FFCP PHASE1:Mm9::chr3:95032232..95032290,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57912 | |EntrezGene=57912 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHL7 | |UniProt=Q8BHL7 | ||
|association_with_transcript=-363bp_to_ENSMUST00000053872_5end | |association_with_transcript=-363bp_to_ENSMUST00000053872_5end | ||
|cluster_id=chr3:95032232..95032290,+ | |||
|description=CAGE_peak_2_at_Cdc42se1_5end | |description=CAGE_peak_2_at_Cdc42se1_5end | ||
|id=chr3:95032232..95032290,+ | |id=chr3:95032232..95032290,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.98e-10!44;CL:0000133!3.98e-10!44;CL:0002319!9.17e-10!43;CL:0000540!1.24e-09!33;CL:0000047!1.24e-09!33;CL:0000031!1.24e-09!33;CL:0000404!1.24e-09!33;CL:0000034!3.65e-09!97;CL:0000055!7.30e-09!50;CL:0000393!2.28e-08!39;CL:0000211!2.28e-08!39;CL:0000838!7.21e-08!12;CL:0000542!1.46e-07!13;CL:0000051!1.46e-07!13;CL:0000084!2.89e-07!11;CL:0000827!2.89e-07!11;CL:0000791!8.31e-07!9;CL:0000789!8.31e-07!9;CL:0002420!8.31e-07!9;CL:0002419!8.31e-07!9;CL:0000790!8.31e-07!9;CL:0000723!8.53e-07!91;CL:0000048!8.53e-07!91 | |ontology_enrichment_celltype=CL:0000221!3.98e-10!44;CL:0000133!3.98e-10!44;CL:0002319!9.17e-10!43;CL:0000540!1.24e-09!33;CL:0000047!1.24e-09!33;CL:0000031!1.24e-09!33;CL:0000404!1.24e-09!33;CL:0000034!3.65e-09!97;CL:0000055!7.30e-09!50;CL:0000393!2.28e-08!39;CL:0000211!2.28e-08!39;CL:0000838!7.21e-08!12;CL:0000542!1.46e-07!13;CL:0000051!1.46e-07!13;CL:0000084!2.89e-07!11;CL:0000827!2.89e-07!11;CL:0000791!8.31e-07!9;CL:0000789!8.31e-07!9;CL:0002420!8.31e-07!9;CL:0002419!8.31e-07!9;CL:0000790!8.31e-07!9;CL:0000723!8.53e-07!91;CL:0000048!8.53e-07!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.37e-11,97;CL:0000221,8.84e-11,44;CL:0000133,8.84e-11,44;CL:0000540,1.13e-10,33;CL:0000047,1.13e-10,33;CL:0000031,1.13e-10,33;CL:0000404,1.13e-10,33;CL:0002319,2.20e-10,43;CL:0000393,6.82e-09,39;CL:0000211,6.82e-09,39;CL:0000723,9.16e-09,91;CL:0000048,9.16e-09,91;CL:0000838,1.82e-08,12;CL:0000542,3.94e-08,13;CL:0000051,3.94e-08,13;CL:0000084,8.28e-08,11;CL:0000827,8.28e-08,11;CL:0000791,2.63e-07,9;CL:0000789,2.63e-07,9;CL:0002420,2.63e-07,9;CL:0002419,2.63e-07,9;CL:0000790,2.63e-07,9;CL:0000738,3.37e-07,17;CL:0002087,3.37e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.45e-08!75;UBERON:0001016!3.45e-08!75;UBERON:0001017!1.81e-07!73;UBERON:0005743!1.81e-07!73;UBERON:0000153!5.90e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.46e-08,75;UBERON:0001017,1.43e-07,73;UBERON:0004121,1.87e-07,95;UBERON:0000924,1.87e-07,95;UBERON:0006601,1.87e-07,95;UBERON:0000010,8.14e-07,11 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.233612640595526,5.4231795845462,37.7313775366467,44.2381954748568,8.38968044304974,11.1681022593471,2.39681021903688,4.19617931611188,0,0.607425802169478,0.699561878128147,3.94327706697797,1.91960207048034,1.69755860719212,0.935476191661768,3.27660138962921,2.08959831311148,0,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0.665191531965914,6.98533740805594,3.69038872550742,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0.881277725829041,0.506884656097573,1.10128051297009,3.12956537739216,0.872100625521786,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,5.70460860596304,6.5282592781021,12.4354705682712,1.54355661621568,1.43266719969378,1.03134418455488,4.85559506063035,6.34789175126439,3.80298842103708,1.35537812827653,1.77858959222228,1.3498495759221,0,0,2.39680088414724,2.30530983192933,4.87341177849845,5.53524347159