FFCP PHASE1:Mm9::chr2:151736940..151736948,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11602 | |EntrezGene=11602 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3173 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WVH6 | |UniProt=Q9WVH6 | ||
|association_with_transcript=0bp_to_ENSMUST00000028955,ENSMUST00000168220_5end | |association_with_transcript=0bp_to_ENSMUST00000028955,ENSMUST00000168220_5end | ||
|cluster_id=chr2:151736940..151736948,+ | |||
|description=CAGE_peak_1_at_Angpt4_5end | |description=CAGE_peak_1_at_Angpt4_5end | ||
|id=chr2:151736940..151736948,+ | |id=chr2:151736940..151736948,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,9.20e-09,10;CL:0000095,9.20e-09,10;CL:0000243,9.20e-09,10;CL:0000123,9.20e-09,10;CL:0000125,9.20e-09,10;CL:0000030,9.20e-09,10;CL:0000339,9.20e-09,10;CL:0000222,8.55e-08,7;CL:0000680,5.16e-07,6;CL:0000187,5.16e-07,6;CL:0000056,5.16e-07,6;CL:0002453,6.66e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!4.70e-12!26;UBERON:0000990!4.70e-12!26;UBERON:0003133!1.68e-11!24;UBERON:0000991!1.97e-08!18;UBERON:0005564!1.97e-08!18;UBERON:0003101!2.39e-08!16;UBERON:0000079!2.39e-08!16;UBERON:0004176!3.17e-08!17;UBERON:0009196!3.17e-08!17;UBERON:0009117!3.17e-08!17;UBERON:0003135!9.84e-08!15;UBERON:0000473!3.96e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,8.84e-13,26;UBERON:0000990,8.84e-13,26;UBERON:0003133,1.38e-12,24;UBERON:0000926,7.60e-11,120;UBERON:0004120,7.60e-11,120;UBERON:0006603,7.60e-11,120;UBERON:0003101,8.19e-11,16;UBERON:0000079,8.19e-11,16;UBERON:0003135,7.85e-10,15;UBERON:0004176,1.70e-09,17;UBERON:0009196,1.70e-09,17;UBERON:0009117,1.70e-09,17;UBERON:0000473,7.16e-09,14;UBERON:0000991,9.54e-09,18;UBERON:0005564,9.54e-09,18;UBERON:0004175,5.66e-08,9;UBERON:0006554,1.69e-07,18;UBERON:0001008,6.39e-07,19 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55380907853464,3.85232338634155,13.3989129078028,0,36.4102011155346,45.4750398260357,96.2428000417703,17.6382891247957,2.87505128729943,0,0,0,2.57259436035947,11.1748041576115,4.64104883049698,0.202316460859598,0,0,0.677689064138264,1.77858959222228,24.7472422252385,26.6993917893083,19.1829631035447,2.09720077362883,2.30530983192933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,5.60373830665562,7.02815508993105,3.18850937571846,0,0,0,0,0,2.66844398250329,11.4188316127299,14.2882302531578,13.7802434059033,0,97.5281228348816,58.6052051325285,28.4426681261332,0.432982082022428,1.26679932737549,1.01104889002957,0.34255163915718,0,1.48442139064825,0.346970653532272,1.21786191324856,1.84492397804847,1.05505848386836,0.705532242814229,0.376999773989026,3.21353458054686,2.74738778147832,7.96149496754887,2.58826959915855,1.98757366614354,6.78825354389311,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,2.95334155165917,6.59356944233493,8.84529654517861,0,0.260240885925407,0,0.180062129805349,1.50704817835715,0.340182495756639,0.12811372028485,0.562210347358373,1.29351685369508,0,0,0,0,0,0,0.411564272815887,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.658650345873152,0.268412837520744,0,0,0,0.528901133327089,1.49301775374664,0.928946687441754,0.128867461322093,0.201683524623343,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,0,0.596869416123452,0.19496408711912,0,0.648414149624083,0.199141273254367,0.758671603812327,0.571242563048644,2.25415471346161,1.22190796707189,1.35766741017338,0.98190147846446,1.39120381673366,0.885660887877613,0.156998727841375,1.23397163921801,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0.964887042726734,0.739012760666419,0.947457058852424,0.162964976442026,0.169745085775188,0,1.17254380209271,0.476087281772027,0.585400943573396,0.157