FFCP PHASE1:Mm9::chr5:36071697..36071727,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:36071697..36071727,-
|short_description=p2@Sh3tc1
|description=CAGE_peak_2_at_Sh3tc1_5end
|association_with_transcript=-36bp_to_ENSMUST00000154118_5end
|E...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=231147 | |EntrezGene=231147 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=181 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENSMUST00000154118_5end | |||
|cluster_id=chr5:36071697..36071727,- | |||
|description=CAGE_peak_2_at_Sh3tc1_5end | |||
|id=chr5:36071697..36071727,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.00e-14!193;UBERON:0004120!1.00e-14!193;UBERON:0006603!1.00e-14!193;UBERON:0009569!3.69e-11!66;UBERON:0005177!7.59e-10!85;UBERON:0002100!4.97e-08!98;UBERON:0005172!5.64e-08!49;UBERON:0005173!5.64e-08!49;UBERON:0002417!5.64e-08!49;UBERON:0000916!5.64e-08!49;UBERON:0000466!2.73e-07!79;UBERON:0002048!6.79e-07!14;UBERON:0000117!6.79e-07!14;UBERON:0000171!6.79e-07!14;UBERON:0000170!6.79e-07!14;UBERON:0005597!6.79e-07!14;UBERON:0000118!6.79e-07!14;UBERON:0004872!8.92e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.75e-13,79;UBERON:0009569,5.87e-12,66;UBERON:0002100,5.25e-11,90;UBERON:0005172,5.11e-08,49;UBERON:0005173,5.11e-08,49;UBERON:0002417,5.11e-08,49;UBERON:0000916,5.11e-08,49;UBERON:0002048,2.54e-07,14;UBERON:0000117,2.54e-07,14;UBERON:0000171,2.54e-07,14;UBERON:0000170,2.54e-07,14;UBERON:0005597,2.54e-07,14;UBERON:0000118,2.54e-07,14;UBERON:0004872,4.50e-07,33;UBERON:0005153,5.99e-07,17 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0.513602189793617,0,1.99865857089398,1.61980213911861,0.699561878128147,4.57420139769445,6.58149281307546,3.39511721438424,2.63634199468316,3.57447424323187,1.56719873483361,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20769587621197,7.813353445238,9.42342739152837,8.2352408324342,4.78131839470912,10.1957174136542,0.629484089877886,0.709638518536602,0.183546752161682,0,0,0,0,0,0,5.20126078778983,0,1.68046899571232,0.514518872071894,0,0,0.202316460859598,0,0,0,0,8.54904731417329,11.8663963508037,17.7620028736525,3.89480143673926,2.68952813725088,0.207379224616955,0.540023753326763,0.210324961351382,0.571301968807607,1.10434270475807,0.244981598429908,0.191690942036473,0,0,0.255374676170375,1.0752457327937,0.263772575460388,0.914876436024097,0,0.558365998002762,0.56276261003168,0.61119299110724,0,0.284743361598206,0.931997229126503,0.151452386666368,0,26.6675329605544,6.88339101585109,0,1.07940638327563,1.94932925234301,0.448026887097336,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,2.16949371466214,7.25026074212081,3.56261133755579,1.56136794089522,2.43572382649713,1.61430848079241,1.95939432718409,3.41007250693544,2.26199864393416,1.48316980640624,5.63937491987655,1.76922110389975,2.10296904931632,2.20841518460394,2.42437626567611,0,0.292780797011547,0.209446706813455,0.510914110417183,2.39630249011841,1.79970819298022,3.55796635804581,0.748953197024114,1.37250180845588,0.125654352112864,0.695297280769106,1.27857728665165,0.41557608911912,1.1356888414743,3.05518091550949,2.11491850037158,2.0217820674694,0.631325567659422,0.390361328888111,0.919608417733892,0.720248519221397,1.65775299619287,0.476255494059295,0.512454881139399,0.749613796477831,0.258703370739016,0.431135985865684,0.945530400839096,0.175951124163949,0.43839146485515,0.834141747676794