FFCP PHASE1:Mm9::chr2:157392055..157392086,-: Difference between revisions
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{{FFCP|EntrezGene=53619|HGNC=|UniProt=P62951|association_with_transcript=0bp_to_ENSMUST00000109528,ENSMUST00000131902_5end|description=CAGE_peak_1_at_Blcap_5end|id=chr2:157392055..157392086,-|ontology_enrichment_celltype=CL:0000117!1.71e-14!23;CL:0000337!1.71e-14!23;CL:0000540!9.21e-09!33;CL:0000047!9.21e-09!33;CL:0000031!9.21e-09!33;CL:0000404!9.21e-09!33;CL:0000393!2.38e-08!39;CL:0000211!2.38e-08!39;CL:0000221!1.13e-07!44;CL:0000133!1.13e-07!44;CL:0002319!1.30e-07!43;CL:0000055!1.70e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-14,23;CL:0000337,1.71e-14,23;CL:0000540,9.21e-09,33;CL:0000047,9.21e-09,33;CL:0000031,9.21e-09,33;CL:0000404,9.21e-09,33;CL:0000393,2.38e-08,39;CL:0000211,2.38e-08,39;CL:0000221,1.13e-07,44;CL:0000133,1.13e-07,44;CL:0002319,1.30e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.93e-23!52;UBERON:0005068!8.93e-23!52;UBERON:0006241!8.93e-23!52;UBERON:0007135!8.93e-23!52;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0000033!2.92e-22!63;UBERON:0000955!2.35e-21!50;UBERON:0006238!2.35e-21!50;UBERON:0000073!3.11e-21!75;UBERON:0001016!3.11e-21!75;UBERON:0004121!8.17e-21!102;UBERON:0000924!8.17e-21!102;UBERON:0006601!8.17e-21!102;UBERON:0002616!8.92e-21!49;UBERON:0002346!1.82e-19!71;UBERON:0003075!1.82e-19!71;UBERON:0007284!1.82e-19!71;UBERON:0003056!1.44e-18!49;UBERON:0003080!2.39e-17!40;UBERON:0002780!1.08e-16!39;UBERON:0001890!1.08e-16!39;UBERON:0006240!1.08e-16!39;UBERON:0002020!1.42e-15!34;UBERON:0002791!1.63e-12!29;UBERON:0003528!1.63e-12!29;UBERON:0001893!1.63e-12!29;UBERON:0000025!3.68e-11!114;UBERON:0004111!1.38e-10!122;UBERON:0000956!9.20e-08!21;UBERON:0001869!9.20e-08!21;UBERON:0000203!9.20e-08!21;UBERON:0007811!6.58e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-24,54;UBERON:0001049,8.93e-23,52;UBERON:0005068,8.93e-23,52;UBERON:0006241,8.93e-23,52;UBERON:0007135,8.93e-23,52;UBERON:0001017,1.40e-22,73;UBERON:0004121,2.68e-22,95;UBERON:0000924,2.68e-22,95;UBERON:0006601,2.68e-22,95;UBERON:0002346,1.27e-21,64;UBERON:0003075,1.27e-21,64;UBERON:0007284,1.27e-21,64;UBERON:0001016,3.11e-21,75;UBERON:0010371,1.78e-20,73;UBERON:0000955,1.54e-19,47;UBERON:0006238,1.54e-19,47;UBERON:0002616,5.68e-19,46;UBERON:0003056,1.44e-18,49;UBERON:0010314,1.49e-17,92;UBERON:0003080,2.39e-17,40;UBERON:0002780,1.08e-16,39;UBERON:0001890,1.08e-16,39;UBERON:0006240,1.08e-16,39;UBERON:0002020,1.42e-15,34;UBERON:0003528,1.63e-12,29;UBERON:0002791,1.63e-12,29;UBERON:0001893,1.63e-12,29;UBERON:0000025,3.68e-11,114;UBERON:0004111,1.38e-10,122;UBERON:0000956,9.20e-08,21;UBERON:0001869,9.20e-08,21;UBERON:0000203,9.20e-08,21|phase1_expression=48.3649518256478,94.2233600626275,122.394795395785,81.6653370528441,111.198852048089,36.4298020048801,32.004931761587,12.5249623738329,17.0354353803517,20.1295492636914,15.0671812038444,16.113976117058,10.1008430659411,12.1514359362406,7.32841475994458,9.92128810210147,11.1929900500503,14.8267217718372,18.2362196695633,14.8536378129311,43.2870346868945,18.7659897769673,19.8511839745591,42.2379996174594,47.7171304619714,78.6697790837578,63.7527754315431,53.0059232407287,39.7148946663821,38.0565495937495,50.3328259187542,16.5107975099504,25.2176562909674,15.8481681015439,16.1756907060714,16.2909952451323,18.1710727073509,45.6199477503229,35.160090503571,18.3233310390829,69.4113155876597,56.0097297665925,39.3263385955234,47.0854099228659,39.2328723819521,43.3170335101568,180.732400544397,23.3286917327078,35.36947542025,34.0252323379996,34.5766461414645,35.9381410912429,11.9125650300993,12.3311564141929,14.1159395639835,36.5308399171045,30.9456115133857,50