635144106191,0.8858587585951,0.318909537314974,0.327726629431476,1.55416483679306,0.144649058581512,0,0,0,0,0,0.117211686592203,0,1.00988370881749,0,0.390438744296638,0,0.716906393857656,0,0.566153061577665,0.809621403349789,0,0,0,3.54850213020672,2.49291845134157,0.977321756121456,0.494910368917606,0,0.971122544619926,0.302323556964751,1.13163047853539,0.885905678642318,0.922305443831782,0.516856586336442,0.727067458955011,0,0.632073515871632,0,0,0,0,0.388076051348264,0.857348140126369,0.532020700926821,2.49716344642899,7.73380396829969,6.08929898229199,84.4818149029357,26.6908409288413,9.2621927183084,2.14352128823924,0,0.361877549568935,0.477489376012546,0.492422699235184,0,0,0.341741761595705,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,1.16653475962614,0,0.56369293868419,1.04661582230785,0.66183396182839,2.72231663681667,4.00395452780966,5.23763989021412,3.63807439801837,3.3853140059427,2.62148361064277,2.89900944991207,3.45636007509439,0.316011120628178,0.608175645870493,5.85452455839515,5.3267537420896,2.50637373934474,3.17890167650024,0.480781798079875,0.147689527174577,0.302899349844443,0.15241361331,0,0.0974578807397524,0.288635524920988,0.233753804363138,0.226730383615211,0.221985953374065,0,0.335769232728157,4.82973985080476,44.2930642064789,1.64836461840539,0.643105137237198,6.52043735245972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.888986911206461,0.618105171716683,0.320919209591815,0.505394423527595,0.760437899670719,0.943131706930381,0.842773567228942,0.89635213366817,0.287177344778066,0.476293691283074,0.579421629724277,0.192909220463705,1.23625770240992,0.588795680537589,0.685738504770831,0.177475806159338,0.476872379894642,1.0174249164263,0.564656282491984,0.930760686808441,0.914639864363863,1.31534855718921,0.135804113845862,1.68342681497322,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,2.49810577937946,1.63752125911786,1.07435527024149,1.3390183244819,1.76473135295612,0.695603506861264 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55380907853464,3.85232338634155,13.3989129078028,0,36.4102011155346,45.4750398260357,96.2428000417703,17.6382891247957,2.87505128729943,0,0,0,2.57259436035947,11.1748041576115,4.64104883049698,0.202316460859598,0,0,0.677689064138264,1.77858959222228,24.7472422252385,26.6993917893083,19.1829631035447,2.09720077362883,2.30530983192933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,5.60373830665562,7.02815508993105,3.18850937571846,0,0,0,0,0,2.66844398250329,11.4188316127299,14.2882302531578,13.7802434059033,0,97.5281228348816,58.6052051325285,28.4426681261332,0.432982082022428,1.26679932737549,1.01104889002957,0.34255163915718,0,1.48442139064825,0.346970653532272,1.21786191324856,1.84492397804847,1.05505848386836,0.705532242814229,0.376999773989026,3.21353458054686,2.74738778147832,7.96149496754887,2.58826959915855,1.98757366614354,6.78825354389311,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,2.95334155165917,6.59356944233493,8.84529654517861,0,0.260240885925407,0,0.180062129805349,1.50704817835715,0.340182495756639,0.12811372028485,0.562210347358373,1.29351685369508,0,0,0,0,0,0,0.411564272815887,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.658650345873152,0.268412837520744,0,0,0,0.528901133327089,1.49301775374664,0.928946687441754,0.128867461322093,0.201683524623343,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,0,0.596869416123452,0.19496408711912,0,0.648414149624083,0.199141273254367,0.758671603812327,0.571242563048644,2.25415471346161,1.22190796707189,1.35766741017338,0.98190147846446,1.39120381673366,0.885660887877613,0.156998727841375,1.23397163921801,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