FFCP PHASE1:Mm9::chr5:53225407..53225422,+: Difference between revisions
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{{FFCP|EntrezGene=52206|HGNC=|UniProt=Q3TM92,Q91W96|association_with_transcript=33bp_to_NM_024213,uc008xkw.1,uc008xkx.1_5end|description=CAGE_peak_3_at_Anapc4_5end|id=chr5:53225407..53225422,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000077!1.53e-11!97;UBERON:0003104!1.90e-11!131;UBERON:0009142!1.90e-11!131;UBERON:0005178!3.06e-11!17;UBERON:0005181!3.06e-11!17;UBERON:0002224!3.06e-11!17;UBERON:0000915!3.06e-11!17;UBERON:0008947!3.06e-11!17;UBERON:0003258!3.06e-11!17;UBERON:0005157!4.68e-11!27;UBERON:0005153!5.50e-11!17;UBERON:0004119!2.04e-10!130;UBERON:0000925!2.04e-10!130;UBERON:0006595!2.04e-10!130;UBERON:0001041!5.50e-10!92;UBERON:0001007!1.51e-09!128;UBERON:0001555!1.51e-09!128;UBERON:0007026!1.51e-09!128;UBERON:0002048!3.25e-09!14;UBERON:0000117!3.25e-09!14;UBERON:0000171!3.25e-09!14;UBERON:0000170!3.25e-09!14;UBERON:0005597!3.25e-09!14;UBERON:0000118!3.25e-09!14;UBERON:0000065!3.99e-09!41;UBERON:0004921!4.70e-09!126;UBERON:0004185!4.70e-09!126;UBERON:0001004!8.51e-09!42;UBERON:0000926!1.63e-08!193;UBERON:0004120!1.63e-08!193;UBERON:0006603!1.63e-08!193;UBERON:0000464!3.96e-08!57;UBERON:0002100!6.08e-08!98;UBERON:0000466!3.79e-07!79;UBERON:0009569!6.23e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.89e-11,17;UBERON:0005181,1.89e-11,17;UBERON:0002224,1.89e-11,17;UBERON:0000915,1.89e-11,17;UBERON:0008947,1.89e-11,17;UBERON:0003258,1.89e-11,17;UBERON:0005153,3.45e-11,17;UBERON:0002100,1.97e-10,90;UBERON:0005157,3.03e-10,20;UBERON:0000065,1.80e-09,41;UBERON:0002048,2.22e-09,14;UBERON:0000117,2.22e-09,14;UBERON:0000171,2.22e-09,14;UBERON:0000170,2.22e-09,14;UBERON:0005597,2.22e-09,14;UBERON:0000118,2.22e-09,14;UBERON:0001004,3.95e-09,42;UBERON:0005177,1.15e-08,79;UBERON:0004119,1.25e-08,118;UBERON:0000925,1.25e-08,118;UBERON:0006595,1.25e-08,118;UBERON:0001041,2.31e-08,80;UBERON:0001007,7.89e-08,116;UBERON:0001555,7.89e-08,116;UBERON:0007026,7.89e-08,116;UBERON:0004921,2.24e-07,114;UBERON:0009569,7.87e-07,66|phase1_expression=0.960893082628764,1.39590163055744,1.36499771816861,2.11724947914781,3.00537437967808,1.00727563147134,1.63528848416868,2.96983643915625,3.37892933164,3.5109678948299,0.856089841127525,1.03703806693937,2.73921167889929,2.27293046289393,1.99865857089398,1.82227740650843,0.699561878128147,0.630924330716475,0.959801035240171,0.84877930359606,0.935476191661768,2.48227378002213,3.91799683708403,2.87986361028132,2.2940928106717,0.57423196411502,0.430761996159075,3.01659725760245,1.52018735565099,1.51218077855958,2.21730510655305,1.27006134691926,0.61506478758457,0,1.1554064790051,1.32987716286794,2.04169356262369,3.76678467663217,0.7813353445238,2.09409497589519,1.17646297606203,1.36609096991689,3.39857247121808,3.9028013572429,3.14268486780495,4.03802854755699,0,0.218025156380447,0.219686182734472,0.972149495371417,0.139986421625363,0,0.838913030288682,2.90144856804538,1.68046899571232,3.60163210450326,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0.489963196859816,0.0958454710182364,0,0,0.510749352340751,0.307213066512487,0.791317726381163,0,0.52091337055676,0.837548997004143,0.56276261003168,0.15279824777681,0.883885756421003,0.142371680799103,0.931997229126503,1.51452386666368,1.81371744256285,1.15945795480671,0,0,1.61910957491345,1.29955283489534,1.34408066129201,1.40444420131752,4.09032774187339,2.59786004602869,3.5333957451034,2.39433813620357,2.56652954828636,0,0,4.32982082022428,7.85415582972806,7.58286667522175,0.68510327831436,0,3.41416919849097,2.77576522825817,2.43572382649713,1.84492397804847,3.3158980921577,1.99900802130698,1.50799909595611,2.96633961281249,2.31358971071859,0.884610551949874,1.45590164952668,0.883366073841574,0.484875253135222,1.86391761218122,0.878342391034642,0.41889341362691,1.27728527604296,2.03685711660064,2.39961092397363,1.14363204365758,1.19832511523858,0.457500602818626,0.879580464790051,0.521472960576829,0.255715457330331,0.83115217823824,0.324482526135515,1.01839363850316,1.11966273549084,2.52722758433675,1.89397670297827,2.21204753036596,1.14951052216736,1.44049703844279,0.753524089178575,1.15662048557257