FFCP PHASE1:Mm9::chr8:97190600..97190611,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:97190600..97190611,+
|short_description=p5@Arl2bp
|description=CAGE_peak_5_at_Arl2bp_5end
|association_with_transcript=-43bp_to_NM_024191,uc009mwt.1_5end
...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107566 | |EntrezGene=107566 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9D385 | |UniProt=Q9D385 | ||
|association_with_transcript=-43bp_to_NM_024191,uc009mwt.1_5end | |||
|cluster_id=chr8:97190600..97190611,+ | |||
|description=CAGE_peak_5_at_Arl2bp_5end | |||
|id=chr8:97190600..97190611,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.06e-13!44;CL:0000133!1.06e-13!44;CL:0002319!1.40e-13!43;CL:0000055!3.84e-11!50;CL:0000540!1.06e-09!33;CL:0000047!1.06e-09!33;CL:0000031!1.06e-09!33;CL:0000404!1.06e-09!33;CL:0000393!2.53e-08!39;CL:0000211!2.53e-08!39;CL:0000117!1.50e-07!23;CL:0000337!1.50e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.29e-14,44;CL:0000133,2.29e-14,44;CL:0002319,3.07e-14,43;CL:0000540,3.31e-10,33;CL:0000047,3.31e-10,33;CL:0000031,3.31e-10,33;CL:0000404,3.31e-10,33;CL:0000393,5.72e-09,39;CL:0000211,5.72e-09,39;CL:0000117,5.51e-08,23;CL:0000337,5.51e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.68e-15!75;UBERON:0001016!3.68e-15!75;UBERON:0001017!1.14e-14!73;UBERON:0005743!1.14e-14!73;UBERON:0004121!7.14e-12!102;UBERON:0000924!7.14e-12!102;UBERON:0006601!7.14e-12!102;UBERON:0002346!8.15e-11!71;UBERON:0003075!8.15e-11!71;UBERON:0007284!8.15e-11!71;UBERON:0001049!2.67e-10!52;UBERON:0005068!2.67e-10!52;UBERON:0006241!2.67e-10!52;UBERON:0007135!2.67e-10!52;UBERON:0002020!3.32e-08!34;UBERON:0000033!4.02e-08!63;UBERON:0003056!6.49e-08!49;UBERON:0002616!2.42e-07!49;UBERON:0000955!4.89e-07!50;UBERON:0006238!4.89e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.10e-15,92;UBERON:0001016,4.71e-15,75;UBERON:0001017,1.50e-14,73;UBERON:0004121,4.54e-13,95;UBERON:0000924,4.54e-13,95;UBERON:0006601,4.54e-13,95;UBERON:0002346,1.08e-12,64;UBERON:0003075,1.08e-12,64;UBERON:0007284,1.08e-12,64;UBERON:0010371,2.03e-10,73;UBERON:0001049,4.12e-10,52;UBERON:0005068,4.12e-10,52;UBERON:0006241,4.12e-10,52;UBERON:0007135,4.12e-10,52;UBERON:0000073,1.77e-09,54;UBERON:0002020,5.29e-08,34;UBERON:0003056,1.06e-07,49;UBERON:0002616,1.52e-07,46;UBERON:0000955,5.04e-07,47;UBERON:0006238,5.04e-07,47 | |||
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| ||
|short_description=p5@Arl2bp | |||
}} | }} |
Latest revision as of 00:39, 26 September 2015
Short description: | p5@Arl2bp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Arl2bp_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_NM_024191, uc009mwt.1_5end |
EntrezGene: | Arl2bp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.29e-14 | 44 |
neurectodermal cell | 2.29e-14 | 44 |
neural cell | 3.07e-14 | 43 |
neuron | 3.31e-10 | 33 |
neuronal stem cell | 3.31e-10 | 33 |
neuroblast | 3.31e-10 | 33 |
electrically signaling cell | 3.31e-10 | 33 |
electrically responsive cell | 5.72e-09 | 39 |
electrically active cell | 5.72e-09 | 39 |
CNS neuron (sensu Vertebrata) | 5.51e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.51e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.10e-15 | 92 |
nervous system | 4.71e-15 | 75 |
central nervous system | 1.50e-14 | 73 |
ectoderm-derived structure | 4.54e-13 | 95 |
ectoderm | 4.54e-13 | 95 |
presumptive ectoderm | 4.54e-13 | 95 |
neurectoderm | 1.08e-12 | 64 |
neural plate | 1.08e-12 | 64 |
presumptive neural plate | 1.08e-12 | 64 |
ecto-epithelium | 2.03e-10 | 73 |
neural tube | 4.12e-10 | 52 |
neural rod | 4.12e-10 | 52 |
future spinal cord | 4.12e-10 | 52 |
neural keel | 4.12e-10 | 52 |
regional part of nervous system | 1.77e-09 | 54 |
gray matter | 5.29e-08 | 34 |
pre-chordal neural plate | 1.06e-07 | 49 |
regional part of brain | 1.52e-07 | 46 |
brain | 5.04e-07 | 47 |
future brain | 5.04e-07 | 47 |