FFCP PHASE1:Mm9::chr7:134170038..134170055,-: Difference between revisions
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{{FFCP|EntrezGene=17188|HGNC=|MCL_coexpression_id=13|UniProt=F8VPK3,P56671|association_with_transcript=-45bp_to_ENSMUST00000032916,NM_010772,uc009jub.1_5end|description=CAGE_peak_8_at_Maz_5end|id=chr7:134170038..134170055,-|ontology_enrichment_celltype=CL:0000540!8.36e-15!33;CL:0000047!8.36e-15!33;CL:0000031!8.36e-15!33;CL:0000404!8.36e-15!33;CL:0000117!1.90e-13!23;CL:0000337!1.90e-13!23;CL:0002319!1.54e-12!43;CL:0000221!1.65e-12!44;CL:0000133!1.65e-12!44;CL:0000393!5.90e-11!39;CL:0000211!5.90e-11!39;CL:0000055!5.58e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,8.08e-15,33;CL:0000047,8.08e-15,33;CL:0000031,8.08e-15,33;CL:0000404,8.08e-15,33;CL:0000117,1.85e-13,23;CL:0000337,1.85e-13,23;CL:0002319,1.50e-12,43;CL:0000221,1.61e-12,44;CL:0000133,1.61e-12,44;CL:0000393,6.49e-11,39;CL:0000211,6.49e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.04e-25!73;UBERON:0005743!3.04e-25!73;UBERON:0000073!4.47e-24!75;UBERON:0001016!4.47e-24!75;UBERON:0002346!2.35e-20!71;UBERON:0003075!2.35e-20!71;UBERON:0007284!2.35e-20!71;UBERON:0004121!2.94e-20!102;UBERON:0000924!2.94e-20!102;UBERON:0006601!2.94e-20!102;UBERON:0001049!1.96e-18!52;UBERON:0005068!1.96e-18!52;UBERON:0006241!1.96e-18!52;UBERON:0007135!1.96e-18!52;UBERON:0000033!7.27e-17!63;UBERON:0002616!9.40e-17!49;UBERON:0000955!1.41e-16!50;UBERON:0006238!1.41e-16!50;UBERON:0003056!1.72e-15!49;UBERON:0007811!2.35e-14!86;UBERON:0000153!9.23e-14!94;UBERON:0003080!1.31e-13!40;UBERON:0002780!4.33e-13!39;UBERON:0001890!4.33e-13!39;UBERON:0006240!4.33e-13!39;UBERON:0002020!1.50e-12!34;UBERON:0002791!1.28e-09!29;UBERON:0003528!1.28e-09!29;UBERON:0001893!1.28e-09!29;UBERON:0000956!9.03e-07!21;UBERON:0001869!9.03e-07!21;UBERON:0000203!9.03e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.86e-25,73;UBERON:0001016,4.22e-24,75;UBERON:0002346,5.18e-21,64;UBERON:0003075,5.18e-21,64;UBERON:0007284,5.18e-21,64;UBERON:0004121,2.79e-20,95;UBERON:0000924,2.79e-20,95;UBERON:0006601,2.79e-20,95;UBERON:0000073,5.60e-20,54;UBERON:0001049,1.87e-18,52;UBERON:0005068,1.87e-18,52;UBERON:0006241,1.87e-18,52;UBERON:0007135,1.87e-18,52;UBERON:0010371,1.64e-16,73;UBERON:0003056,1.66e-15,49;UBERON:0002616,6.74e-15,46;UBERON:0000955,9.89e-15,47;UBERON:0006238,9.89e-15,47;UBERON:0010314,7.31e-14,92;UBERON:0003080,1.27e-13,40;UBERON:0002780,4.20e-13,39;UBERON:0001890,4.20e-13,39;UBERON:0006240,4.20e-13,39;UBERON:0002020,1.45e-12,34;UBERON:0003528,1.25e-09,29;UBERON:0002791,1.25e-09,29;UBERON:0001893,1.25e-09,29;UBERON:0000956,8.91e-07,21;UBERON:0001869,8.91e-07,21;UBERON:0000203,8.91e-07,21|phase1_expression=2.7225304007815,0,1.36499771816861,0,0,2.68606835059024,2.56973904655078,3.22808308603941,1.12630977721333,0,1.54096171402954,1.59544317990673,2.22560948910567,1.74840804837995,1.66554880907831,2.02475267389826,2.09868563438444,0.788655413395594,0.959801035240171,1.69755860719212,3.74190476664707,3.67376519443276,1.30599894569468,1.59992422793407,1.14704640533585,0,0.430761996159075,0.861884930743556,1.33016393619462,1.26015064879965,1.99557459589774,0.635030673459631,2.46025915033828,0,2.3108129580102,2.82598897109437,3.06254034393554,0.418