Personal tools

FFCP PHASE1:Mm9::chr5:53981912..53981942,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=19664|HGNC=|MCL_coexpression_id=298|UniProt=P31266,Q3UM17|association_with_transcript=99bp_to_ENSMUST00000113865,NM_001080927,uc008xlj.1_5end|description=CAGE_peak_1_at_Rbpj_5end|id=chr5:53981912..53981942,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!9.67e-11!193;UBERON:0004120!9.67e-11!193;UBERON:0006603!9.67e-11!193;UBERON:0001048!8.94e-09!147;UBERON:0000065!1.81e-08!41;UBERON:0001004!2.84e-08!42;UBERON:0003081!7.66e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.54e-11,120;UBERON:0004120,5.54e-11,120;UBERON:0006603,5.54e-11,120;UBERON:0000153,4.26e-10,43;UBERON:0000065,1.81e-08,41;UBERON:0001048,2.04e-08,134;UBERON:0001004,2.84e-08,42;UBERON:0007811,5.94e-08,36|phase1_expression=22.9012851359855,3.14077866875425,5.45999087267443,3.62957053568196,1.50268718983904,6.88305014838748,5.60670337429262,25.5664180414321,48.0089542537184,46.8129052643987,44.8591076750823,34.3020283679947,17.8048759128454,18.8828069225034,7.32841475994458,12.3509913107794,15.3903613188192,21.7668894097184,24.5434836154272,16.5511964201232,11.9911039113008,21.5461364105921,18.8063848180033,13.5993559374396,11.6998733344257,1.72269589234506,3.4460959692726,5.38678081714723,4.56056206695297,6.04872311423834,7.76056787293567,5.71527606113668,3.69038872550742,15.8481681015439,7.51014211353314,7.97926297720763,7.14592746918292,40.1790365507431,28.1280724028568,47.6406607016156,28.2351114254887,32.1031377930469,31.0726625939938,27.0678158647491,27.0676406356104,22.3927037637251,7.82391344348039,3.48840250208714,4.17403747195497,4.47188767870852,5.45947044338914,0,24.3284778783718,13.0565185562042,23.19047214083,13.1202312378333,18.0516067161417,11.3447860301037,12.7459370341547,10.5798195854407,4.43681982454325,3.04960078862219,1.77858959222228,6.74924787961049,5.93319817540185,7.104801149461,4.49400165777607,4.61061966385865,17.2124756432073,14.9856591548177,13.2504725651371,3.99911378165325,3.09215957332259,18.2511290830282,18.4023304355014,9.19218786610021,3.30347642998166,9.95961237064464,7.68032666281217,12.6610836220986,13.3571959659518,14.0646610050325,5.02529398202486,5.6276261003168,6.87592114995646,6.77645746589436,10.6778760599327,15.2847545576746,15.8267744066355,17.3058872644539,19.4209207430124,4.30211938490693,10.1995700056163,2.15881276655127,4.54843492213368,9.85659151614138,13.0613310722529,22.1559419351475,12.2099422163348,9.54016851177919,18.1688011511918,21.815501160434,7.64415719119937,0,6.061749148314,7.85415582972806,6.57181778519218,13.245330047411,37.0281173615456,18.2583831049734,15.9606500624845,11.5696881758614,17.2961622942044,19.5939432718409,28.8092332482477,16.4623234641875,21.5059621928905,25.5940861748244,11.4999371753484,26.6915302413225,16.7839554029899,20.8496358848145,7.45567044872489,20.2018749937968,23.8769245767339,9.70736809792647,33.068974363634,19.7967901227825,31.1322056329008,10.3355541189328,9.15001205637253,14.7015591972051,10.9509321721134,12.0186264945255,9.3504620051802,11.1946471516753,39.8191912654737,20.1539292388351,14.6579199891531,18.7293251738962,24.0722819481002,17.9323641458109,27.1893816006077,34.5114032843788,38.7808045162569,34.4625907566246,29.4223415117549,16.815719098036,23.7124792226126,22.5036235399705,26.3926686245923,23.0155519048954,25.0242524303038,26.8154168222068,29.8384097791518,22.2918378836712,16.8531164955176,23.4186595474391,28.4163499395593,14.7059298500206,18.2930326785255,17.4660199617184,21.5437709382541,18.1023093207612,16.8151153047242,17.4400458562806,16.901224288176,23.5865991581682,20.899100939012,23.4759473633106,23.5099547682982,17.8363984