FFCP PHASE1:Mm9::chr9:106105439..106105502,+: Difference between revisions
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{{FFCP|EntrezGene=23999|HGNC=|MCL_coexpression_id=116|UniProt=Q9Z0P5|association_with_transcript=0bp_to_ENSMUST00000024047,NM_011876,uc009rjf.1_5end|description=CAGE_peak_1_at_Twf2_5end|id=chr9:106105439..106105502,+|ontology_enrichment_celltype=CL:0000219!5.18e-09!54;CL:0000988!6.08e-08!32;CL:0002032!6.08e-08!32;CL:0000037!6.08e-08!32;CL:0000566!6.08e-08!32;CL:0000837!6.08e-08!32;CL:0002320!3.56e-07!46;CL:0000134!3.56e-07!46;CL:0000738!5.86e-07!17;CL:0002087!5.86e-07!17;CL:0000034!8.98e-07!97|ontology_enrichment_celltype_v019_2=CL:0000219,5.18e-09,54;CL:0000988,6.05e-08,32;CL:0002032,6.05e-08,32;CL:0000037,6.05e-08,32;CL:0000837,6.05e-08,32;CL:0002320,3.56e-07,46;CL:0000134,3.56e-07,46;CL:0000738,5.86e-07,17;CL:0002087,5.86e-07,17;CL:0000034,8.98e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.48e-13!48;UBERON:0002390!8.59e-13!45;UBERON:0003061!8.59e-13!45;UBERON:0000153!3.85e-10!94;UBERON:0007811!7.86e-10!86;UBERON:0002616!3.65e-08!49;UBERON:0001049!5.59e-08!52;UBERON:0005068!5.59e-08!52;UBERON:0006241!5.59e-08!52;UBERON:0007135!5.59e-08!52;UBERON:0002791!5.94e-08!29;UBERON:0003528!5.94e-08!29;UBERON:0001893!5.94e-08!29;UBERON:0002020!7.07e-08!34;UBERON:0000955!9.07e-08!50;UBERON:0006238!9.07e-08!50;UBERON:0002780!1.08e-07!39;UBERON:0001890!1.08e-07!39;UBERON:0006240!1.08e-07!39;UBERON:0003080!1.24e-07!40;UBERON:0003081!1.94e-07!88;UBERON:0000956!2.67e-07!21;UBERON:0001869!2.67e-07!21;UBERON:0000203!2.67e-07!21;UBERON:0004177!3.08e-07!29;UBERON:0002384!3.56e-07!46;UBERON:0001474!4.63e-07!22;UBERON:0004765!4.63e-07!22;UBERON:0001434!4.63e-07!22;UBERON:0001017!5.69e-07!73;UBERON:0005743!5.69e-07!73;UBERON:0000073!7.36e-07!75;UBERON:0001016!7.36e-07!75;UBERON:0002371!9.34e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.48e-13,48;UBERON:0002405,2.48e-13,48;UBERON:0002390,8.59e-13,45;UBERON:0003061,8.59e-13,45;UBERON:0000926,1.41e-09,120;UBERON:0004120,1.41e-09,120;UBERON:0006603,1.41e-09,120;UBERON:0000073,2.62e-08,54;UBERON:0001049,5.59e-08,52;UBERON:0005068,5.59e-08,52;UBERON:0006241,5.59e-08,52;UBERON:0007135,5.59e-08,52;UBERON:0003528,5.94e-08,29;UBERON:0002791,5.94e-08,29;UBERON:0001893,5.94e-08,29;UBERON:0002616,6.89e-08,46;UBERON:0002020,7.07e-08,34;UBERON:0002780,1.08e-07,39;UBERON:0001890,1.08e-07,39;UBERON:0006240,1.08e-07,39;UBERON:0003080,1.24e-07,40;UBERON:0000955,1.73e-07,47;UBERON:0006238,1.73e-07,47;UBERON:0000956,2.67e-07,21;UBERON:0001869,2.67e-07,21;UBERON:0000203,2.67e-07,21;UBERON:0004177,3.08e-07,29;UBERON:0005057,3.08e-07,29;UBERON:0002384,3.56e-07,46;UBERON:0003081,4.25e-07,87;UBERON:0001474,4.63e-07,22;UBERON:0004765,4.63e-07,22;UBERON:0001434,4.63e-07,22;UBERON:0001017,5.69e-07,73;UBERON:0001016,7.36e-07,75;UBERON:0002371,9.34e-07,16|phase1_expression=46.1228679661807,3.83872948403297,6.3699893514535,1.51232105653415,2.50447864973174,9.06548068324205,11.2134067485852,95.1638893764417,18.7249000461717,19.8954847373694,11.3003859028833,14.1196721421745,64.3714744541333,68.7998567037509,15.3230490435205,14.1732687172878,6.99561878128147,48.1079802171312,47.9900517620086,40.3170169208129,13.6069264241712,45.9717104060099,45.7099630993137,15.6792574337539,22.0232909824483,10.9104073181854,8.61523992318149,9.04979177280734,5.32065574477847,8.31699428207772,10.199603490144,17.14582818341,11.6862309641068,0,7.51014211353314,8.14549762256613,5.51257261908397,210.102878629928,156.26706890476,178.521596695065,229.998511820127,220.623691641578,243.240686868608,10.0717454380462,9.93493925951243,10.4621648732158,93.8869613217647,23.3286917327078,34.0513583238431,26.053606475954,24.2176509411877,41.6882436