FFCP PHASE1:Mm9::chr8:87125319..87125339,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12286 | |EntrezGene=12286 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000143215_5end | |association_with_transcript=0bp_to_ENSMUST00000143215_5end | ||
|cluster_id=chr8:87125319..87125339,+ | |||
|description=CAGE_peak_5_at_Cacna1a_5end | |description=CAGE_peak_5_at_Cacna1a_5end | ||
|id=chr8:87125319..87125339,+ | |id=chr8:87125319..87125339,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.91e-11,9;CL:0000789,7.91e-11,9;CL:0002420,7.91e-11,9;CL:0002419,7.91e-11,9;CL:0000790,7.91e-11,9;CL:0000624,2.30e-09,8;CL:0000542,4.21e-09,13;CL:0000051,4.21e-09,13;CL:0000084,1.19e-08,11;CL:0000827,1.19e-08,11;CL:0000838,7.81e-08,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!1.93e-08!24;UBERON:0001557!1.93e-08!24;UBERON:0001042!1.93e-08!24;UBERON:0008814!1.93e-08!24;UBERON:0009145!1.93e-08!24;UBERON:0003408!2.22e-08!24;UBERON:0000072!8.58e-08!27;UBERON:0002370!8.69e-08!23;UBERON:0000974!8.69e-08!23;UBERON:0004807!8.69e-08!23;UBERON:0005058!8.69e-08!23;UBERON:0003351!8.69e-08!23;UBERON:0009113!8.69e-08!23;UBERON:0003295!8.69e-08!23;UBERON:0009722!8.69e-08!23;UBERON:0005562!8.69e-08!23;UBERON:0007690!8.69e-08!23;UBERON:0003081!1.35e-07!88;UBERON:0004177!1.89e-07!29;UBERON:0001048!8.57e-07!147 | |ontology_enrichment_uberon=UBERON:0006562!1.93e-08!24;UBERON:0001557!1.93e-08!24;UBERON:0001042!1.93e-08!24;UBERON:0008814!1.93e-08!24;UBERON:0009145!1.93e-08!24;UBERON:0003408!2.22e-08!24;UBERON:0000072!8.58e-08!27;UBERON:0002370!8.69e-08!23;UBERON:0000974!8.69e-08!23;UBERON:0004807!8.69e-08!23;UBERON:0005058!8.69e-08!23;UBERON:0003351!8.69e-08!23;UBERON:0009113!8.69e-08!23;UBERON:0003295!8.69e-08!23;UBERON:0009722!8.69e-08!23;UBERON:0005562!8.69e-08!23;UBERON:0007690!8.69e-08!23;UBERON:0003081!1.35e-07!88;UBERON:0004177!1.89e-07!29;UBERON:0001048!8.57e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002530,2.67e-09,65;UBERON:0006562,1.93e-08,24;UBERON:0001557,1.93e-08,24;UBERON:0001042,1.93e-08,24;UBERON:0008814,1.93e-08,24;UBERON:0009145,1.93e-08,24;UBERON:0003408,2.47e-08,24;UBERON:0000072,3.04e-07,27;UBERON:0000077,3.55e-07,35;UBERON:0000161,3.67e-07,5;UBERON:0002370,3.71e-07,23;UBERON:0000974,3.71e-07,23;UBERON:0004807,3.71e-07,23;UBERON:0005058,3.71e-07,23;UBERON:0003351,3.71e-07,23;UBERON:0009113,3.71e-07,23;UBERON:0003295,3.71e-07,23;UBERON:0009722,3.71e-07,23;UBERON:0005562,3.71e-07,23;UBERON:0007690,3.71e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,1.83025338797167,0.468129052643987,3.08192342805909,0.8774937489487,7.53283211697305,1.39872643870396,0.333109761815663,0,0,0.473193248037357,1.50825876966313,2.12194825899015,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0,5.95557132388495,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0,0.247194967734374,1.44599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.585561594023094,1.46612694769419,0.255457055208591,0,0,0,0,0,0.502617408451458,0.173824320192276,0,0,0.486723789203273,0.305518091550949,0.248813941220186,2.77995034277042,0.841767423545896,0.650602214813519,0,0.180062129805349,0.60281927134286,0.136072998302656,0.384341160854549,0.281105173679186,0.258703370739016,0,0.189106080167819,0.703804496655795,0.43839146485515,0,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,0.828503090142008,0.234526059981096,1.62055855314913,2.3674473558521,1.37734962223183,0.925602677324269,2.09280550275367,0.804820204198858,1.05088808130453,0.987359099480883,0.820837320395476,0.324275238183423,0.584799949701329,0.658650345873152,0.268412837520744,0,0,0.660837565967596,0,1.2797295032114,1.39342003116263,0.128867461322093,0.80673409849337,0.889512175379481,0.951128130562796,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.210407459670956,0.189709611372772,0,0.470996183524124,0.246794327843601,0,0,0.393117990226406,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.335012514883631,0,0,0.315270288212382,0,0,0.163863314715738,1.03610989119537,0.433947175744535,0,0,4.42587845717133,2.20749397043786,0.160550589987792,0.35163505977661,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.642642632843614,1.13552068166615,0.712262414669021,0.325773918707152,0.659880491890142,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,11.9153862013826,0.900305470156551,1.03486947026204,1.71469628025274,2.30542303734956,2.14042581122485,0.329098041204242,0,0.469343416127421,0.42366414172764,2.42581237860458,0.98931751764888,0.645857706783622,0.482503399425247,0.477489376012546,0.656563598980245,0,0.370850604021019,1.53783792718067,0.412773735926445,0,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0.559805809294632,0.138199973804424,0,2.21435195506795,0.609958401380546,0.432021363287205,0.418176592028937,0,0.134864346384821,0.578574190077352,0,0.648074866458964,1.86401793926078,0,0,0.496375471371293,0,0.129159823477731,0.506868376472335,0.352071715937262,0,0.104859344425711,0,0,0.948033361884535,0.810900861160657,0.924398614483445,0.389762468933385,1.43221356533985,0.596044064343795,0.841368146639782,0.886137163047463,1.71642964911851,0.457240839929999,1.31074040677893,1.36441033035653,1.6356013078856,1.63627663054