658905,20.6377108373588,28.8543800334799,8.41159794256509,24.4912977462697,5.94753809370836,5.02456076660734,20.2623838008472,23.4559038579043,20.8765287341791,18.1515172161008,15.7888411129858,13.1255682017666,10.9141684155238,14.493508015713,16.3367885720175,18.502951899827,18.9115164505547,9.88701349519644,14.6973873914792,14.1390304010601,14.035424670528,18.2797620175566,18.0332377076929,18.7359221617689,22.8863934857798,25.9502533594179,23.7137014215965,18.7464887934095,22.1368206256338,16.0416313098341,6.81841042300442,10.8449318715461,10.614185736113,9.66907083254871,8.72298521970563,13.9882752656402,10.4396599230382,8.63088412352432,16.2135226775035,12.3552635934637,30.1913233707445,16.3742016974142,14.6657706363843,10.8608917517258,10.225652570749,13.0259750768109,24.9416806724916,13.6433816474749,27.3781160422603,29.0264096675572,26.5199980566007,28.6435700225505,31.1837169560678,25.5625078693716,41.7733131881406,40.9709675850234,34.1233204927022,27.0374469280968,27.4569121166774,28.7851626577208,31.6661696272472,23.9318500880232,13.277635371514,13.7968373152366,10.2752377592187,14.6514608240254,33.1148589660884,27.5193310652767,9.14973836307144,11.7131623288992,16.8030250231583,15.0550342710108,14.2591151412732,10.7569081699756,12.9539424535966,13.4437694639203,15.8115111178609,12.8528526568723,27.2524963599876,21.5459380437379,35.346470179726,30.189532503974,15.9294166007955,17.2374251670037,14.511530734308,14.8998013007159,8.85905678642318,19.0609791725235,22.7416897988035,21.0849563096953,24.241821730161,21.4904995396355,16.8669773719998,11.3449097573006,17.3624198934432,21.9674534718198,15.264324686365,21.2193664681276,22.699549906211,23.3663151058712,18.5940393280397,16.4411072521884,9.38686832254841,14.4045808187398,15.4369878638473,24.732937941222,30.6782410722221,22.9189114726992,19.9351814485238,17.2347944732314,13.1166376483433,17.2445530869774,14.5240248678175,20.2259130603958,23.7048995033231,15.822950388394,16.266613098802,14.4130249120109,39.0950388985867,37.0871348657694,38.2813927438254,6.68269432610579,16.9239756565907,24.195016588095,18.5769186213498,22.5815359695626,19.4342681734098,19.2856015330294,23.8041952488967,15.9671124610258,12.5726524093039,16.1548221402601,14.0923234671048,20.1847337159371,16.0494735743385,19.8340212110929,23.1196084025139,21.1195156863473,30.982311002479,24.8690375051945,24.9565239733192,19.8098979077325,17.5698303817298,20.8567339614598,11.3526120562492,19.1042380326579,21.0471733224028,27.5701111327921,25.2325320572206,25.0006535001535,30.2763530707883,33.6218278327332,30.1778954353799,32.6676839843363,27.8729538915692,35.8870169318429,39.3875160351887,17.9117003056017,10.8773117153292,9.9582380836518,8.73000005093208,25.3078368182169,17.2667877415087,22.8939530334081,15.0057865355346,13.0408747049194,12.4245405375755,7.36520378411483,4.01026859407578,6.53042092906013,9.59115527678899,14.3524840504043,8.10027000278167,12.158672487054,8.15656336171568,6.21312374102184,18.2665731748151,28.7297908848742,16.0489589408886,20.1778575166684,14.8825345465867,11.2144540154509,16.6685045851211,14.8345241212004,21.1806678330598,14.4037410705365,14.4483200937437,16.5991180419747,22.3803202853019,19.1435205690559,20.1024141344646,20.0043350338891,15.8761526544452,14.8540099757053,20.192209139362,13.9838974127677,15.4291163573437,14.5530161050657,19.0748951957857,17.5869164125118,17.0337978551748,16.7536923625519,16.2805895856768,13.1534855718921,19.0125759384206,14.0285567914435,13.8802971205284,16.253239591968,13.0953933814301,15.8035578009685,16.2041553224159,17.2369298777183,20.3520499347505,16.1153290536224,26.3977898255004,20.956184816354,18.5494268496337|short_description=p1@Rbpj}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19664