.0201929509119,182.287131234498,189.378770579388,167.331490525631,88.0995783379744,66.6971097083354,67.4924787961049,69.2206453796882,90.2309745981547,83.8880309451533,100.665195994247,65.117076529724,60.7526722492608,63.7284632894687,107.976072104638,102.924740083452,92.2355718088604,84.0564780829933,104.790941673542,101.306610519438,100.489935073043,100.458672749583,198.488863033942,178.217929737494,176.068719248185,96.8765006534792,166.014969959346,132.170484326941,114.315891163783,107.063503960925,132.530005981789,30.2147511399404,24.7874717150256,21.4499721639242,43.0211938490693,79.5566460438068,57.7482415052464,38.3368086294125,41.6665005000522,35.8133271335967,37.8355316123288,39.7472587042389,40.2807114941788,44.083990390101,21.815501160434,22.9324715735981,35.5533351576666,32.2571651106709,33.1901423772379,29.8259422558722,35.8537382317848,22.7865337609511,45.8686209710309,32.9622120855658,29.2286859179656,32.2861696158482,33.158980921577,43.6254103473465,34.3069794330014,66.0010563850778,118.860671388167,26.5383165584962,27.3385976411122,18.7715290691335,16.9706338597328,33.550517019262,77.58691120806,77.4952815209784,53.135067483387,15.4561510612637,15.5974710058286,16.1379188382792,119.383139605644,79.605104890441,114.596769126932,78.9162413672935,60.348847929958,104.932962502578,79.4982189032012,35.84745607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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53619 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P62951 | |||
|association_with_transcript=0bp_to_ENSMUST00000109528,ENSMUST00000131902_5end | |||
|cluster_id=chr2:157392055..157392086,- | |||
|description=CAGE_peak_1_at_Blcap_5end | |||
|id=chr2:157392055..157392086,- | |||
|ontology_enrichment_celltype=CL:0000117!1.71e-14!23;CL:0000337!1.71e-14!23;CL:0000540!9.21e-09!33;CL:0000047!9.21e-09!33;CL:0000031!9.21e-09!33;CL:0000404!9.21e-09!33;CL:0000393!2.38e-08!39;CL:0000211!2.38e-08!39;CL:0000221!1.13e-07!44;CL:0000133!1.13e-07!44;CL:0002319!1.30e-07!43;CL:0000055!1.70e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-14,23;CL:0000337,1.71e-14,23;CL:0000540,9.21e-09,33;CL:0000047,9.21e-09,33;CL:0000031,9.21e-09,33;CL:0000404,9.21e-09,33;CL:0000393,2.38e-08,39;CL:0000211,2.38e-08,39;CL:0000221,1.13e-07,44;CL:0000133,1.13e-07,44;CL:0002319,1.30e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.93e-23!52;UBERON:0005068!8.93e-23!52;UBERON:0006241!8.93e-23!52;UBERON:0007135!8.93e-23!52;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0000033!2.92e-22!63;UBERON:0000955!2.35e-21!50;UBERON:0006238!2.35e-21!50;UBERON:0000073!3.11e-21!75;UBERON:0001016!3.11e-21!75;UBERON:0004121!8.17e-21!102;UBERON:0000924!8.17e-21!102;UBERON:0006601!8.17e-21!102;UBERON:0002616!8.92e-21!49;UBERON:0002346!1.82e-19!71;UBERON:0003075!1.82e-19!71;UBERON:0007284!1.82e-19!71;UBERON:0003056!1.44e-18!49;UBERON:0003080!2.39e-17!40;UBERON:0002780!1.08e-16!39;UBERON:0001890!1.08e-16!39;UBERON:0006240!1.08e-16!39;UBERON:0002020!1.42e-15!34;UBERON:0002791!1.63e-12!29;UBERON:0003528!1.63e-12!29;UBERON:0001893!1.63e-12!29;UBERON:0000025!3.68e-11!114;UBERON:0004111!1.38e-10!122;UBERON:0000956!9.20e-08!21;UBERON:0001869!9.20e-08!21;UBERON:0000203!9.20e-08!21;UBERON:0007811!6.58e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-24,54;UBERON:0001049,8.93e-23,52;UBERON:0005068,8.93e-23,52;UBERON:0006241,8.93e-23,52;UBERON:0007135,8.93e-23,52;UBERON:0001017,1.40e-22,73;UBERON:0004121,2.68e-22,95;UBERON:0000924,2.68e-22,95;UBERON:0006601,2.68e-22,95;UBERON:0002346,1.27e-21,64;UBERON:0003075,1.27e-21,64;UBERON:0007284,1.27e-21,64;UBERON:0001016,3.11e-21,75;UBERON:0010371,1.78e-20,73;UBERON:0000955,1.54e-19,47;UBERON:0006238,1.54e-19,47;UBERON:0002616,5.68e-19,46;UBERON:0003056,1.44e-18,49;UBERON:0010314,1.49e-17,92;UBERON:0003080,2.39e-17,40;UBERON:0002780,1.08e-16,39;UBERON:0001890,1.08e-16,39;UBERON:0006240,1.08e-16,39;UBERON:0002020,1.42e-15,34;UBERON:0003528,1.63e-12,29;UBERON:0002791,1.63e-12,29;UBERON:0001893,1.63e-12,29;UBERON:0000025,3.68e-11,114;UBERON:0004111,1.38e-10,122;UBERON:0000956,9.20e-08,21;UBERON:0001869,9.20e-08,21;UBERON:0000203,9.20e-08,21 | |||
