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FFCP PHASE1:Mm9::chr5:3927857..3927888,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=100986
|EntrezGene=100986
|HGNC=
|HGNC=
|MCL_coexpression_id=643
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-165bp_to_ENSMUST00000132058,uc008wib.1_5end
|association_with_transcript=-165bp_to_ENSMUST00000132058,uc008wib.1_5end
|cluster_id=chr5:3927857..3927888,+
|description=CAGE_peak_3_at_Akap9_5end
|description=CAGE_peak_3_at_Akap9_5end
|id=chr5:3927857..3927888,+
|id=chr5:3927857..3927888,+
|ontology_enrichment_celltype=CL:0000540!1.93e-07!33;CL:0000047!1.93e-07!33;CL:0000031!1.93e-07!33;CL:0000404!1.93e-07!33;CL:0000117!6.47e-07!23;CL:0000337!6.47e-07!23
|ontology_enrichment_celltype=CL:0000540!1.93e-07!33;CL:0000047!1.93e-07!33;CL:0000031!1.93e-07!33;CL:0000404!1.93e-07!33;CL:0000117!6.47e-07!23;CL:0000337!6.47e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.53e-08,23;CL:0000337,3.53e-08,23;CL:0002609,6.89e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!7.31e-10!49;UBERON:0002346!5.10e-09!71;UBERON:0003075!5.10e-09!71;UBERON:0007284!5.10e-09!71;UBERON:0001017!6.06e-08!73;UBERON:0005743!6.06e-08!73;UBERON:0004121!9.95e-08!102;UBERON:0000924!9.95e-08!102;UBERON:0006601!9.95e-08!102;UBERON:0000033!1.05e-07!63;UBERON:0001049!1.14e-07!52;UBERON:0005068!1.14e-07!52;UBERON:0006241!1.14e-07!52;UBERON:0007135!1.14e-07!52;UBERON:0000073!1.50e-07!75;UBERON:0001016!1.50e-07!75;UBERON:0003080!2.16e-07!40;UBERON:0002780!3.49e-07!39;UBERON:0001890!3.49e-07!39;UBERON:0006240!3.49e-07!39;UBERON:0002020!3.62e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.56e-13,49;UBERON:0002346,2.42e-11,64;UBERON:0003075,2.42e-11,64;UBERON:0007284,2.42e-11,64;UBERON:0003080,5.44e-10,40;UBERON:0002780,1.09e-09,39;UBERON:0001890,1.09e-09,39;UBERON:0006240,1.09e-09,39;UBERON:0002020,2.41e-09,34;UBERON:0010371,6.08e-09,73;UBERON:0001049,1.27e-08,52;UBERON:0005068,1.27e-08,52;UBERON:0006241,1.27e-08,52;UBERON:0007135,1.27e-08,52;UBERON:0000955,5.74e-08,47;UBERON:0006238,5.74e-08,47;UBERON:0000073,5.98e-08,54;UBERON:0003528,7.47e-08,29;UBERON:0002791,7.47e-08,29;UBERON:0001893,7.47e-08,29;UBERON:0001017,9.41e-08,73;UBERON:0004121,9.84e-08,95;UBERON:0000924,9.84e-08,95;UBERON:0006601,9.84e-08,95;UBERON:0002616,1.48e-07,46;UBERON:0001016,3.00e-07,75
|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,5.69790044012167,0.198581902401771,0,0.319984845586813,0,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,3.03474691289397,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0.384218305321555,5.80661828927475,3.24014251996058,4.41682418837902,1.14260393761521,0.883474163806454,5.02212276781312,3.83381884072945,2.75765635983006,0,0.510749352340751,0.46081959976873,2.76961204233407,2.01272815925301,4.16730696445408,0,0.56276261003168,1.06958773443767,2.94628585473668,2.98980529678116,1.86399445825301,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.823120949949934,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0.599902730993408,0.381210681219194,1.19832511523858,5.03250663100489,14.4502504929794,1.39059456153821,2.55715457330331,1.24672826735736,2.43361894601636,2.24046600470696,0.124406970610093,0.252722758433675,0.210441855886474,1.69156575851515,2.29902104433473,2.52086981727489,3.0140963567143,3.74200745332303,4.09963904911519,2.52994656311268,0.258703370739016,0.215567992932842,1.13463648100692,1.93546236580344,0.657587197282725,1.11218899690239,0.696504333044333,0,1.39323986772945,0,0.772043721344145,0,1.03562886267751,0.938104239924385,0.540186184383045,0.23674473558521,1.18058539048442,0.925602677324269,0.232533944750408,1.07309360559848,1.05088808130453,0.329119699826961,0.656669856316381,0.324275238183423,0.146199987425332,0,0.134206418760372,0.630869845692382,16.0531195311684,0,0,0.853153002140936,2.09013004674395,0.644337306610467,1.00841762311671,0.889512175379481,0.190225626112559,0,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0.432276099749388,0,0.189667900953082,1.5994791765362,0,0.814605311381257,0.775809948670503,1.61312385747733,0.758838445491087,0,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