|HGNC=
|MCL_coexpression_id=298
|TSSclassifier=NA
|UniProt=P31266,Q3UM17
|association_with_transcript=99bp_to_ENSMUST00000113865,NM_001080927,uc008xlj.1_5end
|cluster_id=chr5:53981912..53981942,+
|description=CAGE_peak_1_at_Rbpj_5end
|id=chr5:53981912..53981942,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!9.67e-11!193;UBERON:0004120!9.67e-11!193;UBERON:0006603!9.67e-11!193;UBERON:0001048!8.94e-09!147;UBERON:0000065!1.81e-08!41;UBERON:0001004!2.84e-08!42;UBERON:0003081!7.66e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.54e-11,120;UBERON:0004120,5.54e-11,120;UBERON:0006603,5.54e-11,120;UBERON:0000153,4.26e-10,43;UBERON:0000065,1.81e-08,41;UBERON:0001048,2.04e-08,134;UBERON:0001004,2.84e-08,42;UBERON:0007811,5.94e-08,36
|phase1_expression=22.9012851359855,3.14077866875425,5.45999087267443,3.62957053568196,1.50268718983904,6.88305014838748,5.60670337429262,25.5664180414321,48.0089542537184,46.8129052643987,44.8591076750823,34.3020283679947,17.8048759128454,18.8828069225034,7.32841475994458,12.3509913107794,15.3903613188192,21.7668894097184,24.5434836154272,16.5511964201232,11.9911039113008,21.5461364105921,18.8063848180033,13.5993559374396,11.6998733344257,1.72269589234506,3.4460959692726,5.38678081714723,4.56056206695297,6.04872311423834,7.76056787293567,5.71527606113668,3.69038872550742,15.8481681015439,7.51014211353314,7.97926297720763,7.14592746918292,40.1790365507431,28.1280724028568,47.6406607016156,28.2351114254887,32.1031377930469,31.0726625939938,27.0678158647491,27.0676406356104,22.3927037637251,7.82391344348039,3.48840250208714,4.17403747195497,4.47188767870852,5.45947044338914,0,24.3284778783718,13.0565185562042,23.19047214083,13.1202312378333,18.0516067161417,11.3447860301037,12.7459370341547,10.5798195854407,4.43681982454325,3.04960078862219,1.77858959222228,6.74924787961049,5.93319817540185,7.104801149461,4.49400165777607,4.61061966385865,17.2124756432073,14.9856591548177,13.2504725651371,3.99911378165325,3.09215957332259,18.2511290830282,18.4023304355014,9.19218786610021,3.30347642998166,9.95961237064464,7.68032666281217,12.6610836220986,13.3571959659518,14.0646610050325,5.02529398202486,5.6276261003168,6.87592114995646,6.77645746589436,10.6778760599327,15.2847545576746,15.8267744066355,17.3058872644539,19.4209207430124,4.30211938490693,10.1995700056163,2.15881276655127,4.54843492213368,9.85659151614138,13.0613310722529,22.1559419351475,12.2099422163348,9.54016851177919,18.1688011511918,21.815501160434,7.64415719119937,0,6.061749148314,7.85415582972806,6.57181778519218,13.245330047411,37.0281173615456,18.2583831049734,15.9606500624845,11.5696881758614,17.2961622942044,19.5939432718409,28.8092332482477,16.4623234641875,21.5059621928905,25.5940861748244,11.4999371753484,26.6915302413225,16.7839554029899,20.8496358848145,7.45567044872489,20.2018749937968,23.8769245767339,9.70736809792647,33.068974363634,19.7967901227825,31.1322056329008,10.3355541189328,9.15001205637253,14.7015591972051,10.9509321721134,12.0186264945255,9.3504620051802,11.1946471516753,39.8191912654737,20.1539292388351,14.6579199891531,18.7293251738962,24.0722819481002,17.9323641458109,27.1893816006077,34.5114032843788,38.7808045162569,34.4625907566246,29.4223415117549,16.815719098036,23.7124792226126,22.5036235399705,26.3926686245923,23.0155519048954,25.0242524303038,26.8154168222068,29.8384097791518,22.2918378836712,16.8531164955176,23.4186595474391,28.4163499395593,14.7059298500206,18.2930326785255,17.4660199617184,21.5437709382541,18.1023093207612,16.8151153047242,17.4400458562806,16.901224288176,23.5865991581682,20.899100939012,23.4759473633106,23.5099547