FFCP PHASE1:Mm9::chr5:38611639..38611698,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75079 | |EntrezGene=75079 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8WHI5,Q8BXX2,E9Q2Y5,D6RGS0,D6RFB4,D6RE57,Q8BLJ1 | |UniProt=F8WHI5,Q8BXX2,E9Q2Y5,D6RGS0,D6RFB4,D6RE57,Q8BLJ1 | ||
|association_with_transcript=0bp_to_ENSMUST00000075525,ENSMUST00000094833,ENSMUST00000114113,ENSMUST00000114114,ENSMUST00000123106,ENSMUST00000126267,ENSMUST00000136475,ENSMUST00000137577,ENSMUST00000138820,NM_029162,uc008xgc.1,uc008xgd.1,uc008xge.1,uc008xgf.1_5end | |association_with_transcript=0bp_to_ENSMUST00000075525,ENSMUST00000094833,ENSMUST00000114113,ENSMUST00000114114,ENSMUST00000123106,ENSMUST00000126267,ENSMUST00000136475,ENSMUST00000137577,ENSMUST00000138820,NM_029162,uc008xgc.1,uc008xgd.1,uc008xge.1,uc008xgf.1_5end | ||
|cluster_id=chr5:38611639..38611698,- | |||
|description=CAGE_peak_1_at_Zbtb49_5end | |description=CAGE_peak_1_at_Zbtb49_5end | ||
|id=chr5:38611639..38611698,- | |id=chr5:38611639..38611698,- | ||
Latest revision as of 00:36, 26 September 2015
| Short description: | p1@Zbtb49 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Zbtb49_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000075525, ENSMUST00000094833, ENSMUST00000114113, ENSMUST00000114114, ENSMUST00000123106, ENSMUST00000126267, ENSMUST00000136475, ENSMUST00000137577, ENSMUST00000138820, NM_029162, uc008xgc.1, uc008xgd.1, uc008xge.1, uc008xgf.1_5end |
| EntrezGene: | Zbtb49 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.53e-09 | 23 |
| neuroblast (sensu Vertebrata) | 2.53e-09 | 23 |
| neuron | 6.29e-07 | 33 |
| neuronal stem cell | 6.29e-07 | 33 |
| neuroblast | 6.29e-07 | 33 |
| electrically signaling cell | 6.29e-07 | 33 |
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 5.80e-10 | 64 |
| neural plate | 5.80e-10 | 64 |
| presumptive neural plate | 5.80e-10 | 64 |
| regional part of nervous system | 7.32e-10 | 54 |
| ecto-epithelium | 1.43e-09 | 73 |
| pre-chordal neural plate | 1.59e-09 | 49 |
| neural tube | 3.78e-09 | 52 |
| neural rod | 3.78e-09 | 52 |
| future spinal cord | 3.78e-09 | 52 |
| neural keel | 3.78e-09 | 52 |
| gray matter | 4.94e-09 | 34 |
| brain | 1.30e-08 | 47 |
| future brain | 1.30e-08 | 47 |
| anterior neural tube | 2.47e-08 | 40 |
| central nervous system | 2.80e-08 | 73 |
| regional part of brain | 4.25e-08 | 46 |
| regional part of forebrain | 5.45e-08 | 39 |
| forebrain | 5.45e-08 | 39 |
| future forebrain | 5.45e-08 | 39 |
| ectoderm-derived structure | 7.41e-08 | 95 |
| ectoderm | 7.41e-08 | 95 |
| presumptive ectoderm | 7.41e-08 | 95 |
| brain grey matter | 8.71e-08 | 29 |
| regional part of telencephalon | 8.71e-08 | 29 |
| telencephalon | 8.71e-08 | 29 |
| nervous system | 1.47e-07 | 75 |