,1.74126083261083,1.23469281844766,1.59227413454795,3.51106593656617,2.57347907114715,3.12579849335152,3.10688658803253,3.51789089971644,2.88099298337624,2.60419209143731,3.73852040320067,4.01094493507183,3.0229412817553,3.21928081679543,4.32031766758527,4.27855609775049,4.43252153013557,4.78305976320549,3.94739966048397,5.04965265169416,5.63666958793561,0.420579897128254,0.205809224758569,1.32167513193519,0.264450566663544,1.70630600428187,1.85789337488351,0.902072229254653,1.21010114774006,1.77902435075896,1.33157938278791,0.474529061544512,0.988193728344065,1.75934646160189,1.98956472041151,0.974820435595601,1.79763881730844,0.648414149624083,1.1948476395262,1.32767530667157,2.39921876480431,4.50830942692322,1.83286195060783,0.969762435838129,3.99774173374816,6.45012678667424,7.0852871030209,4.86696056308262,4.81248939295022,2.37162101669719,0.83422552858047,1.37591296579242,1.79889689907883,0.811440485554012,2.65294875727659,2.5462585178142,2.01387296215567,3.40483976227574,4.11842119782122,1.43768206527355,6.32639611036456,3.43241440426017,2.52578877947112,1.4351793081753,4.3419916922703,10.1614254591633,2.08440552947533,1.14075483509418,1.35796068620151,3.05097322775053,3.68513766371995,6.66522194480839,9.17128144931655,12.1379060961767,11.9590932410338,7.97273843287435,12.4536119183961,10.7064688756855,14.0309586824066,12.0633027151418,10.3342079925555,3.44234991113325,2.48343071674259,0.481651769963376,0.586058432961016,0,2.7771801992481,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,2.41298144854057,2.31485284767432,1.62886959353576,1.81467135269789,0,1.45668381692989,0,1.88605079755898,2.95301892880773,1.84461088766356,2.58428293168221,3.99887102425256,3.20847640546249,4.74055136903724,1.05418608574999,2.06271086496374,2.7235168460303,1.62054984628179,1.68166288917581,1.28602221018955,3.01478397191865,0.535106452806212,1.15184314421485,0.913394847343798,1.40803024838226,4.02480934641258,0.220528398054962,2.80306630000516,2.9063596805263,2.11095237248546,1.55184047204077,1.14898629821543,2.04036585640896,0.927126510052548,3.07567585436135,4.33412422722767,2.77791791054568,2.26042148405629,2.87057878214153,3.43167259809784,1.5298058699447,1.53946597556024,3.04039942369732,0,0.790839983952838,1.01659733563424,1.40406943068342,0.836353184057875,0.436725127492355,1.21377911746339,1.98368293740806,1.04702376793612,1.03691978633434,3.72803587852155,0.56369293868419,2.0932316446157,1.32366792365678,2.33341426012857,1.29159823477731,0.675824501963113,1.5256441023948,2.21347454234715,1.25831213310853,0.241584120826006,0.576060012515731,0.948033361884535,2.02725215290164,0.616265742988964,1.16928740680016,0.537080087002444,0.596044064343795,1.08175904567972,0.295379054349154,0.504832249740738,0.685861259894999,0.604957110821043,0.292373642219257,0.384847366561318,0.584384510907845,1.36038230169127,0,0,0,1.35232715822533,2.25218970541418,2.56412273974171,1.07184189539533,0,1.6942555278512,0.920650473014354,1.14579102687879,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.31136204275253,1.19707462020309,2.39027048055788,0.972426868273176,0.628839487883947,1.65459157605013,1.77797382241292,1.44224540067226,2.56735367673452,3.03236654116557,1.01391719956096,0.754505365544305,0.936415074698824,1.40855335290712,1.32101578597911,1.42888107384922,1.50649623728312,1.35036454324594,1.64834360321323,1.32479028120958,1.37147700954166,1.95223386775271,2.38436189947321,1.74415699958794,1.2234219453993,1.77690676572521,2.19513567447327,1.8414879800649,1.90125759384206,1.68342681497322,2.60997039873183,2.1670986122624,0.818462086339379,1.08455788830176,1.73615949883027,0.999242311751784,1.87145286756327,4.08255002691767,2.29545998482612,3.75005412503176,3.70988536992674 