,1.2811372028485,0.749613796477831,0.776110112217047,4.31135985865684,1.32374256117473,3.51902248327898,2.84954452155847,1.94633074457919,1.39300866608867,2.46938563689532,2.58744546864041,0,1.28673953557358,1.13665399758237,2.07125772535502,3.98694301967864,2.34080679899319,1.42046841351126,1.37734962223183,1.69693824176116,0.465067889500816,1.3413670069981,1.05088808130453,1.48103864922132,1.97000956894914,0.972825714550269,0.877199924551994,0.878200461164203,1.8788898626452,0.210289948564127,0.514523061896422,2.31293148088659,0.528901133327089,4.69234151177515,1.39342003116263,1.28867461322093,1.00841762311671,0.444756087689741,1.52180500890047,1.89811624617805,0.823494773620054,1.50801125280162,1.79060824837036,1.16978452271472,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52206 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3TM92,Q91W96 | |||
|association_with_transcript=33bp_to_NM_024213,uc008xkw.1,uc008xkx.1_5end | |||
|cluster_id=chr5:53225407..53225422,+ | |||
|description=CAGE_peak_3_at_Anapc4_5end | |||
|id=chr5:53225407..53225422,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000077!1.53e-11!97;UBERON:0003104!1.90e-11!131;UBERON:0009142!1.90e-11!131;UBERON:0005178!3.06e-11!17;UBERON:0005181!3.06e-11!17;UBERON:0002224!3.06e-11!17;UBERON:0000915!3.06e-11!17;UBERON:0008947!3.06e-11!17;UBERON:0003258!3.06e-11!17;UBERON:0005157!4.68e-11!27;UBERON:0005153!5.50e-11!17;UBERON:0004119!2.04e-10!130;UBERON:0000925!2.04e-10!130;UBERON:0006595!2.04e-10!130;UBERON:0001041!5.50e-10!92;UBERON:0001007!1.51e-09!128;UBERON:0001555!1.51e-09!128;UBERON:0007026!1.51e-09!128;UBERON:0002048!3.25e-09!14;UBERON:0000117!3.25e-09!14;UBERON:0000171!3.25e-09!14;UBERON:0000170!3.25e-09!14;UBERON:0005597!3.25e-09!14;UBERON:0000118!3.25e-09!14;UBERON:0000065!3.99e-09!41;UBERON:0004921!4.70e-09!126;UBERON:0004185!4.70e-09!126;UBERON:0001004!8.51e-09!42;UBERON:0000926!1.63e-08!193;UBERON:0004120!1.63e-08!193;UBERON:0006603!1.63e-08!193;UBERON:0000464!3.96e-08!57;UBERON:0002100!6.08e-08!98;UBERON:0000466!3.79e-07!79;UBERON:0009569!6.23e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.89e-11,17;UBERON:0005181,1.89e-11,17;UBERON:0002224,1.89e-11,17;UBERON:0000915,1.89e-11,17;UBERON:0008947,1.89e-11,17;UBERON:0003258,1.89e-11,17;UBERON:0005153,3.45e-11,17;UBERON:0002100,1.97e-10,90;UBERON:0005157,3.03e-10,20;UBERON:0000065,1.80e-09,41;UBERON:0002048,2.22e-09,14;UBERON:0000117,2.22e-09,14;UBERON:0000171,2.22e-09,14;UBERON:0000170,2.22e-09,14;UBERON:0005597,2.22e-09,14;UBERON:0000118,2.22e-09,14;UBERON:0001004,3.95e-09,42;UBERON:0005177,1.15e-08,79;UBERON:0004119,1.25e-08,118;UBERON:0000925,1.25e-08,118;UBERON:0006595,1.25e-08,118;UBERON:0001041,2.31e-08,80;UBERON:0001007,7.89e-08,116;UBERON:0001555,7.89e-08,116;UBERON:0007026,7.89e-08,116;UBERON:0004921,2.24e-07,114;UBERON:0009569,7.87e-07,66 | |||
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| |||
|short_description=p3@Anapc4 | |||
}} |
Latest revision as of 02:01, 26 September 2015
Short description: | p3@Anapc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Anapc4_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_NM_024213, uc008xkw.1, uc008xkx.1_5end |
EntrezGene: | Anapc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 1.89e-11 | 17 |
thoracic segment organ | 1.89e-11 | 17 |
thoracic cavity | 1.89e-11 | 17 |
thoracic segment of trunk | 1.89e-11 | 17 |
respiratory primordium | 1.89e-11 | 17 |
endoderm of foregut | 1.89e-11 | 17 |
epithelial bud | 3.45e-11 | 17 |
trunk | 1.97e-10 | 90 |
epithelial fold | 3.03e-10 | 20 |
respiratory tract | 1.80e-09 | 41 |
lung | 2.22e-09 | 14 |
respiratory tube | 2.22e-09 | 14 |
respiration organ | 2.22e-09 | 14 |
pair of lungs | 2.22e-09 | 14 |
lung primordium | 2.22e-09 | 14 |
lung bud | 2.22e-09 | 14 |
respiratory system | 3.95e-09 | 42 |
trunk region element | 1.15e-08 | 79 |
endoderm-derived structure | 1.25e-08 | 118 |
endoderm | 1.25e-08 | 118 |
presumptive endoderm | 1.25e-08 | 118 |
foregut | 2.31e-08 | 80 |
digestive system | 7.89e-08 | 116 |
digestive tract | 7.89e-08 | 116 |
primitive gut | 7.89e-08 | 116 |
subdivision of digestive tract | 2.24e-07 | 114 |
subdivision of trunk | 7.87e-07 | 66 |