932,4.83747411108179,2.85650984403804,3.09215957332259,4.77714116938321,7.66763768145891,5.51531271966013,0,0.383062014255563,0.768032666281217,4.74790635828698,4.29991924931325,2.08365348222704,0,1.12552522006336,1.22238598221448,2.35702868378934,2.84743361598206,3.91438836233131,5.90664307998836,2.72057616384428,1.73918693221007,1.72084775396277,1.3599426674155,0,0,0,0.702222100658759,0.170430322578058,1.29893002301434,0,2.95771181531029,0,0,0,0.216491041011214,0,2.02209778005913,0.22836775943812,2.33044095282455,0.445326417194474,1.21439728736295,0.304465478312141,0.922461989024234,0.904335843315735,1.29347577849275,0.125666591329675,0.741584903203122,0.578397427679647,0,1.13236794963186,0.662524555381181,0.969750506270444,0,0,0.83778682725382,0,5.99075622529601,2.39961092397363,2.54140454146129,0.449371918214468,1.37250180845588,3.01570445070875,1.04294592115366,0.511430914660661,0,0.486723789203273,1.2220723662038,0.373220911830279,0.758168275301024,0.420883711772948,4.55421550369463,1.83921683546778,3.06105620669094,2.26057226753573,2.51735046859913,2.17793324484245,2.34254311399322,0.517406741478031,1.07783996466421,1.70195472151037,1.75951124163949,2.84954452155847,1.66828349535359,2.43776516565517,1.23469281844766,2.38841120182192,0.702213187313235,0.772043721344145,0.568326998791185,2.07125772535502,2.11073453982987,1.2604344302271,0.946978942340841,1.37734962223183,1.23413690309903,0.697601834251224,0.536546802799238,0.934122738937356,1.6455984991348,0.820837320395476,0.324275238183423,0.292399974850665,0,0,1.68231958851302,3.39585220851639,0,0,1.2797295032114,1.16118335930219,1.54640953586512,1.00841762311671,1.55664630691409,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.974820435595601,0,0.216138049874694,0.199141273254367,2.27601481143698,1.48523066392647,1.1270773567308,1.4255592949172,0.775809948670503,1.05203729835478,0.822074982615345,0.442830443938806,0.470996183524124,0.616985819609003,0,1.33476084572875,0.786235980452812,0.224862112384854,0.405720242777006,0,1.2731292589071,0.287696137450811,0,0.274561413188081,0,1.11642284300551,0,0,0,0,1.10851914099963,1.13694847062291,1.46668478797823,1.35796068620151,0.938760993154008,1.50755631697634,0.714130922658041,0.585400943573396,0.788175720530955,1.10732344824387,0.637819074629948,0.163863314715738,0.518054945597687,0.144649058581512,0,1.08781136763742,0,0,0.963303539926752,0.937693492737625,0.983609672260053,0,4.73262329124385,3.12350995437311,5.38558494331997,1.91175038362042,5.56996685205985,2.54768877709949,4.45291771842384,5.84511715822624,3.95287777946523,0,0.851640511249612,1.42452482933804,0.651547837414304,1.48473110675282,0,0.728341908464944,2.11626489875326,0.188605079755898,0.885905678642318,0.922305443831782,1.03371317267288,1.45413491791002,0.356497378384721,0.632073515871632,0,0,1.02131881726136,2.34079422240703,2.45781499187234,1.92903331528433,2.30542303734956,2.31879462882692,2.30368628842969,3.65357938937519,2.3467170806371,1.90648863777438,0,0.32977250588296,0.968786560175433,1.5078231232039,1.19372344003136,1.14898629821543,0.582961673259701,0.18542530201051,1.19609616558497,1.857481811669,1.11116716421827,0.565105371014073,0.546776910884101,0.915112692826091,7.47905091972963,8.6769900440668,6.77179871641677,0,3.16335993581135,1.42323626988794,0.648032044930808,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.26175594198403,0.129614973291793,0,5.07323644815771,2.24274819065968,2.97825282822776,1.94451188344048,2.58319646955462,1.