon | 7.11e-07 | 29 |