197,4.76133805591944,0,0,0,0.579568782096571,0.187682475451182,1.09890974560359,1.07184189539533,1.00314420807073,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0.207574695168353,0.399024873401031,0,0,0.209613162627982,0,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.287177344778066,0,0,0.38581844092741,0,0.441596760403192,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.591026894253381,0.409231043169689,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,2.06597317506522,1.83025338797167,0.468129052643987,3.08192342805909,0.8774937489487,7.53283211697305,1.39872643870396,0.333109761815663,0,0,0.473193248037357,1.50825876966313,2.12194825899015,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0,5.95557132388495,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0,0.247194967734374,1.44599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.585561594023094,1.46612694769419,0.255457055208591,0,0,0,0,0,0.502617408451458,0.173824320192276,0,0,0.486723789203273,0.305518091550949,0.248813941220186,2.77995034277042,0.841767423545896,0.650602214813519,0,0.180062129805349,0.60281927134286,0.136072998302656,0.384341160854549,0.281105173679186,0.258703370739016,0,0.189106080167819,0.703804496655795,0.43839146485515,0,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,0.828503090142008,0.234526059981096,1.62055855314913,2.3674473558521,1.37734962223183,0.925602677324269,2.09280550275367,0.804820204198858,1.05088808130453,0.987359099480883,0.820837320395476,0.324275238183423,0.584799949701329,0.658650345873152,0.268412837520744,0,0,0.660837565967596,0,1.2797295032114,1.39342003116263,0.128867461322093,0.80673409849337,0.889512175379481,0.951128130562796,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.210407459670956,0.189709611372772,0,0.470996183524124,0.246794327843601,0,0,0.393117990226406,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.335012514883631,0,0,0.315270288212382,0,0,0.163863314715738,1.03610989119537,0.433947175744535,0,0,4.42587845717133,2.20749397043786,0.160550589987792,0.35163505977661,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.642642632843614,1.13552068166615,0.712262414669021,0.325773918707152,0.659880491890142,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,11.9153862013826,0.900305470156551,1.03486947026204,1.71469628025274,2.30542303734956,2.14042581122485,0.329098041204242,0,0.469343416127421,0.42366414172764,2.42581237860458,0.98931751764888,0.645857706783622,0.482503399425247,0.477489376012546,0.656563598980245,0,0.370850604021019,1.53783792718067,0.412773735926445,0,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0.559805809294632,0.138199973804424,0,2.21435195506795,0.609958401380546,0.432021363287205,0.418176592028937,0,0.134864346384821,0.578574190077352,0,0.648074866458964,1.86401793926078,0,0,0.496375471371293,0,0.129159823477731,0.506868376472335,0.352071715937262,0,0.104859344425711,0,0,0.948033361884535,0.810900861160657,0.924398614483445,0.389762468933385,1.43221356533985,0.596044064343795,0.841368146639782,0.886137163047463,1.71642964911851,0.457240839929999,1.31074040677893,1.36441033035653,1.6356013078856,1.63627663054197,4.76133805591944,0,0,0,0.579568782096571,0.187682475451182,1.09890974560359,1.07184189539533,1.00314420807073,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0.207574695168353,0.399024873401031,0,0,0.209613162627982,0,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.287177344778066,0,0,0.38581844092741,0,0.441596760403192,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.591026894253381,0.409231043169689,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p5@Cacna1a | |short_description=p5@Cacna1a | ||
}} | }} |
Latest revision as of 21:27, 25 September 2015
Short description: | p5@Cacna1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cacna1a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000143215_5end |
EntrezGene: | Cacna1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.91e-11 | 9 |
alpha-beta T cell | 7.91e-11 | 9 |
immature T cell | 7.91e-11 | 9 |
mature T cell | 7.91e-11 | 9 |
immature alpha-beta T cell | 7.91e-11 | 9 |
CD4-positive, alpha-beta T cell | 2.30e-09 | 8 |
lymphocyte | 4.21e-09 | 13 |
common lymphoid progenitor | 4.21e-09 | 13 |
T cell | 1.19e-08 | 11 |
pro-T cell | 1.19e-08 | 11 |
lymphoid lineage restricted progenitor cell | 7.81e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
gland | 2.67e-09 | 65 |
pharynx | 1.93e-08 | 24 |
upper respiratory tract | 1.93e-08 | 24 |
chordate pharynx | 1.93e-08 | 24 |
pharyngeal arch system | 1.93e-08 | 24 |
pharyngeal region of foregut | 1.93e-08 | 24 |
gland of gut | 2.47e-08 | 24 |
segment of respiratory tract | 3.04e-07 | 27 |
mixed endoderm/mesoderm-derived structure | 3.55e-07 | 35 |
orifice | 3.67e-07 | 5 |
thymus | 3.71e-07 | 23 |
neck | 3.71e-07 | 23 |
respiratory system epithelium | 3.71e-07 | 23 |
hemolymphoid system gland | 3.71e-07 | 23 |
pharyngeal epithelium | 3.71e-07 | 23 |
thymic region | 3.71e-07 | 23 |
pharyngeal gland | 3.71e-07 | 23 |
entire pharyngeal arch endoderm | 3.71e-07 | 23 |
thymus primordium | 3.71e-07 | 23 |
early pharyngeal endoderm | 3.71e-07 | 23 |