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0.513602189793617,0,1.99865857089398,1.61980213911861,0.699561878128147,4.57420139769445,6.58149281307546,3.39511721438424,2.63634199468316,3.57447424323187,1.56719873483361,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20769587621197,7.813353445238,9.42342739152837,8.2352408324342,4.78131839470912,10.1957174136542,0.629484089877886,0.709638518536602,0.183546752161682,0,0,0,0,0,0,5.20126078778983,0,1.68046899571232,0.514518872071894,0,0,0.202316460859598,0,0,0,0,8.54904731417329,11.8663963508037,17.7620028736525,3.89480143673926,2.68952813725088,0.207379224616955,0.540023753326763,0.210324961351382,0.571301968807607,1.10434270475807,0.244981598429908,0.191690942036473,0,0,0.255374676170375,1.0752457327937,0.263772575460388,0.914876436024097,0,0.558365998002762,0.56276261003168,0.61119299110724,0,0.284743361598206,0.931997229126503,0.151452386666368,0,26.6675329605544,6.88339101585109,0,1.07940638327563,1.94932925234301,0.448026887097336,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,2.16949371466214,7.25026074212081,3.56261133755579,1.56136794089522,2.43572382649713,1.61430848079241,1.95939432718409,3.41007250693544,2.26199864393416,1.48316980640624,5.63937491987655,1.76922110389975,2.10296904931632,2.20841518460394,2.42437626567611,0,0.292780797011547,0.209446706813455,0.510914110417183,2.39630249011841,1.79970819298022,3.55796635804581,0.748953197024114,1.37250180845588,0.125654352112864,0.695297280769106,1.27857728665165,0.41557608911912,1.1356888414743,3.05518091550949,2.11491850037158,2.0217820674694,0.631325567659422,0.390361328888111,0.919608417733892,0.720248519221397,1.65775299619287,0.476255494059295,0.512454881139399,0.749613796477831,0.258703370739016,0.431135985865684,0.945530400839096,0.175951124163949,0.43839146485515,0.834141747676794,1.74126083261083,1.23469281844766,1.59227413454795,3.51106593656617,2.57347907114715,3.12579849335152,3.10688658803253,3.51789089971644,2.88099298337624,2.60419209143731,3.73852040320067,4.01094493507183,3.0229412817553,3.21928081679543,4.32031766758527,4.27855609775049,4.43252153013557,4.78305976320549,3.94739966048397,5.04965265169416,5.63666958793561,0.420579897128254,0.205809224758569,1.32167513193519,0.264450566663544,1.70630600428187,1.85789337488351,0.902072229254653,1.21010114774006,1.77902435075896,1.33157938278791,0.474529061544512,0.988193728344065,1.75934646160189,1.98956472041151,0.974820435595601,1.79763881730844,0.648414149624083,1.1948476395262,1.32767530667157,2.39921876480431,4.50830942692322,1.83286195060783,0.969762435838129,3.99774173374816,6.45012678667424,7.0852871030209,4.86696056308262,4.81248939295022,2.37162101669719,0.83422552858047,1.37591296579242,1.79889689907883,0.811440485554012,2.65294875727659,2.5462585178142,2.01387296215567,3.40483976227574,4.11842119782122,1.43768206527355,6.32639611036456,3.43241440426017,2.52578877947112,1.4351793081753,4.3419916922703,10.1614254591633,2.08440552947533,1.14075483509418,1.35796068620151,3.05097322775053,3.68513766371995,6.66522194