520605129417,1.29092962510329,4.29674469985035,4.40409246587986,0.966336483304024,3.16833006883652,2.52808896502543,2.22997736819181,2.15693010046137,1.16928740680016,2.32734704367726,1.19208812868759,2.04332264183947,2.36303243479324,1.11063094942962,1.752756553065,1.91569751759997,2.63136277997332,2.30908419936791,3.03879945672079,0.226730383615211,3.32978930061097,5.29311753995907,5.37230772365051,0.19318959403219,0.563047426353546,0.915758121336325,0.857473516316263,0,1.12950368523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| |phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.233612640595526,5.4231795845462,37.7313775366467,44.2381954748568,8.38968044304974,11.1681022593471,2.39681021903688,4.19617931611188,0,0.607425802169478,0.699561878128147,3.94327706697797,1.91960207048034,1.69755860719212,0.935476191661768,3.27660138962921,2.08959831311148,0,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0.665191531965914,6.98533740805594,3.69038872550742,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0.881277725829041,0.506884656097573,1.10128051297009,3.12956537739216,0.872100625521786,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,5.70460860596304,6.5282592781021,12.4354705682712,1.54355661621568,1.43266719969378,1.03134418455488,4.85559506063035,6.34789175126439,3.80298842103708,1.35537812827653,1.77858959222228,1.3498495759221,0,0,2.39680088414724,2.30530983192933,4.87341177849845,5.53524347159932,4.83747411108179,2.85650984403804,3.09215957332259,4.77714116938321,7.66763768145891,5.51531271966013,0,0.383062014255563,0.768032666281217,4.74790635828698,4.29991924931325,2.08365348222704,0,1.12552522006336,1.22238598221448,2.35702868378934,2.84743361598206,3.91438836233131,5.90664307998836,2.72057616384428,1.73918693221007,1.72084775396277,1.3599426674155,0,0,0,0.702222100658759,0.170430322578058,1.29893002301434,0,2.95771181531029,0,0,0,0.216491041011214,0,2.02209778005913,0.22836775943812,2.33044095282455,0.445326417194474,1.21439728736295,0.304465478312141,0.922461989024234,0.904335843315735,1.29347577849275,0.125666591329675,0.741584903203122,0.578397427679647,0,1.13236794963186,0.662524555381181,0.969750506270444,0,0,0.83778682725382,0,5.99075622529601,2.39961092397363,2.54140454146129,0.449371918214468,1.37250180845588,3.01570445070875,1.04294592115366,0.511430914660661,0,0.486723789203273,1.2220723662038,0.373220911830279,0.758168275301024,0.420883711772948,4.55421550369463,1.83921683546778,3.06105620669094,2.26057226753573,2.51735046859913,2.17793324484245,2.34254311399322,0.517406741478031,1.07783996466421,1.70195472151037,1.75951124163949,2.84954452155847,1.66828349535359,2.43776516565517,1.23469281844766,2.38841120182192,0.702213187313235,0.772043721344145,0.568326998791185,2.07125772535502,2.11073453982987,1.2604344302271,0.946978942340841,1.37734962223183,1.23413690309903,0.697601834251224,0.536546802799238,0.934122738937356,1.6455984991348,0.820837320395476,0.324275238183423,0.292399974850665,0,0,1.68231958851302,3.39585220851639,0,0,1.2797295032114,1.16118335930219,1.54640953586512,1.00841762311671,1.55664630691409,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.974820435595601,0,0.216138049874694,0.199141273254367,2.27601481143698,1.48523066392647,1.1270773567308,1.4255592949172,0.775809948670503,1.05203729835478,0.822074982615345,0.442830443938806,0.470996183524124,0.616985819609003,0,1.33476084572875,0.786235980452812,0.224862112384854,0.405720242777006,0,1.2731292589071,0.287696