682982,17.8363984658905,20.6377108373588,28.8543800334799,8.41159794256509,24.4912977462697,5.94753809370836,5.02456076660734,20.2623838008472,23.4559038579043,20.8765287341791,18.1515172161008,15.7888411129858,13.1255682017666,10.9141684155238,14.493508015713,16.3367885720175,18.502951899827,18.9115164505547,9.88701349519644,14.6973873914792,14.1390304010601,14.035424670528,18.2797620175566,18.0332377076929,18.7359221617689,22.8863934857798,25.9502533594179,23.7137014215965,18.7464887934095,22.1368206256338,16.0416313098341,6.81841042300442,10.8449318715461,10.614185736113,9.66907083254871,8.72298521970563,13.9882752656402,10.4396599230382,8.63088412352432,16.2135226775035,12.3552635934637,30.1913233707445,16.3742016974142,14.6657706363843,10.8608917517258,10.225652570749,13.0259750768109,24.9416806724916,13.6433816474749,27.3781160422603,29.0264096675572,26.5199980566007,28.6435700225505,31.1837169560678,25.5625078693716,41.7733131881406,40.9709675850234,34.1233204927022,27.0374469280968,27.4569121166774,28.7851626577208,31.6661696272472,23.9318500880232,13.277635371514,13.7968373152366,10.2752377592187,14.6514608240254,33.1148589660884,27.5193310652767,9.14973836307144,11.7131623288992,16.8030250231583,15.0550342710108,14.2591151412732,10.7569081699756,12.9539424535966,13.4437694639203,15.8115111178609,12.8528526568723,27.2524963599876,21.5459380437379,35.346470179726,30.189532503974,15.9294166007955,17.2374251670037,14.511530734308,14.8998013007159,8.85905678642318,19.0609791725235,22.7416897988035,21.0849563096953,24.241821730161,21.4904995396355,16.8669773719998,11.3449097573006,17.3624198934432,21.9674534718198,15.264324686365,21.2193664681276,22.699549906211,23.3663151058712,18.5940393280397,16.4411072521884,9.38686832254841,14.4045808187398,15.4369878638473,24.732937941222,30.6782410722221,22.9189114726992,19.9351814485238,17.2347944732314,13.1166376483433,17.2445530869774,14.5240248678175,20.2259130603958,23.7048995033231,15.822950388394,16.266613098802,14.4130249120109,39.0950388985867,37.0871348657694,38.2813927438254,6.68269432610579,16.9239756565907,24.195016588095,18.5769186213498,22.5815359695626,19.4342681734098,19.2856015330294,23.8041952488967,15.9671124610258,12.5726524093039,16.1548221402601,14.0923234671048,20.1847337159371,16.0494735743385,19.8340212110929,23.1196084025139,21.1195156863473,30.982311002479,24.8690375051945,24.9565239733192,19.8098979077325,17.5698303817298,20.8567339614598,11.3526120562492,19.1042380326579,21.0471733224028,27.5701111327921,25.2325320572206,25.0006535001535,30.2763530707883,33.6218278327332,30.1778954353799,32.6676839843363,27.8729538915692,35.8870169318429,39.3875160351887,17.9117003056017,10.8773117153292,9.9582380836518,8.73000005093208,25.3078368182169,17.2667877415087,22.8939530334081,15.0057865355346,13.0408747049194,12.4245405375755,7.36520378411483,4.01026859407578,6.53042092906013,9.59115527678899,14.3524840504043,8.10027000278167,12.158672487054,8.15656336171568,6.21312374102184,18.2665731748151,28.7297908848742,16.0489589408886,20.1778575166684,14.8825345465867,11.2144540154509,16.6685045851211,14.8345241212004,21.1806678330598,14.4037410705365,14.4483200937437,16.5991180419747,22.3803202853019,19.1435205690559,20.1024141344646,20.0043350338891,15.8761526544452,14.8540099757053,20.192209139362,13.9838974127677,15.4291163573437,14.5530161050657,19.0748951957857,17.5869164125118,17.0337978551748,16.7536923625519,16.2805895856768,13.1534855718921,19.0125759384206,14.0285567914435,13.8802971205284,16.253239591968,13.0953933814301,15.8035578009685,16.2041553224159,17.2369298777183,20.3520499347505,16.1153290536224,26.3977898255004,20.956184816354,18.5494268496337