480839,9.17128144931655,12.1379060961767,11.9590932410338,7.97273843287435,12.4536119183961,10.7064688756855,14.0309586824066,12.0633027151418,10.3342079925555,3.44234991113325,2.48343071674259,0.481651769963376,0.586058432961016,0,2.7771801992481,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,2.41298144854057,2.31485284767432,1.62886959353576,1.81467135269789,0,1.45668381692989,0,1.88605079755898,2.95301892880773,1.84461088766356,2.58428293168221,3.99887102425256,3.20847640546249,4.74055136903724,1.05418608574999,2.06271086496374,2.7235168460303,1.62054984628179,1.68166288917581,1.28602221018955,3.01478397191865,0.535106452806212,1.15184314421485,0.913394847343798,1.40803024838226,4.02480934641258,0.220528398054962,2.80306630000516,2.9063596805263,2.11095237248546,1.55184047204077,1.14898629821543,2.04036585640896,0.927126510052548,3.07567585436135,4.33412422722767,2.77791791054568,2.26042148405629,2.87057878214153,3.43167259809784,1.5298058699447,1.53946597556024,3.04039942369732,0,0.790839983952838,1.01659733563424,1.40406943068342,0.836353184057875,0.436725127492355,1.21377911746339,1.98368293740806,1.04702376793612,1.03691978633434,3.72803587852155,0.56369293868419,2.0932316446157,1.32366792365678,2.33341426012857,1.29159823477731,0.675824501963113,1.5256441023948,2.21347454234715,1.25831213310853,0.241584120826006,0.576060012515731,0.948033361884535,2.02725215290164,0.616265742988964,1.16928740680016,0.537080087002444,0.596044064343795,1.08175904567972,0.295379054349154,0.504832249740738,0.685861259894999,0.604957110821043,0.292373642219257,0.384847366561318,0.584384510907845,1.36038230169127,0,0,0,1.35232715822533,2.25218970541418,2.56412273974171,1.07184189539533,0,1.6942555278512,0.920650473014354,1.14579102687879,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.31136204275253,1.19707462020309,2.39027048055788,0.972426868273176,0.628839487883947,1.65459157605013,1.77797382241292,1.44224540067226,2.56735367673452,3.03236654116557,1.01391719956096,0.754505365544305,0.936415074698824,1.40855335290712,1.32101578597911,1.42888107384922,1.50649623728312,1.35036454324594,1.64834360321323,1.32479028120958,1.37147700954166,1.95223386775271,2.38436189947321,1.74415699958794,1.2234219453993,1.77690676572521,2.19513567447327,1.8414879800649,1.90125759384206,1.68342681497322,2.60997039873183,2.1670986122624,0.818462086339379,1.08455788830176,1.73615949883027,0.999242311751784,1.87145286756327,4.08255002691767,2.29545998482612,3.75005412503176,3.70988536992674 | ||
|short_description=p2@Sh3tc1 | |||
}} | }} |
Latest revision as of 23:59, 25 September 2015
Short description: | p2@Sh3tc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh3tc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:181 |
Association with transcript: | -36bp_to_ENSMUST00000154118_5end |
EntrezGene: | Sh3tc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.75e-13 | 79 |
subdivision of trunk | 5.87e-12 | 66 |
trunk | 5.25e-11 | 90 |
abdomen element | 5.11e-08 | 49 |
abdominal segment element | 5.11e-08 | 49 |
abdominal segment of trunk | 5.11e-08 | 49 |
abdomen | 5.11e-08 | 49 |
lung | 2.54e-07 | 14 |
respiratory tube | 2.54e-07 | 14 |
respiration organ | 2.54e-07 | 14 |
pair of lungs | 2.54e-07 | 14 |
lung primordium | 2.54e-07 | 14 |
lung bud | 2.54e-07 | 14 |
splanchnic layer of lateral plate mesoderm | 4.50e-07 | 33 |
epithelial bud | 5.99e-07 | 17 |