531630736908,0,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,1.51076181570693,1.31790010585369,0.734187008646726,2.34717403304412,3.2703773457067,3.51497892375155,2.13872888981712,1.67983705950435,7.18762821824858,1.00669563634642,2.17608642603403,2.35265659399725,2.82985379639542,2.86533439938757,3.09403255366465,9.71119012126069,9.52183762689659,11.4089652631112,2.03306719241479,3.55717918444456,6.74924787961049,2.96659908770092,4.2628806896766,5.09320187881288,5.37905627450176,6.11768712620018,6.88530285491622,5.67877395648731,8.2838785477103,6.84692476950002,7.4719387521122,3.92966431174769,5.51531271966013,8.8092704799511,7.53355294702608,7.83393319606842,7.51751840062105,5.39777097254217,11.4600941522487,8.09630697104005,5.6276261003168,5.80633341551878,7.95497180778903,7.40332740155335,12.3023634244698,2.27178579999552,1.96486056277642,1.15945795480671,0.860423876981386,2.03991400112325,3.2382191498269,1.94932925234301,3.13618820968135,1.68533304158102,3.57903677413921,5.19572009205738,3.88673531961374,3.66192891419369,0,2.54805239706646,7.11066703153331,0.649473123033642,0.506719730950197,1.51657333504435,1.82694207550496,1.8125651855302,1.33597925158342,5.89850111004862,2.74018930480927,3.92046345335299,3.46662073271032,3.88042733547826,3.76999773989026,0.988779870937496,1.3013942122792,1.76922110389975,4.04417124868523,3.97514733228708,3.39412677194655,1.86391761218122,7.31951992528868,9.00620839297857,1.27728527604296,2.27648736561249,1.19980546198682,0.635351135365324,6.74057877321702,2.74500361691176,6.15706325353036,4.69325664519146,2.81287003063364,8.51930982694196,6.97637431191358,5.6011650117674,1.49288364732112,1.51633655060205,1.68353484709179,6.50602214813519,4.82794419310293,9.54329287968351,7.9873553452929,8.02830689985669,6.021344853387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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17188 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=F8VPK3,P56671 | |||
|association_with_transcript=-45bp_to_ENSMUST00000032916,NM_010772,uc009jub.1_5end | |||
|cluster_id=chr7:134170038..134170055,- | |||
|description=CAGE_peak_8_at_Maz_5end | |||
|id=chr7:134170038..134170055,- | |||
|ontology_enrichment_celltype=CL:0000540!8.36e-15!33;CL:0000047!8.36e-15!33;CL:0000031!8.36e-15!33;CL:0000404!8.36e-15!33;CL:0000117!1.90e-13!23;CL:0000337!1.90e-13!23;CL:0002319!1.54e-12!43;CL:0000221!1.65e-12!44;CL:0000133!1.65e-12!44;CL:0000393!5.90e-11!39;CL:0000211!5.90e-11!39;CL:0000055!5.58e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.08e-15,33;CL:0000047,8.08e-15,33;CL:0000031,8.08e-15,33;CL:0000404,8.08e-15,33;CL:0000117,1.85e-13,23;CL:0000337,1.85e-13,23;CL:0002319,1.50e-12,43;CL:0000221,1.61e-12,44;CL:0000133,1.61e-12,44;CL:0000393,6.49e-11,39;CL:0000211,6.49e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.04e-25!73;UBERON:0005743!3.04e-25!73;UBERON:0000073!4.47e-24!75;UBERON:0001016!4.47e-24!75;UBERON:0002346!2.35e-20!71;UBERON:0003075!2.35e-20!71;UBERON:0007284!2.35e-20!71;UBERON:0004121!2.94e-20!102;UBERON:0000924!2.94e-20!102;UBERON:0006601!2.94e-20!102;UBERON:0001049!1.96e-18!52;UBERON:0005068!1.96e-18!52;UBERON:0006241!1.96e-18!52;UBERON:0007135!1.96e-18!52;UBERON:0000033!7.27e-17!63;UBERON:0002616!9.