0,0,0.744281895337007,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,1.62964976442026,1.18821560042632,1.40814148973101,2.01007508930179,1.19021820443007,2.14647012643579,1.57635144106191,1.7717175171902,1.11618338060241,0.655453258862952,0.863424909329478,0.578596234326046,0,0,0,0,0.160550589987792,0.820481806145422,0,0.504941854408746,0.631016438832513,0.390438744296638,1.50796378412959,0.477937595905104,0.891194696329576,1.13230612315533,0.404810701674894,1.16902343164525,1.97643888973262,1.92792789853084,0.99358059645788,0.178065603667255,1.46598263418218,0.494910368917606,0,0.242780636154981,0.604647113929502,0.754420319023592,0,0,0.775284879504663,0,0,0,0,0,0,1.44048875225048,0.646793418913773,1.28602221018955,2.83744373827638,2.14042581122485,2.79733335023606,0.304464949114599,0,0,0,0.32977250588296,0.645857706783622,0.784068024066026,0.238744688006273,0.984845398470368,0,0.927126510052548,0,0.412773735926445,0.370389054739423,0.565105371014073,0.136694227721025,0,1.01987057996313,0,0.552799895217695,0,1.26534397432454,1.01659733563424,0.540026704109006,1.25452977608681,0.218362563746178,0.134864346384821,0.826534557253359,0,0.129614973291793,0,15.2197093444731,0.897099276263873,0.827292452285488,0,0.258319646955462,0.675824501963113,1.87771581833206,2.21347454234715,2.41176492179135,6.03960302065015,22.1783104818556,0,0.608175645870493,0,0.51968329191118,0.179026695667481,0,0.480781798079875,0.590758108698309,0.605798699688886,0.381034033274999,0.403304740547362,0.194915761479505,0.192423683280659,0.467507608726276,0.226730383615211,0,0.179427713218951,0,0,0,0.36630324853453,0.214368379079066,0,3.95326289831947,1.84130094602871,1.14579102687879,1.3748254587495,1.37016503954128,0,1.35004500046361,0.45032120322422,0,0.51776031175182,1.55681021376265,4.38927360741134,2.39027048055788,4.132814190161,1.88651846365184,0.551530525350042,3.77819437262746,2.88449080134452,1.92551525755089,2.52697211763797,2.5347929989024,2.26351609663291,2.06011316433741,2.36893063898016,3.27382173046996,0.476293691283074,2.20180219295225,3.8581844092741,2.47251540481984,0.883193520806384,2.05721551431249,1.59728225543404,1.43061713968393,1.74415699958794,2.54095327121393,2.70766745253365,2.74391959309159,0.526139422875686,1.49384525230448,1.12228454331548,2.84724043498018,3.15214343601803,2.45538625901814,2.01417893541756,1.15743966588685,1.74867404556562,1.87145286756327,3.22306581072447,0.956441660344217,0.220591419119515,0.463735671240843
|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,5.69790044012167,0.198581902401771,0,0.319984845586813,0,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,3.03474691289397,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0.384218305321555,5.80661828927475,3.24014251996058,4.41682418837902,1.14260393761521,0.883474163806454,5.02212276781312,3.83381884072945,2.75765635983006,0,0.510749352340751,0.46081959976873,2.76961204233407,2.01272815925301,4.16730696445408,0,0.56276261003168,1.06958773443767,2.94628585473668,2.98980529678116,1.86399445825301,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.823120949949934,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0.599902730993408,0.381210681219194,1.19832511523858,5.03250663100489,14.4502504929794,1.39059456153821,2.55715457330331,1.24672826735736,2.43361894601636,2.24046600470696,0.124406970610093,0.252722758433675,0.210441855886474,1.69156575851515,2.29902104433473,2.52086981727489,3.0140963567143,3.74200745332303,4.09963904911519,2.52994656311268,0.258703370739016,0.215567992932842,1.13463648100692,1.93546236580344,0.657587197282725,1.11218899690239,0.696504333044333,0,1.39323986772945,0,0.772043721344145,0,1.03562886267751,0.938104239924385,0.540186184383045,0.23674473558521,1.18058539048442,0.925602677324269,0.232533944750408,1.07309360559848,1.05088808130453,0.329119699826961,0.656669856316381,0.324275238183423,0.146199987425332,0,0.134206418760372,0.630869845692382,16.0531195311684,0,0,0.853153002140936,2.09013004674395,0.644337306610467,1.00841762311671,0.889512175379481,0.190225626112559,0,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0.432276099749388,0,0.189667900953