|short_description=p1@Rbpj
}}

Latest revision as of 02:17, 26 September 2015

Short description:p1@Rbpj
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rbpj_5end
Coexpression cluster:MCL_coexpression_mm9:298
Association with transcript: 99bp_to_ENSMUST00000113865, NM_001080927, uc008xlj.1_5end
EntrezGene:Rbpj
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rbpj

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.90
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E748.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F246.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E644.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F134.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.35
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.77
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G840.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H347.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H431.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.07
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A224.33
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.19
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C312.75
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D915.83
Mouse Schwann, donor2.CNhs12573.11746-123F917.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.42
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.25
accessory axillary lymph node, adult.CNhs10475.1063-29H937.03
adrenal gland, adult.CNhs10508.49-24D718.26
adrenal gland, embryo E14.CNhs11038.406-44C515.96
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I117.30
adrenal gland, embryo E18.CNhs11026.1262-18F519.59
adrenal gland, neonate N00.CNhs11191.1311-23C128.81
adrenal gland, neonate N25.CNhs11223.1377-27I316.46
amnion, adult pregnant day17.5.CNhs10488.583-22A821.51
aorta, adult.CNhs10498.46-23H125.59
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F526.69
bone (os femoris), neonate N16.CNhs11225.1525-43A616.78
bone (os femoris), neonate N20.CNhs11195.1350-25C320.85
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B220.20
cerebellum, neonate N30.CNhs11135.1395-42I223.88
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C733.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.13
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F114.70
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F29.35
diencephalon, neonate N30.CNhs11201.1388-42B211.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B139.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.15
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G418.73
eyeball, embryo E12.CNhs11016.345-16C624.07
eyeball, embryo E14.CNhs10521.399-16E217.93
eyeball, embryo E15.CNhs10593.426-16C927.19
eyeball, embryo E17.CNhs11023.1261-18D434.51
eyeball, neonate N00.CNhs11207.633-15C638.78
eyeball, neonate N01.CNhs11140.1532-43E734.46
eyeball, neonate N02.CNhs11205.1551-44G829.42
eyeball, neonate N16.CNhs11188.777-19A216.82
forelimb, embryo E11.CNhs10596.335-25E223.71
forelimb, embryo E12.CNhs10600.359-14H222.50
forelimb, embryo E13.CNhs10589.384-1E226.39
forelimb, embryo E14.CNhs10577.413-26A823.02
forelimb, embryo E15.CNhs11007.437-20E725.02
forelimb, embryo E17.CNhs10598.1517-43C426.82
forelimb, embryo E18.CNhs11008.1520-43B529.84
gonad, embryo E13.CNhs11044.1564-45I622.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.85
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D223.42
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D528.42
heart, embryo E11.CNhs10586.331-24E914.71
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I917.47
heart, embryo E14.CNhs10597.403-26D421.54
heart, embryo E15.CNhs11017.431-16C818.10