137450811,0,0.274561413188081,0,1.11642284300551,0,0,0,0,1.10851914099963,1.13694847062291,1.46668478797823,1.35796068620151,0.938760993154008,1.50755631697634,0.714130922658041,0.585400943573396,0.788175720530955,1.10732344824387,0.637819074629948,0.163863314715738,0.518054945597687,0.144649058581512,0,1.08781136763742,0,0,0.963303539926752,0.937693492737625,0.983609672260053,0,4.73262329124385,3.12350995437311,5.38558494331997,1.91175038362042,5.56996685205985,2.54768877709949,4.45291771842384,5.84511715822624,3.95287777946523,0,0.851640511249612,1.42452482933804,0.651547837414304,1.48473110675282,0,0.728341908464944,2.11626489875326,0.188605079755898,0.885905678642318,0.922305443831782,1.03371317267288,1.45413491791002,0.356497378384721,0.632073515871632,0,0,1.02131881726136,2.34079422240703,2.45781499187234,1.92903331528433,2.30542303734956,2.31879462882692,2.30368628842969,3.65357938937519,2.3467170806371,1.90648863777438,0,0.32977250588296,0.968786560175433,1.5078231232039,1.19372344003136,1.14898629821543,0.582961673259701,0.18542530201051,1.19609616558497,1.857481811669,1.11116716421827,0.565105371014073,0.546776910884101,0.915112692826091,7.47905091972963,8.6769900440668,6.77179871641677,0,3.16335993581135,1.42323626988794,0.648032044930808,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.26175594198403,0.129614973291793,0,5.07323644815771,2.24274819065968,2.97825282822776,1.94451188344048,2.58319646955462,1.520605129417,1.29092962510329,4.29674469985035,4.40409246587986,0.966336483304024,3.16833006883652,2.52808896502543,2.22997736819181,2.15693010046137,1.16928740680016,2.32734704367726,1.19208812868759,2.04332264183947,2.36303243479324,1.11063094942962,1.752756553065,1.91569751759997,2.63136277997332,2.30908419936791,3.03879945672079,0.226730383615211,3.32978930061097,5.29311753995907,5.37230772365051,0.19318959403219,0.563047426353546,0.915758121336325,0.857473516316263,0,1.12950368523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| ||
|short_description=p2@Cdc42se1 | |short_description=p2@Cdc42se1 | ||
}} | }} |
Latest revision as of 23:06, 25 September 2015
Short description: | p2@Cdc42se1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdc42se1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -363bp_to_ENSMUST00000053872_5end |
EntrezGene: | Cdc42se1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.37e-11 | 97 |
ectodermal cell | 8.84e-11 | 44 |
neurectodermal cell | 8.84e-11 | 44 |
neuron | 1.13e-10 | 33 |
neuronal stem cell | 1.13e-10 | 33 |
neuroblast | 1.13e-10 | 33 |
electrically signaling cell | 1.13e-10 | 33 |
neural cell | 2.20e-10 | 43 |
electrically responsive cell | 6.82e-09 | 39 |
electrically active cell | 6.82e-09 | 39 |
somatic stem cell | 9.16e-09 | 91 |
multi fate stem cell | 9.16e-09 | 91 |
lymphoid lineage restricted progenitor cell | 1.82e-08 | 12 |
lymphocyte | 3.94e-08 | 13 |
common lymphoid progenitor | 3.94e-08 | 13 |
T cell | 8.28e-08 | 11 |
pro-T cell | 8.28e-08 | 11 |
mature alpha-beta T cell | 2.63e-07 | 9 |
alpha-beta T cell | 2.63e-07 | 9 |
immature T cell | 2.63e-07 | 9 |
mature T cell | 2.63e-07 | 9 |
immature alpha-beta T cell | 2.63e-07 | 9 |
leukocyte | 3.37e-07 | 17 |
nongranular leukocyte | 3.37e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.46e-08 | 75 |
central nervous system | 1.43e-07 | 73 |
ectoderm-derived structure | 1.87e-07 | 95 |
ectoderm | 1.87e-07 | 95 |
presumptive ectoderm | 1.87e-07 | 95 |
peripheral nervous system | 8.14e-07 | 11 |