|phase1_expression=48.3649518256478,94.2233600626275,122.394795395785,81.6653370528441,111.198852048089,36.4298020048801,32.004931761587,12.5249623738329,17.0354353803517,20.1295492636914,15.0671812038444,16.113976117058,10.1008430659411,12.1514359362406,7.32841475994458,9.92128810210147,11.1929900500503,14.8267217718372,18.2362196695633,14.8536378129311,43.2870346868945,18.7659897769673,19.8511839745591,42.2379996174594,47.7171304619714,78.6697790837578,63.7527754315431,53.0059232407287,39.7148946663821,38.0565495937495,50.3328259187542,16.5107975099504,25.2176562909674,15.8481681015439,16.1756907060714,16.2909952451323,18.1710727073509,45.6199477503229,35.160090503571,18.3233310390829,69.4113155876597,56.0097297665925,39.3263385955234,47.0854099228659,39.2328723819521,43.3170335101568,180.732400544397,23.3286917327078,35.36947542025,34.0252323379996,34.5766461414645,35.9381410912429,11.9125650300993,12.3311564141929,14.1159395639835,36.5308399171045,30.9456115133857,50.0201929509119,182.287131234498,189.378770579388,167.331490525631,88.0995783379744,66.6971097083354,67.4924787961049,69.2206453796882,90.2309745981547,83.8880309451533,100.665195994247,65.117076529724,60.7526722492608,63.7284632894687,107.976072104638,102.924740083452,92.2355718088604,84.0564780829933,104.790941673542,101.306610519438,100.489935073043,100.458672749583,198.488863033942,178.217929737494,176.068719248185,96.8765006534792,166.014969959346,132.170484326941,114.315891163783,107.063503960925,132.530005981789,30.2147511399404,24.7874717150256,21.4499721639242,43.0211938490693,79.5566460438068,57.7482415052464,38.3368086294125,41.6665005000522,35.8133271335967,37.8355316123288,39.7472587042389,40.2807114941788,44.083990390101,21.815501160434,22.9324715735981,35.5533351576666,32.2571651106709,33.1901423772379,29.8259422558722,35.8537382317848,22.7865337609511,45.8686209710309,32.9622120855658,29.2286859179656,32.2861696158482,33.158980921577,43.6254103473465,34.3069794330014,66.0010563850778,118.860671388167,26.5383165584962,27.3385976411122,18.7715290691335,16.9706338597328,33.550517019262,77.58691120806,77.4952815209784,53.135067483387,15.4561510612637,15.5974710058286,16.1379188382792,119.383139605644,79.605104890441,114.596769126932,78.9162413672935,60.348847929958,104.932962502578,79.4982189032012,35.8474560753113,20.1539292388351,25.5249986018011,50.2956035568673,38.3855306739976,54.0269945418661,40.8741034658143,44.1565116258645,59.2597907608066,61.4945857367279,50.786334711373,57.1734449333225,29.9639510176651,45.9527774807801,42.9320742960035,43.1815592882322,46.1558433714493,36.5664774848275,31.2788847340074,41.9962302987021,10.5331978096985,14.411482798424,21.3122624546694,30.0332370176478,26.9704968978261,26.4691230347692,30.3033261549069,30.1049274573528,36.8698399800834,36.7403632705644,31.6562613651551,42.9696459911184,48.0514761747363,53.518593289785,54.8835840625443,56.7255951210289,53.7897782463074,44.9591502847245,82.8542397342661,85.5137328871854,103.421079073929,53.1545638993724,30.2869315760032,32.280897388601,30.0261184880477,30.8575792673714,25.1287189544703,33.8601614480355,45.5547899082731,27.8341233483578,39.4596277816423,30.0424272782138,32.1690743746548,45.8397898413653,41.714643625816,46.0016341217588,36.0