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FFCP PHASE1:Mm9::chr8:97958568..97958579,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:97958568..97958579,-
|DHSsupport=NA
|short_description=p3@Gtl3
|DPIdataset=NA
|description=CAGE_peak_3_at_Gtl3_5end
|association_with_transcript=189bp_to_ENSMUST00000034249,NM_008187,uc009myi.2,uc009myj.2,uc012gir.1_5end
|EntrezGene=14894
|EntrezGene=14894
|HGNC=
|HGNC=
|MCL_coexpression_id=34
|TSSclassifier=NA
|UniProt=Q8BTU1
|UniProt=Q8BTU1
|association_with_transcript=189bp_to_ENSMUST00000034249,NM_008187,uc009myi.2,uc009myj.2,uc012gir.1_5end
|cluster_id=chr8:97958568..97958579,-
|description=CAGE_peak_3_at_Gtl3_5end
|id=chr8:97958568..97958579,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.97e-11!52;UBERON:0005068!4.97e-11!52;UBERON:0006241!4.97e-11!52;UBERON:0007135!4.97e-11!52;UBERON:0000955!1.30e-10!50;UBERON:0006238!1.30e-10!50;UBERON:0002616!2.72e-10!49;UBERON:0007811!7.23e-10!86;UBERON:0000153!1.96e-09!94;UBERON:0003080!2.07e-09!40;UBERON:0002780!2.11e-09!39;UBERON:0001890!2.11e-09!39;UBERON:0006240!2.11e-09!39;UBERON:0000033!1.56e-08!63;UBERON:0000477!4.14e-08!154;UBERON:0003056!1.24e-07!49;UBERON:0001017!1.54e-07!73;UBERON:0005743!1.54e-07!73;UBERON:0002346!1.95e-07!71;UBERON:0003075!1.95e-07!71;UBERON:0007284!1.95e-07!71;UBERON:0000073!3.59e-07!75;UBERON:0001016!3.59e-07!75;UBERON:0002021!3.81e-07!10;UBERON:0000411!3.81e-07!10;UBERON:0001950!3.81e-07!10;UBERON:0000064!7.39e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.94e-19,10;UBERON:0000411,3.94e-19,10;UBERON:0001950,3.94e-19,10;UBERON:0003528,7.70e-12,29;UBERON:0002791,7.70e-12,29;UBERON:0001893,7.70e-12,29;UBERON:0002616,1.26e-11,46;UBERON:0000955,2.68e-11,47;UBERON:0006238,2.68e-11,47;UBERON:0002780,4.02e-11,39;UBERON:0001890,4.02e-11,39;UBERON:0006240,4.02e-11,39;UBERON:0003080,9.25e-11,40;UBERON:0002619,1.50e-10,17;UBERON:0000956,3.85e-10,21;UBERON:0001869,3.85e-10,21;UBERON:0000203,3.85e-10,21;UBERON:0001049,7.59e-10,52;UBERON:0005068,7.59e-10,52;UBERON:0006241,7.59e-10,52;UBERON:0007135,7.59e-10,52;UBERON:0002020,1.10e-09,34;UBERON:0000073,2.42e-09,54;UBERON:0003056,3.53e-08,49;UBERON:0002346,2.64e-07,64;UBERON:0003075,2.64e-07,64;UBERON:0007284,2.64e-07,64
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,0.30246421130683,0,0.503637815735669,0.467225281191051,0.258246646883153,1.267098499365,0.70219357896598,1.02730780935303,0.957265907944037,0.171200729931206,0.34968160967599,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0,0.680346321208558,0.0992909512008853,0.261199789138935,0.639969691173627,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0,1.10865255327652,0,0,0,0.288851619751275,0,0.204169356262369,0.837063261473815,0,0,1.17646297606203,0,0,0,0.101376931219515,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,2.18117387875057,0,0.672187598284928,0,0,0,0.404632921719196,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,0.414758449233911,0,0.210324961351382,0.285650984403804,0.662605622854841,0.244981598429908,0.0958454710182364,0,0,0.638436690425939,0.768032666281217,0.659431438650969,0.731901148819277,0,0.837548997004143,1.68828783009504,1.06958773443767,0.294628585473668,0.569486723196412,0.186399445825301,0.151452386666368,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,0,0.22836775943812,0.517875767294343,0,0.346970653532272,0,0.230615497256059,0,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.585561594023094,1.04723353406728,1.02182822083437,2.63593273913025,2.39961092397363,2.54140454146129,0.299581278809645,1.83000241127451,0.628271760564322,1.21677024134594,1.53429274398198,0.41557608911912,1.1356888414743,0.101839363850316,0.497627882440372,0.252722758433675,0,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0.756424320671277,0.175951124163949,0.657587197282725,0,0.348252166522167,0,0.199034266818493,2.80885274925294,1.28673953557358,1.13665399758237,0.207125772535502,0,0,0.473489471170421,0,0.617068451549513,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0,0.243206428637567,0.438599962275997,0.439100230582101,0.134206418760372,0.210289948564127,0.205809224758569,0.660837565967596,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0.493588655687202,0.592905254174298,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,1.17080188714679,0.315270288212382,0,0.159454768657487,0.327726629431476,0.863424909329478,0.578596234326046,0,0,0,0,0.80275294993896,1.05490517932983,0.491804836130026,0.504941854408746,0.631016438832513,0,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0.425820255624806,0,0,0.164970122972535,1.32745138339963,0,0,0,0.295301892880773,1.22974059177571,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.643011105094777,0.886701168211368,0.713475270408282,0.658196082408484,2.43571959291679,0,0.21183207086382,0.882113592219848,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0.741701208042039,0.341741761595705,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0.686334519619568,6.28920190977265,6.57771825921193,8.29199842826543,0,0.158167996790568,0,0.216010681643603,0,0.436725127492355,0.269728692769641,0.247960367176008,0.523511883968059,0.518459893167171,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0,0.632022241256357,0.202725215290164,0.205421914329655,0.389762468933385,0,0.79472541912506,0.240390899039938,0.590758108698309,0.706765149637033,0.381034033274999,0.302478555410522,0.682205165178267,0.384847366561318,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.857473516316263,0,1.12950368523413,1.84130094602871,1.14579102687879,2.06223818812425,1.37016503954128,1.5107877947794,2.70009000092722,1.80128481289688,1.81256963593682,0.51776031175182,0,0,0.341467211508268,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.382576664137687,0.661774257358546,0