heart, embryo E16.CNhs11021.457-17C616.82
heart, embryo E17.CNhs11025.479-18E517.44
heart, embryo E18.CNhs11030.1283-20G316.90
heart, neonate N00.CNhs11213.639-21E323.59
heart, neonate N03.CNhs11221.1349-25I220.90
heart, neonate N10.CNhs11118.749-24G123.48
heart, neonate N16.CNhs11209.782-15G123.51
heart, neonate N20.CNhs11127.821-26I617.84
heart, neonate N25.CNhs11196.1351-25D320.64
heart, neonate N30.CNhs11202.1390-42D228.85
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G124.49
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I520.26
intestine, embryo E13.CNhs11010.381-16D523.46
intestine, embryo E15.CNhs10602.976-16D820.88
intestine, embryo E16.CNhs10585.463-22H418.15
intestine, embryo E17.CNhs10582.482-18D315.79
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E914.49
intestine, neonate N06.CNhs11102.688-20B816.34
intestine, neonate N07.CNhs11095.720-20F218.50
intestine, neonate N10.CNhs11098.755-23A518.91
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E314.70
intestine, neonate N30.CNhs11131.1384-42G114.14
kidney, embryo E14.CNhs10606.411-4I914.04
kidney, embryo E15.CNhs10997.434-16F818.28
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I218.74
kidney, embryo E18.CNhs11001.1288-20C722.89
kidney, neonate N00.CNhs11214.646-21G725.95
kidney, neonate N10.CNhs11206.758-6D523.71
kidney, neonate N20.CNhs11113.832-19I118.75
kidney, neonate N25.CNhs11122.1353-25F322.14
kidney, neonate N30.CNhs11203.1385-42H116.04
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F810.84
liver, embryo E13.CNhs10524.378-3H610.61
liver, embryo E14.CNhs10594.409-16E19.67
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F513.99
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G48.63
liver, neonate N00.CNhs11117.641-24F416.21
liver, neonate N03.CNhs11123.1345-25G212.36
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B914.67
liver, neonate N20.CNhs11220.823-25A310.86
liver, neonate N25.CNhs11198.1368-26H110.23
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B124.94
lung, embryo E12.CNhs10522.354-16G213.64
lung, embryo E14.CNhs10604.404-26F827.38
lung, embryo E15.CNhs11020.432-17C529.03
lung, embryo E16.CNhs10998.458-17B626.52
lung, embryo E17.CNhs10605.480-44A628.64
lung, embryo E18.CNhs10583.1287-20I631.18
lung, neonate N00.CNhs11224.640-42C625.56
lung, neonate N06.CNhs11212.683-20E541.77
lung, neonate N07.CNhs11111.715-19A340.97
lung, neonate N10.CNhs11219.750-23E634.12
lung, neonate N20.CNhs11109.822-18A427.04
lung, neonate N25.CNhs11119.1359-25C727.46
lung, neonate N30.CNhs11133.1394-42H228.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A131.67
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H213.80
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A314.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C733.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I727.25
ovary, embryo E18.CNhs11040.505-44H721.55
ovary, neonate N00.CNhs11217.1299-22I435.35
oviduct, adult pregnant day01.CNhs10500.988-6G630.19
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F417.24
pancreas, embryo E15.CNhs11042.1556-45F214.51
pancreas, embryo E16.CNhs11003.460-26E514.90
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I719.06
pancreas, neonate N00.CNhs11105.645-26G922.74
pancreas, neonate N01.CNhs11138.1531-43D721.08
pancreas, neonate N02.CNhs11139.1539-43D824.24
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G817.36
pituitary gland, embryo E12.CNhs11018.346-16E621.97
pituitary gland, embryo E13.CNhs11009.370-44C715.26
pituitary gland, embryo E14.CNhs11037.398-44A521.22
pituitary gland, embryo E15.CNhs10592.427-16B922.70
pituitary gland, embryo E16.CNhs11036.449-43F623.37
