FFCP PHASE1:Mm9::chr19:59245978..59245982,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22326|HGNC=|MCL_coexpression_id=470|UniProt=Q2NKI2|association_with_transcript=-352bp_to_ENSMUST00000172821_5end|description=CAGE_peak_1_at_Vax1_5end|id=chr19:59245978..59245982,-|ontology_enrichment_celltype=CL:0002609!3.46e-07!6|ontology_enrichment_celltype_v019_2=CL:0002613,1.44e-14,3;CL:0002608,4.04e-14,3;CL:0002609,2.65e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!8.04e-26!49;UBERON:0000033!3.17e-21!63;UBERON:0002780!8.71e-19!39;UBERON:0001890!8.71e-19!39;UBERON:0006240!8.71e-19!39;UBERON:0003080!3.80e-18!40;UBERON:0001894!6.42e-17!10;UBERON:0006222!6.42e-17!10;UBERON:0002346!2.10e-16!71;UBERON:0003075!2.10e-16!71;UBERON:0007284!2.10e-16!71;UBERON:0000955!4.49e-16!50;UBERON:0006238!4.49e-16!50;UBERON:0002616!5.37e-15!49;UBERON:0000007!1.02e-14!8;UBERON:0003296!1.02e-14!8;UBERON:0010133!1.02e-14!8;UBERON:0001049!9.82e-14!52;UBERON:0005068!9.82e-14!52;UBERON:0006241!9.82e-14!52;UBERON:0007135!9.82e-14!52;UBERON:0007811!3.99e-13!86;UBERON:0004121!2.18e-11!102;UBERON:0000924!2.18e-11!102;UBERON:0006601!2.18e-11!102;UBERON:0000153!2.92e-11!94;UBERON:0001017!1.25e-10!73;UBERON:0005743!1.25e-10!73;UBERON:0000073!3.75e-10!75;UBERON:0001016!3.75e-10!75;UBERON:0000369!1.80e-09!5;UBERON:0002435!1.80e-09!5;UBERON:0000204!1.80e-09!5;UBERON:0010082!1.80e-09!5;UBERON:0000970!7.72e-09!9;UBERON:0000019!7.72e-09!9;UBERON:0000047!7.72e-09!9;UBERON:0004088!7.72e-09!9;UBERON:0002104!7.72e-09!9;UBERON:0001456!7.72e-09!9;UBERON:0003072!7.72e-09!9;UBERON:0003071!7.72e-09!9;UBERON:0004128!7.72e-09!9;UBERON:0001954!9.56e-09!7;UBERON:0003022!9.56e-09!7;UBERON:0002421!9.56e-09!7;UBERON:0000349!9.56e-09!7;UBERON:0002600!9.56e-09!7;UBERON:0002791!2.28e-07!29;UBERON:0003528!2.28e-07!29;UBERON:0001893!2.28e-07!29;UBERON:0001444!5.43e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.61e-35,8;UBERON:0003296,1.61e-35,8;UBERON:0010133,1.61e-35,8;UBERON:0003056,7.39e-34,49;UBERON:0001894,3.10e-28,10;UBERON:0006222,3.10e-28,10;UBERON:0002780,2.79e-27,39;UBERON:0001890,2.79e-27,39;UBERON:0006240,2.79e-27,39;UBERON:0003080,1.54e-26,40;UBERON:0002346,2.64e-25,64;UBERON:0003075,2.64e-25,64;UBERON:0007284,2.64e-25,64;UBERON:0002616,9.34e-23,46;UBERON:0000955,3.22e-22,47;UBERON:0006238,3.22e-22,47;UBERON:0010371,7.48e-22,73;UBERON:0001049,7.65e-20,52;UBERON:0005068,7.65e-20,52;UBERON:0006241,7.65e-20,52;UBERON:0007135,7.65e-20,52;UBERON:0000073,5.15e-19,54;UBERON:0010314,9.03e-17,92;UBERON:0004121,3.75e-16,95;UBERON:0000924,3.75e-16,95;UBERON:0006601,3.75e-16,95;UBERON:0000369,6.06e-15,5;UBERON:0002435,6.06e-15,5;UBERON:0000204,6.06e-15,5;UBERON:0010082,6.06e-15,5;UBERON:0001017,2.12e-13,73;UBERON:0001016,5.66e-13,75;UBERON:0001954,2.51e-10,7;UBERON:0003022,2.51e-10,7;UBERON:0002421,2.51e-10,7;UBERON:0000349,2.51e-10,7;UBERON:0002600,2.51e-10,7;UBERON:0002420,2.13e-09,8;UBERON:0007245,2.13e-09,8;UBERON:0010009,2.13e-09,8;UBERON:0010011,2.13e-09,8;UBERON:0000454,2.13e-09,8;UBERON:0003528,6.17e-09,29;UBERON:0002791,6.17e-09,29;UBERON:0001893,6.17e-09,29;UBERON:0000970,8.39e-08,9;UBERON:0000019,8.39e-08,9;UBERON:0000047,8.39e-08,9;UBERON:0010312,8.39e-08,9;UBERON:0004088,8.39e-08,9;UBERON:0002104,8.39e-08,9;UBERON:0001456,8.39e-08,9;UBERON:0003072,8.39e-08,9;UBERON:0004128,8.39e-08,9;UBERON:0003071,8.39e-08,9;UBERON:0000025,1.26e-07,114;UBERON:0000483,1.75e-07,174;UBERON:0002020,1.81e-07,34;UBERON:0000119,2.31e-07,176;UBERON:0004111,6.03e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,0,0,2.57230678351403,2.58782771749238,2.75765635983006,0,0,0,3.56092976871523,3.01909223887952,4.16730696445408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,2.51308704225729,0,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,2.47228841629137,1.83921683546778,1.44049703844279,1.20563854268572,0.544291993210623,0.896796041993948,0.749613796477831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,1.44048875225048,1.81102157295856,3.64372959553707,6.0295679438373,6.24290861607247,8.06290200950393,5.78483403317739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.919217542250071,0.222246727801615,0,0,0,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p1@Vax1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22326 | |||
|HGNC= | |||
|MCL_coexpression_id=470 | |||
|TSSclassifier=NA | |||
|UniProt=Q2NKI2 | |||
|association_with_transcript=-352bp_to_ENSMUST00000172821_5end | |||
|cluster_id=chr19:59245978..59245982,- | |||
|description=CAGE_peak_1_at_Vax1_5end | |||
|id=chr19:59245978..59245982,- | |||
|ontology_enrichment_celltype=CL:0002609!3.46e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.44e-14,3;CL:0002608,4.04e-14,3;CL:0002609,2.65e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!8.04e-26!49;UBERON:0000033!3.17e-21!63;UBERON:0002780!8.71e-19!39;UBERON:0001890!8.71e-19!39;UBERON:0006240!8.71e-19!39;UBERON:0003080!3.80e-18!40;UBERON:0001894!6.42e-17!10;UBERON:0006222!6.42e-17!10;UBERON:0002346!2.10e-16!71;UBERON:0003075!2.10e-16!71;UBERON:0007284!2.10e-16!71;UBERON:0000955!4.49e-16!50;UBERON:0006238!4.49e-16!50;UBERON:0002616!5.37e-15!49;UBERON:0000007!1.02e-14!8;UBERON:0003296!1.02e-14!8;UBERON:0010133!1.02e-14!8;UBERON:0001049!9.82e-14!52;UBERON:0005068!9.82e-14!52;UBERON:0006241!9.82e-14!52;UBERON:0007135!9.82e-14!52;UBERON:0007811!3.99e-13!86;UBERON:0004121!2.18e-11!102;UBERON:0000924!2.18e-11!102;UBERON:0006601!2.18e-11!102;UBERON:0000153!2.92e-11!94;UBERON:0001017!1.25e-10!73;UBERON:0005743!1.25e-10!73;UBERON:0000073!3.75e-10!75;UBERON:0001016!3.75e-10!75;UBERON:0000369!1.80e-09!5;UBERON:0002435!1.80e-09!5;UBERON:0000204!1.80e-09!5;UBERON:0010082!1.80e-09!5;UBERON:0000970!7.72e-09!9;UBERON:0000019!7.72e-09!9;UBERON:0000047!7.72e-09!9;UBERON:0004088!7.72e-09!9;UBERON:0002104!7.72e-09!9;UBERON:0001456!7.72e-09!9;UBERON:0003072!7.72e-09!9;UBERON:0003071!7.72e-09!9;UBERON:0004128!7.72e-09!9;UBERON:0001954!9.56e-09!7;UBERON:0003022!9.56e-09!7;UBERON:0002421!9.56e-09!7;UBERON:0000349!9.56e-09!7;UBERON:0002600!9.56e-09!7;UBERON:0002791!2.28e-07!29;UBERON:0003528!2.28e-07!29;UBERON:0001893!2.28e-07!29;UBERON:0001444!5.43e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.61e-35,8;UBERON:0003296,1.61e-35,8;UBERON:0010133,1.61e-35,8;UBERON:0003056,7.39e-34,49;UBERON:0001894,3.10e-28,10;UBERON:0006222,3.10e-28,10;UBERON:0002780,2.79e-27,39;UBERON:0001890,2.79e-27,39;UBERON:0006240,2.79e-27,39;UBERON:0003080,1.54e-26,40;UBERON:0002346,2.64e-25,64;UBERON:0003075,2.64e-25,64;UBERON:0007284,2.64e-25,64;UBERON:0002616,9.34e-23,46;UBERON:0000955,3.22e-22,47;UBERON:0006238,3.22e-22,47;UBERON:0010371,7.48e-22,73;UBERON:0001049,7.65e-20,52;UBERON:0005068,7.65e-20,52;UBERON:0006241,7.65e-20,52;UBERON:0007135,7.65e-20,52;UBERON:0000073,5.15e-19,54;UBERON:0010314,9.03e-17,92;UBERON:0004121,3.75e-16,95;UBERON:0000924,3.75e-16,95;UBERON:0006601,3.75e-16,95;UBERON:0000369,6.06e-15,5;UBERON:0002435,6.06e-15,5;UBERON:0000204,6.06e-15,5;UBERON:0010082,6.06e-15,5;UBERON:0001017,2.12e-13,73;UBERON:0001016,5.66e-13,75;UBERON:0001954,2.51e-10,7;UBERON:0003022,2.51e-10,7;UBERON:0002421,2.51e-10,7;UBERON:0000349,2.51e-10,7;UBERON:0002600,2.51e-10,7;UBERON:0002420,2.13e-09,8;UBERON:0007245,2.13e-09,8;UBERON:0010009,2.13e-09,8;UBERON:0010011,2.13e-09,8;UBERON:0000454,2.13e-09,8;UBERON:0003528,6.17e-09,29;UBERON:0002791,6.17e-09,29;UBERON:0001893,6.17e-09,29;UBERON:0000970,8.39e-08,9;UBERON:0000019,8.39e-08,9;UBERON:0000047,8.39e-08,9;UBERON:0010312,8.39e-08,9;UBERON:0004088,8.39e-08,9;UBERON:0002104,8.39e-08,9;UBERON:0001456,8.39e-08,9;UBERON:0003072,8.39e-08,9;UBERON:0004128,8.39e-08,9;UBERON:0003071,8.39e-08,9;UBERON:0000025,1.26e-07,114;UBERON:0000483,1.75e-07,174;UBERON:0002020,1.81e-07,34;UBERON:0000119,2.31e-07,176;UBERON:0004111,6.03e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,0,0,2.57230678351403,2.58782771749238,2.75765635983006,0,0,0,3.56092976871523,3.01909223887952,4.16730696445408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,2.51308704225729,0,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,2.47228841629137,1.83921683546778,1.44049703844279,1.20563854268572,0.544291993210623,0.896796041993948,0.749613796477831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,1.44048875225048,1.81102157295856,3.64372959553707,6.0295679438373,6.24290861607247,8.06290200950393,5.78483403317739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.919217542250071,0.222246727801615,0,0,0,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p1@Vax1 | |||
}} |
Latest revision as of 02:03, 26 September 2015
Short description: | p1@Vax1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vax1_5end |
Coexpression cluster: | MCL_coexpression_mm9:470 |
Association with transcript: | -352bp_to_ENSMUST00000172821_5end |
EntrezGene: | Vax1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.44e-14 | 3 |
hippocampal neuron | 4.04e-14 | 3 |
neuron of cerebral cortex | 2.65e-07 | 6 |