FFCP PHASE1:Mm9::chr2:152223852..152223872,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20667 | |EntrezGene=20667 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q04890 | |UniProt=Q04890 | ||
|association_with_transcript=-70bp_to_ENSMUST00000063332,NM_011438,uc008nfi.1_5end | |association_with_transcript=-70bp_to_ENSMUST00000063332,NM_011438,uc008nfi.1_5end | ||
|cluster_id=chr2:152223852..152223872,- | |||
|description=CAGE_peak_7_at_Sox12_5end | |description=CAGE_peak_7_at_Sox12_5end | ||
|id=chr2:152223852..152223872,- | |id=chr2:152223852..152223872,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.87e-10,6;CL:0000117,2.50e-08,23;CL:0000337,2.50e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,3.64169629547276,1.05798195854407,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,5.59923906465779,4.59020190327748,3.99617426567626,1.14260393761521,0.662605622854841,3.67472397644862,3.73797336971122,2.75765635983006,0,0.127687338085188,0.153606533256243,2.63772575460388,2.10421580285542,3.64639359389732,0.279182999001381,0,0,0.589257170947335,0.711858403995515,1.67759501242771,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,1.21439728736295,0,0.691846491768175,0.452167921657868,1.05829836422134,0.251333182659351,0,0,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0,0.599902730993408,0,0.299581278809645,0.457500602818626,2.01046963380583,0,0,0,0.324482526135515,1.12023300235348,0.124406970610093,0.252722758433675,0,1.69156575851515,0.459804208866946,1.44049703844279,0.60281927134286,1.2246569847239,1.0249097622788,1.68663104207512,0.776110112217047,4.52692785158969,2.45837904218165,3.34307135911503,2.19195732427575,0.278047249225598,0.696504333044333,0,2.7864797354589,0,0.257347907114715,0,1.86413195281952,1.87620847984877,1.62055855314913,2.60419209143731,1.18058539048442,2.00547246753592,0.465067889500816,0.536546802799238,1.16765342367169,0.987359099480883,0.492502392237286,0.729619285912702,0.292399974850665,0.439100230582101,0.671032093801859,0,1.13195073617213,0,0,2.13288250535234,1.85789337488351,0.902072229254653,0.403367049246685,0.444756087689741,0.570676878337677,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,2.0863469104839,1.02823661348756,0,0.610953983535943,0.387904974335251,0.631222379012867,0.69560190836683,0.295220295959204,0.31399745568275,0.370191491765402,0,0.333690211432188,0.589676985339609,0.899448449539415,0.202860121388503,0,0.25462585178142,0.287696137450811,0.648540907100142,0,0,0,0,0,0.179397413521912,0.482443521363367,0,2.08440552947533,2.11854469374634,0.509235257325564,1.40814148973101,1.67506257441816,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0.478364305972461,0.163863314715738,0,0,0,0,0,0.551873492609465,0.160550589987792,0.117211686592203,0.491804836130026,0.504941854408746,0,0.390438744296638,0.646270193198397,0.477937595905104,0.445597348164788,1.41538265394416,0.404810701674894,0.584511715822624,0,0,0.99358059645788,1.06839362200353,2.28041743095006,0,0,0.971122544619926,0.302323556964751,0.754420319023592,0,0.307435147943927,0.258428293168221,0.727067458955011,0,0.316036757935816,1.05418608574999,0,0.340439605753788,1.26042765821917,1.81102157295856,1.71469628025274,1.59606210278046,0.891844088010353,0.658196082408484,0.304464949114599,0,0,0,0,0.322928853391811,0.361877549568935,0.119372344003136,0,0.291480836629851,0.556275906031529,0.170870880797853,1.44470807574256,0.925972636848558,0.376736914009382,0.27338845544205,0,0.339956859987711,0,0.414599921413271,0,3.63786392618306,1.42323626988794,0.972048067396211,0.836353184057875,0.218362563746178,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0.56369293868419,1.94371509857172,1.82004339502807,1.94451188344048,1.42075805825504,1.18269287843545,1.05621514781179,0.911430693907651,0.734015410979976,0.483168241652012,0,0,0.608175645870493,0.924398614483445,0,0.358053391334963,0.79472541912506,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,1.09890974560359,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,3.32119512269365,2.39414924040619,1.53660245178721,0.486213434136588,1.04806581313991,1.2869045591501,0.666740183404846,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,1.32038438970253,0.561849044819294,0.768301828858431,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0.883193520806384,0.685738504770831,0.532427418478012,1.1921809497366,0.581385666529314,1.12931256498397,0.25384382367503,0.365855945745545,1.05227884575137,0.814824683075171,1.12228454331548,0.949080144993393,0.492522411877817,0,0.464810523557898,0.578719832943424,0.999242311751784,0.233931608445408,0.859484216193193,0.956441660344217,0.882365676478062,0.695603506861264 | |phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,3.64169629547276,1.05798195854407,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,5.59923906465779,4.59020190327748,3.99617426567626,1.14260393761521,0.662605622854841,3.67472397644862,3.73797336971122,2.75765635983006,0,0.127687338085188,0.153606533256243,2.63772575460388,2.10421580285542,3.64639359389732,0.279182999001381,0,0,0.589257170947335,0.711858403995515,1.67759501242771,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,1.21439728736295,0,0.691846491768175,0.452167921657868,1.05829836422134,0.251333182659351,0,0,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0,0.599902730993408,0,0.299581278809645,0.457500602818626,2.01046963380583,0,0,0,0.324482526135515,1.12023300235348,0.124406970610093,0.252722758433675,0,1.69156575851515,0.459804208866946,1.44049703844279,0.60281927134286,1.2246569847239,1.0249097622788,1.68663104207512,0.776110112217047,4.52692785158969,2.45837904218165,3.34307135911503,2.19195732427575,0.278047249225598,0.696504333044333,0,2.7864797354589,0,0.257347907114715,0,1.86413195281952,1.87620847984877,1.62055855314913,2.60419209143731,1.18058539048442,2.00547246753592,0.465067889500816,0.536546802799238,1.16765342367169,0.987359099480883,0.492502392237286,0.729619285912702,0.292399974850665,0.439100230582101,0.671032093801859,0,1.13195073617213,0,0,2.13288250535234,1.85789337488351,0.902072229254653,0.403367049246685,0.444756087689741,0.570676878337677,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,2.0863469104839,1.02823661348756,0,0.610953983535943,0.387904974335251,0.631222379012867,0.69560190836683,0.295220295959204,0.31399745568275,0.370191491765402,0,0.333690211432188,0.589676985339609,0.899448449539415,0.202860121388503,0,0.25462585178142,0.287696137450811,0.648540907100142,0,0,0,0,0,0.179397413521912,0.482443521363367,0,2.08440552947533,2.11854469374634,0.509235257325564,1.40814148973101,1.67506257441816,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0.478364305972461,0.163863314715738,0,0,0,0,0,0.551873492609465,0.160550589987792,0.117211686592203,0.491804836130026,0.504941854408746,0,0.390438744296638,0.646270193198397,0.477937595905104,0.445597348164788,1.41538265394416,0.404810701674894,0.584511715822624,0,0,0.99358059645788,1.06839362200353,2.28041743095006,0,0,0.971122544619926,0.302323556964751,0.754420319023592,0,0.307435147943927,0.258428293168221,0.727067458955011,0,0.316036757935816,1.05418608574999,0,0.340439605753788,1.26042765821917,1.81102157295856,1.71469628025274,1.59606210278046,0.891844088010353,0.658196082408484,0.304464949114599,0,0,0,0,0.322928853391811,0.361877549568935,0.119372344003136,0,0.291480836629851,0.556275906031529,0.170870880797853,1.44470807574256,0.925972636848558,0.376736914009382,0.27338845544205,0,0.339956859987711,0,0.414599921413271,0,3.63786392618306,1.42323626988794,0.972048067396211,0.836353184057875,0.218362563746178,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0.56369293868419,1.94371509857172,1.82004339502807,1.94451188344048,1.42075805825504,1.18269287843545,1.05621514781179,0.911430693907651,0.734015410979976,0.483168241652012,0,0,0.608175645870493,0.924398614483445,0,0.358053391334963,0.79472541912506,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,1.09890974560359,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,3.32119512269365,2.39414924040619,1.53660245178721,0.486213434136588,1.04806581313991,1.2869045591501,0.666740183404846,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,1.32038438970253,0.561849044819294,0.768301828858431,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0.883193520806384,0.685738504770831,0.532427418478012,1.1921809497366,0.581385666529314,1.12931256498397,0.25384382367503,0.365855945745545,1.05227884575137,0.814824683075171,1.12228454331548,0.949080144993393,0.492522411877817,0,0.464810523557898,0.578719832943424,0.999242311751784,0.233931608445408,0.859484216193193,0.956441660344217,0.882365676478062,0.695603506861264 | ||
|short_description=p7@Sox12 | |short_description=p7@Sox12 | ||
}} | }} |
Latest revision as of 22:04, 25 September 2015
Short description: | p7@Sox12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sox12_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -70bp_to_ENSMUST00000063332, NM_011438, uc008nfi.1_5end |
EntrezGene: | Sox12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.87e-10 | 6 |
CNS neuron (sensu Vertebrata) | 2.50e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-08 | 23 |