pituitary gland, embryo E17.CNhs11039.1265-44F518.59
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G314.40
prostate, adult.CNhs10470.859-1F815.44
skin, adult.CNhs10492.30-1C324.73
skin, neonate N00.CNhs11124.650-25G430.68
skin, neonate N03.CNhs11215.662-22H322.92
skin, neonate N06.CNhs11097.693-20I519.94
skin, neonate N10.CNhs11108.762-6C417.23
small intestine, neonate N16.CNhs11114.790-21I113.12
spinal cord, adult.CNhs10505.24-13C917.24
spleen, adult.CNhs10465.25-2G214.52
spleen, embryo E16.CNhs11035.461-43C120.23
spleen, embryo E18.CNhs11011.1271-21F223.70
spleen, neonate N10.CNhs11116.752-24D115.82
spleen, neonate N20.CNhs11112.824-19H116.27
spleen, neonate N25.CNhs11099.1354-25G314.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C639.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D338.28
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E316.92
stomach, embryo E15.CNhs10603.1252-16G824.20
stomach, embryo E16.CNhs11022.459-17D418.58
stomach, embryo E17.CNhs11006.1035-18D522.58
stomach, embryo E18.CNhs10999.1286-20C619.43
stomach, neonate N03.CNhs11193.1340-24B819.29
stomach, neonate N07.CNhs11210.718-18A923.80
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I112.57
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F520.18
testis, embryo E15.CNhs11034.443-27C516.05
testis, embryo E16.CNhs11033.470-26G519.83
testis, embryo E17.CNhs11029.486-18I523.12
testis, embryo E18.CNhs11027.503-18G521.12
testis, neonate N00.CNhs11189.1300-22B730.98
testis, neonate N07.CNhs11222.726-26I424.87
testis, neonate N10.CNhs11204.763-44D924.96
testis, neonate N20.CNhs11110.839-18H319.81
testis, neonate N30.CNhs11130.1391-42E217.57
thymus, adult.CNhs10471.38-12B520.86
thymus, embryo E14.CNhs11041.402-44I411.35
thymus, embryo E15.CNhs11005.430-45I219.10
thymus, embryo E16.CNhs11002.456-26C521.05
thymus, embryo E17.CNhs10581.478-18C127.57
thymus, embryo E18.CNhs10595.1273-19G425.23
thymus, neonate N02.CNhs11181.1541-43F825.00
thymus, neonate N03.CNhs11137.2104-43C730.28
thymus, neonate N06.CNhs11197.681-26C433.62
thymus, neonate N07.CNhs11211.713-19D330.18
thymus, neonate N10.CNhs11194.748-24E432.67
thymus, neonate N20.CNhs11186.820-7A227.87
thymus, neonate N25.CNhs11125.1362-25G735.89
thymus, neonate N30.CNhs11132.1393-42G239.39
tongue, adult.CNhs10499.32-1B417.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.73
urinary bladder, adult.CNhs10481.879-12E425.31
uterus, adult pregnant day19.CNhs10497.590-15F517.27
uterus, adult.CNhs10509.92-27E522.89
vagina, adult.CNhs10502.89-27D515.01
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I818.27
whole body, embryo E12.CNhs10587.857-27C928.73
whole body, embryo E13.CNhs10512.372-23H216.05
whole body, embryo E14.5.CNhs10578.420-27D220.18
whole body, embryo E14.CNhs10519.395-14B114.88
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.38
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.85
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.03
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.80
whole body, embryo E17.5.CNhs10513.490-9F916.20
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B320.35
whole body, neonate N00.CNhs10525.657-19C216.12
whole body, neonate N01.CNhs10576.659-23C626.40
whole body, neonate N06.CNhs10515.692-21D120.96
whole body, neonate N10.CNhs10518.761-6B418.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesoderm5.54e-11120
mesoderm-derived structure5.54e-11120
presumptive mesoderm5.54e-11120
anterior region of body4.26e-1043
respiratory tract1.81e-0841
primordium2.04e-08134
respiratory system2.84e-0842
craniocervical region5.94e-0836
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:53981912..53981942,%2B&oldid=4227304"