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,0.30246421130683,0,0.503637815735669,0.467225281191051,0.258246646883153,1.267098499365,0.70219357896598,1.02730780935303,0.957265907944037,0.171200729931206,0.34968160967599,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0,0.680346321208558,0.0992909512008853,0.261199789138935,0.639969691173627,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0,1.10865255327652,0,0,0,0.288851619751275,0,0.204169356262369,0.837063261473815,0,0,1.17646297606203,0,0,0,0.101376931219515,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,2.18117387875057,0,0.672187598284928,0,0,0,0.404632921719196,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,0.414758449233911,0,0.210324961351382,0.285650984403804,0.662605622854841,0.244981598429908,0.0958454710182364,0,0,0.638436690425939,0.768032666281217,0.659431438650969,0.731901148819277,0,0.837548997004143,1.68828783009504,1.06958773443767,0.294628585473668,0.569486723196412,0.186399445825301,0.151452386666368,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,0,0.22836775943812,0.517875767294343,0,0.346970653532272,0,0.230615497256059,0,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.585561594023094,1.04723353406728,1.02182822083437,2.63593273913025,2.39961092397363,2.54140454146129,0.299581278809645,1.83000241127451,0.628271760564322,1.21677024134594,1.53429274398198,0.41557608911912,1.1356888414743,0.101839363850316,0.497627882440372,0.252722758433675,0,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0.756424320671277,0.175951124163949,0.657587197282725,0,0.348252166522167,0,0.199034266818493,2.80885274925294,1.28673953557358,1.13665399758237,0.207125772535502,0,0,0.473489471170421,0,0.617068451549513,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0,0.243206428637567,0.438599962275997,0.439100230582101,0.134206418760372,0.210289948564127,0.205809224758569,0.660837565967596,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0.493588655687202,0.592905254174298,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,1.17080188714679,0.315270288212382,0,0.159454768657487,0.327726629431476,0.863424909329478,0.578596234326046,0,0,0,0,0.80275294993896,1.05490517932983,0.491804836130026,0.504941854408746,0.631016438832513,0,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0.425820255624806,0,0,0.164970122972535,1.32745138339963,0,0,0,0.295301892880773,1.22974059177571,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.643011105094777,0.886701168211368,0.713475270408282,0.658196082408484,2.43571959291679,0,0.21183207086382,0.882113592219848,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0.741701208042039,0.341741761595705,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0.686334519619568,6.28920190977265,6.57771825921193,8.29199842826543,0,0.158167996790568,0,0.216010681643603,0,0.436725127492355,0.269728692769641,0.247960367176008,0.523511883968059,0.518459893167171,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0,0.632022241256357,0.202725215290164,0.205421914329655,0.389762468933385,0,0.79472541912506,0.240390899039938,0.590758108698309,0.706765149637033,0.381034033274999,0.302478555410522,0.682205165178267,0.384847366561318,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.857473516316263,0,1.12950368523413,1.84130094602871,1.14579102687879,2.06223818812425,1.37016503954128,1.5107877947794,2.70009000092722,1.80128481289688,1.81256963593682,0.51776031175182,0,0,0.341467211508268,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.382576664137687,0.661774257358546,0
|short_description=p3@Gtl3
}}
}}

Latest revision as of 01:03, 26 September 2015

Short description:p3@Gtl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gtl3_5end
Coexpression cluster:MCL_coexpression_mm9:34
Association with transcript: 189bp_to_ENSMUST00000034249, NM_008187, uc009myi.2, uc009myj.2, uc012gir.1_5end
EntrezGene:Gtl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gtl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe3.94e-1910
visual cortex3.94e-1910
neocortex3.94e-1910
brain grey matter7.70e-1229
regional part of telencephalon7.70e-1229
telencephalon7.70e-1229
regional part of brain1.26e-1146
brain2.68e-1147
future brain2.68e-1147
regional part of forebrain4.02e-1139
forebrain4.02e-1139
future forebrain4.02e-1139
anterior neural tube9.25e-1140
regional part of cerebral cortex1.50e-1017
cerebral cortex3.85e-1021
cerebral hemisphere3.85e-1021
pallium3.85e-1021
neural tube7.59e-1052
neural rod7.59e-1052
future spinal cord7.59e-1052
neural keel7.59e-1052
gray matter1.10e-0934
regional part of nervous system2.42e-0954
pre-chordal neural plate3.53e-0849
neurectoderm2.64e-0764
neural plate2.64e-0764
presumptive neural plate2.64e-0764
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