082,1.5994791765362,0,0.814605311381257,0.775809948670503,1.61312385747733,0.758838445491087,0,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0,0,0.744281895337007,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,1.62964976442026,1.18821560042632,1.40814148973101,2.01007508930179,1.19021820443007,2.14647012643579,1.57635144106191,1.7717175171902,1.11618338060241,0.655453258862952,0.863424909329478,0.578596234326046,0,0,0,0,0.160550589987792,0.820481806145422,0,0.504941854408746,0.631016438832513,0.390438744296638,1.50796378412959,0.477937595905104,0.891194696329576,1.13230612315533,0.404810701674894,1.16902343164525,1.97643888973262,1.92792789853084,0.99358059645788,0.178065603667255,1.46598263418218,0.494910368917606,0,0.242780636154981,0.604647113929502,0.754420319023592,0,0,0.775284879504663,0,0,0,0,0,0,1.44048875225048,0.646793418913773,1.28602221018955,2.83744373827638,2.14042581122485,2.79733335023606,0.304464949114599,0,0,0,0.32977250588296,0.645857706783622,0.784068024066026,0.238744688006273,0.984845398470368,0,0.927126510052548,0,0.412773735926445,0.370389054739423,0.565105371014073,0.136694227721025,0,1.01987057996313,0,0.552799895217695,0,1.26534397432454,1.01659733563424,0.540026704109006,1.25452977608681,0.218362563746178,0.134864346384821,0.826534557253359,0,0.129614973291793,0,15.2197093444731,0.897099276263873,0.827292452285488,0,0.258319646955462,0.675824501963113,1.87771581833206,2.21347454234715,2.41176492179135,6.03960302065015,22.1783104818556,0,0.608175645870493,0,0.51968329191118,0.179026695667481,0,0.480781798079875,0.590758108698309,0.605798699688886,0.381034033274999,0.403304740547362,0.194915761479505,0.192423683280659,0.467507608726276,0.226730383615211,0,0.179427713218951,0,0,0,0.36630324853453,0.214368379079066,0,3.95326289831947,1.84130094602871,1.14579102687879,1.3748254587495,1.37016503954128,0,1.35004500046361,0.45032120322422,0,0.51776031175182,1.55681021376265,4.38927360741134,2.39027048055788,4.132814190161,1.88651846365184,0.551530525350042,3.77819437262746,2.88449080134452,1.92551525755089,2.52697211763797,2.5347929989024,2.26351609663291,2.06011316433741,2.36893063898016,3.27382173046996,0.476293691283074,2.20180219295225,3.8581844092741,2.47251540481984,0.883193520806384,2.05721551431249,1.59728225543404,1.43061713968393,1.74415699958794,2.54095327121393,2.70766745253365,2.74391959309159,0.526139422875686,1.49384525230448,1.12228454331548,2.84724043498018,3.15214343601803,2.45538625901814,2.01417893541756,1.15743966588685,1.74867404556562,1.87145286756327,3.22306581072447,0.956441660344217,0.220591419119515,0.463735671240843
|short_description=p3@Akap9
|short_description=p3@Akap9
}}
}}

Latest revision as of 00:48, 26 September 2015

Short description:p3@Akap9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Akap9_5end
Coexpression cluster:MCL_coexpression_mm9:643
Association with transcript: -165bp_to_ENSMUST00000132058, uc008wib.1_5end
EntrezGene:Akap9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Akap9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F114.45
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G116.05
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E222.18
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.53e-0823
neuroblast (sensu Vertebrata)3.53e-0823
neuron of cerebral cortex6.89e-076

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate2.56e-1349
neurectoderm2.42e-1164
neural plate2.42e-1164
presumptive neural plate2.42e-1164
anterior neural tube5.44e-1040
regional part of forebrain1.09e-0939
forebrain1.09e-0939
future forebrain1.09e-0939
gray matter2.41e-0934
ecto-epithelium6.08e-0973
neural tube1.27e-0852
neural rod1.27e-0852
future spinal cord1.27e-0852
neural keel1.27e-0852
brain5.74e-0847
future brain5.74e-0847
regional part of nervous system5.98e-0854
brain grey matter7.47e-0829
regional part of telencephalon7.47e-0829
telencephalon7.47e-0829
central nervous system9.41e-0873
ectoderm-derived structure9.84e-0895
ectoderm9.84e-0895
presumptive ectoderm9.84e-0895
regional part of brain1.48e-0746
nervous system3.00e-0775
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