0.964887042726734,0.739012760666419,0.947457058852424,0.162964976442026,0.169745085775188,0,1.17254380209271,0.476087281772027,0.585400943573396,0.157635144106191,0.8858587585951,0.318909537314974,0.327726629431476,1.55416483679306,0.144649058581512,0,0,0,0,0,0.117211686592203,0,1.00988370881749,0,0.390438744296638,0,0.716906393857656,0,0.566153061577665,0.809621403349789,0,0,0,3.54850213020672,2.49291845134157,0.977321756121456,0.494910368917606,0,0.971122544619926,0.302323556964751,1.13163047853539,0.885905678642318,0.922305443831782,0.516856586336442,0.727067458955011,0,0.632073515871632,0,0,0,0,0.388076051348264,0.857348140126369,0.532020700926821,2.49716344642899,7.73380396829969,6.08929898229199,84.4818149029357,26.6908409288413,9.2621927183084,2.14352128823924,0,0.361877549568935,0.477489376012546,0.492422699235184,0,0,0.341741761595705,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,1.16653475962614,0,0.56369293868419,1.04661582230785,0.66183396182839,2.72231663681667,4.00395452780966,5.23763989021412,3.63807439801837,3.3853140059427,2.62148361064277,2.89900944991207,3.45636007509439,0.316011120628178,0.608175645870493,5.85452455839515,5.3267537420896,2.50637373934474,3.17890167650024,0.480781798079875,0.147689527174577,0.302899349844443,0.15241361331,0,0.0974578807397524,0.288635524920988,0.233753804363138,0.226730383615211,0.221985953374065,0,0.335769232728157,4.82973985080476,44.2930642064789,1.64836461840539,0.643105137237198,6.52043735245972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.888986911206461,0.618105171716683,0.320919209591815,0.505394423527595,0.760437899670719,0.943131706930381,0.842773567228942,0.89635213366817,0.287177344778066,0.476293691283074,0.579421629724277,0.192909220463705,1.23625770240992,0.588795680537589,0.685738504770831,0.177475806159338,0.476872379894642,1.0174249164263,0.564656282491984,0.930760686808441,0.914639864363863,1.31534855718921,0.135804113845862,1.68342681497322,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,2.49810577937946,1.63752125911786,1.07435527024149,1.3390183244819,1.76473135295612,0.695603506861264 | ||
|short_description=p1@Angpt4 | |short_description=p1@Angpt4 | ||
}} | }} |
Latest revision as of 21:43, 25 September 2015
Short description: | p1@Angpt4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Angpt4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3173 |
Association with transcript: | 0bp_to_ENSMUST00000028955, ENSMUST00000168220_5end |
EntrezGene: | Angpt4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 9.20e-09 | 10 |
neuron associated cell | 9.20e-09 | 10 |
glial cell (sensu Vertebrata) | 9.20e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 9.20e-09 | 10 |
glial cell | 9.20e-09 | 10 |
glioblast | 9.20e-09 | 10 |
glioblast (sensu Vertebrata) | 9.20e-09 | 10 |
mesodermal cell | 8.55e-08 | 7 |
muscle precursor cell | 5.16e-07 | 6 |
muscle cell | 5.16e-07 | 6 |
myoblast | 5.16e-07 | 6 |
oligodendrocyte precursor cell | 6.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 8.84e-13 | 26 |
reproductive system | 8.84e-13 | 26 |
reproductive organ | 1.38e-12 | 24 |
mesoderm | 7.60e-11 | 120 |
mesoderm-derived structure | 7.60e-11 | 120 |
presumptive mesoderm | 7.60e-11 | 120 |
male organism | 8.19e-11 | 16 |
male reproductive system | 8.19e-11 | 16 |
male reproductive organ | 7.85e-10 | 15 |
external genitalia | 1.70e-09 | 17 |
indifferent external genitalia | 1.70e-09 | 17 |
indifferent gonad | 1.70e-09 | 17 |
testis | 7.16e-09 | 14 |
gonad | 9.54e-09 | 18 |
gonad primordium | 9.54e-09 | 18 |
internal genitalia | 5.66e-08 | 9 |
urinary system structure | 1.69e-07 | 18 |
renal system | 6.39e-07 | 19 |