40e-17!49;UBERON:0000955!1.41e-16!50;UBERON:0006238!1.41e-16!50;UBERON:0003056!1.72e-15!49;UBERON:0007811!2.35e-14!86;UBERON:0000153!9.23e-14!94;UBERON:0003080!1.31e-13!40;UBERON:0002780!4.33e-13!39;UBERON:0001890!4.33e-13!39;UBERON:0006240!4.33e-13!39;UBERON:0002020!1.50e-12!34;UBERON:0002791!1.28e-09!29;UBERON:0003528!1.28e-09!29;UBERON:0001893!1.28e-09!29;UBERON:0000956!9.03e-07!21;UBERON:0001869!9.03e-07!21;UBERON:0000203!9.03e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.86e-25,73;UBERON:0001016,4.22e-24,75;UBERON:0002346,5.18e-21,64;UBERON:0003075,5.18e-21,64;UBERON:0007284,5.18e-21,64;UBERON:0004121,2.79e-20,95;UBERON:0000924,2.79e-20,95;UBERON:0006601,2.79e-20,95;UBERON:0000073,5.60e-20,54;UBERON:0001049,1.87e-18,52;UBERON:0005068,1.87e-18,52;UBERON:0006241,1.87e-18,52;UBERON:0007135,1.87e-18,52;UBERON:0010371,1.64e-16,73;UBERON:0003056,1.66e-15,49;UBERON:0002616,6.74e-15,46;UBERON:0000955,9.89e-15,47;UBERON:0006238,9.89e-15,47;UBERON:0010314,7.31e-14,92;UBERON:0003080,1.27e-13,40;UBERON:0002780,4.20e-13,39;UBERON:0001890,4.20e-13,39;UBERON:0006240,4.20e-13,39;UBERON:0002020,1.45e-12,34;UBERON:0003528,1.25e-09,29;UBERON:0002791,1.25e-09,29;UBERON:0001893,1.25e-09,29;UBERON:0000956,8.91e-07,21;UBERON:0001869,8.91e-07,21;UBERON:0000203,8.91e-07,21 | |||
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| |||
|short_description=p8@Maz | |||
}} |
Latest revision as of 22:12, 25 September 2015
Short description: | p8@Maz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Maz_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -45bp_to_ENSMUST00000032916, NM_010772, uc009jub.1_5end |
EntrezGene: | Maz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.08e-15 | 33 |
neuronal stem cell | 8.08e-15 | 33 |
neuroblast | 8.08e-15 | 33 |
electrically signaling cell | 8.08e-15 | 33 |
CNS neuron (sensu Vertebrata) | 1.85e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.85e-13 | 23 |
neural cell | 1.50e-12 | 43 |
ectodermal cell | 1.61e-12 | 44 |
neurectodermal cell | 1.61e-12 | 44 |
electrically responsive cell | 6.49e-11 | 39 |
electrically active cell | 6.49e-11 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.86e-25 | 73 |
nervous system | 4.22e-24 | 75 |
neurectoderm | 5.18e-21 | 64 |
neural plate | 5.18e-21 | 64 |
presumptive neural plate | 5.18e-21 | 64 |
ectoderm-derived structure | 2.79e-20 | 95 |
ectoderm | 2.79e-20 | 95 |
presumptive ectoderm | 2.79e-20 | 95 |
regional part of nervous system | 5.60e-20 | 54 |
neural tube | 1.87e-18 | 52 |
neural rod | 1.87e-18 | 52 |
future spinal cord | 1.87e-18 | 52 |
neural keel | 1.87e-18 | 52 |
ecto-epithelium | 1.64e-16 | 73 |
pre-chordal neural plate | 1.66e-15 | 49 |
regional part of brain | 6.74e-15 | 46 |
brain | 9.89e-15 | 47 |
future brain | 9.89e-15 | 47 |
structure with developmental contribution from neural crest | 7.31e-14 | 92 |
anterior neural tube | 1.27e-13 | 40 |
regional part of forebrain | 4.20e-13 | 39 |
forebrain | 4.20e-13 | 39 |
future forebrain | 4.20e-13 | 39 |
gray matter | 1.45e-12 | 34 |
brain grey matter | 1.25e-09 | 29 |
regional part of telencephalon | 1.25e-09 | 29 |
telencephalon | 1.25e-09 | 29 |
cerebral cortex | 8.91e-07 | 21 |
cerebral hemisphere | 8.91e-07 | 21 |
pallium | 8.91e-07 | 21 |