369011810855,28.3336311272127,33.8123207019241,27.6965805869627,33.5537802799993,39.62673823803,36.2977723093237,33.3598934433901,32.3417379353232,27.3941703906397,25.4949259294948,13.3476084572875,15.1350426237166,15.0657615297852,15.4173692255262,13.5059209461353,22.1524491049835,28.4819176076303,31.940639674682,24.7105271869273,43.1304619582064,40.1912223481984,33.7000686963725,37.3816739361725,32.8297266745099,49.6916827004268,37.874403984154,24.8233749419335,27.7040459951444,27.8381940671309,33.5607055052558,42.5465893902212,45.4663354092286,48.3931446687341,44.610745782052,44.292937929755,41.1393303136317,39.3271955317771,45.7615201944623,38.7659476998451,34.6819953060326,39.1612092349471,52.1270129400178,51.600171558985,87.5000715433466,78.2974066435917,30.0000950039316,26.7619182836635,26.1871822115493,26.9402733564681,25.2045375347375,30.3490373399741,40.9949560311605,34.2522602254487,29.5511812222673,37.7010056705592,27.6701444562566,90.9339325473714,39.8851639435235,47.5435161791571,41.0475137571012,34.9736660701775,19.9117707509944,30.5903601555277,22.9765903293211,25.838895926558,24.5100571091041,23.3650712437385,31.2698234733548,31.2639007350655,26.3808060004694,26.5470876666085,25.3004660579997,24.7525303795648,156.602218646742,57.2594279019566,89.1281331263178,76.0896474362153,58.344936868308,50.478375381386,59.5667454579678,77.3340970751082,45.7609830724235,58.889315700142,26.4634077665954,37.5940656706575,36.3294960065787,30.3374012388624,33.9017456968908,31.5150527510518,37.3095470886209,81.9579834886453,16.4036045565939,24.7664241555867,27.4087900507173,9.23005439322986,11.072232445403,11.6676868335327,34.3356428587588,25.6111157752294,35.5173932677369,35.3228128665592,28.786575415883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| |||
|short_description=p1@Blcap | |||
}} |
Latest revision as of 00:54, 26 September 2015
Short description: | p1@Blcap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Blcap_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000109528, ENSMUST00000131902_5end |
EntrezGene: | Blcap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.71e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-14 | 23 |
neuron | 9.21e-09 | 33 |
neuronal stem cell | 9.21e-09 | 33 |
neuroblast | 9.21e-09 | 33 |
electrically signaling cell | 9.21e-09 | 33 |
electrically responsive cell | 2.38e-08 | 39 |
electrically active cell | 2.38e-08 | 39 |
ectodermal cell | 1.13e-07 | 44 |
neurectodermal cell | 1.13e-07 | 44 |
neural cell | 1.30e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.16e-24 | 54 |
neural tube | 8.93e-23 | 52 |
neural rod | 8.93e-23 | 52 |
future spinal cord | 8.93e-23 | 52 |
neural keel | 8.93e-23 | 52 |
central nervous system | 1.40e-22 | 73 |
ectoderm-derived structure | 2.68e-22 | 95 |
ectoderm | 2.68e-22 | 95 |
presumptive ectoderm | 2.68e-22 | 95 |
neurectoderm | 1.27e-21 | 64 |
neural plate | 1.27e-21 | 64 |
presumptive neural plate | 1.27e-21 | 64 |
nervous system | 3.11e-21 | 75 |
ecto-epithelium | 1.78e-20 | 73 |
brain | 1.54e-19 | 47 |
future brain | 1.54e-19 | 47 |
regional part of brain | 5.68e-19 | 46 |
pre-chordal neural plate | 1.44e-18 | 49 |
structure with developmental contribution from neural crest | 1.49e-17 | 92 |
anterior neural tube | 2.39e-17 | 40 |
regional part of forebrain | 1.08e-16 | 39 |
forebrain | 1.08e-16 | 39 |
future forebrain | 1.08e-16 | 39 |
gray matter | 1.42e-15 | 34 |
brain grey matter | 1.63e-12 | 29 |
regional part of telencephalon | 1.63e-12 | 29 |
telencephalon | 1.63e-12 | 29 |
tube | 3.68e-11 | 114 |
anatomical conduit | 1.38e-10 | 122 |
cerebral cortex | 9.20e-08 | 21 |
cerebral hemisphere | 9.20e-08 | 21 |
pallium | 9.20e-08 | 21 |