658418,29.5297386661616,55.8528849348735,46.7170380808025,16.2073444702647,18.3381401560804,22.6895720602075,24.2779753031517,19.0436752537932,25.9870875437533,60.3143267083055,36.4610866405567,108.437915932409,118.663963508037,140.675062759328,72.2036266349355,59.1696190195194,17.6272340924412,21.3309382564071,21.0324961351382,25.9942395807461,23.8538024227743,17.6386750869534,20.2233943848479,20.2228133054205,19.82085857989,18.7700386985226,19.3544231902867,22.1568963386726,20.4932321669398,18.7528813400434,25.9640189071284,20.2594539611405,19.4053774676549,12.9636577608414,16.0879999302986,14.911955666024,15.3724172466364,14.6608826607164,14.4932244350839,6.88339101585109,0,0.539703191637817,1.29955283489534,1.34408066129201,11.5164424508037,20.9629296771011,28.5764605063156,33.213920003972,32.5348299684132,16.6824420638613,28.028576367731,21.3320010945999,10.6080610095495,8.86759529162845,8.08839112023653,6.73684890342454,36.7691794778984,27.1649114488629,26.7167403219849,21.0081180035377,32.7474006103603,34.3647620459979,21.4011446986983,39.7106428601775,14.8316980640624,9.39895819979426,38.0382537338446,13.2648816956876,17.8881629952919,11.6370060752453,1.86391761218122,13.7606974595427,16.546289838263,8.17462576667492,31.1519323715393,27.5955256256968,38.2481383489925,16.1773890557209,16.0125210986519,18.471189760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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=23999 | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0P5 | |||
|association_with_transcript=0bp_to_ENSMUST00000024047,NM_011876,uc009rjf.1_5end | |||
|cluster_id=chr9:106105439..106105502,+ | |||
|description=CAGE_peak_1_at_Twf2_5end | |||
|id=chr9:106105439..106105502,+ | |||
|ontology_enrichment_celltype=CL:0000219!5.18e-09!54;CL:0000988!6.08e-08!32;CL:0002032!6.08e-08!32;CL:0000037!6.08e-08!32;CL:0000566!6.08e-08!32;CL:0000837!6.08e-08!32;CL:0002320!3.56e-07!46;CL:0000134!3.56e-07!46;CL:0000738!5.86e-07!17;CL:0002087!5.86e-07!17;CL:0000034!8.98e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.18e-09,54;CL:0000988,6.05e-08,32;CL:0002032,6.05e-08,32;CL:0000037,6.05e-08,32;CL:0000837,6.05e-08,32;CL:0002320,3.56e-07,46;CL:0000134,3.56e-07,46;CL:0000738,5.86e-07,17;CL:0002087,5.86e-07,17;CL:0000034,8.98e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.48e-13!48;UBERON:0002390!8.59e-13!45;UBERON:0003061!8.59e-13!45;UBERON:0000153!3.85e-10!94;UBERON:0007811!7.86e-10!86;UBERON:0002616!3.65e-08!49;UBERON:0001049!5.59e-08!52;UBERON:0005068!5.59e-08!52;UBERON:0006241!5.59e-08!52;UBERON:0007135!5.59e-08!52;UBERON:0002791!5.94e-08!29;UBERON:0003528!5.94e-08!29;UBERON:0001893!5.94e-08!29;UBERON:0002020!7.07e-08!34;UBERON:0000955!9.07e-08!50;UBERON:0006238!9.07e-08!50;UBERON:0002780!1.08e-07!39;UBERON:0001890!1.08e-07!39;UBERON:0006240!1.08e-07!39;UBERON:0003080!1.24e-07!40;UBERON:0003081!1.94e-07!88;UBERON:0000956!2.67e-07!21;UBERON:0001869!2.67e-07!21;UBERON:0000203!2.67e-07!21;UBERON:0004177!3.08e-07!29;UBERON:0002384!3.56e-07!46;UBERON:0001474!4.63e-07!22;UBERON:0004765!4.63e-07!22;UBERON:0001434!4.63e-07!22;UBERON:0001017!5.69e-07!73;UBERON:0005743!5.69e-07!73;UBERON:0000073!7.36e-07!75;UBERON:0001016!7.36e-07!75;UBERON:0002371!9.34e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.48e-13,48;UBERON:0002405,2.48e-13,48;UBERON:0002390,8.59e-13,45;UBERON:0003061,8.59e-13,45;UBERON:0000926,1.41e-09,120;UBERON:0004120,1.41e-09,120;UBERON:0006603,1.41e-09,120;UBERON:0000073,2.62e-08,54;UBERON:0001049,5.59e-08,52;UBERON:0005068,5.59e-08,52;UBERON:0006241,5.59e-08,52;UBERON:0007135,5.59e-08,52;UBERON:0003528,5.94e-08,29;UBERON:0002791,5.94e-08,29;UBERON:0001893,5.94e-08,29;UBERON:0002616,6.89e-08,46;UBERON:0002020,7.07e-08,34;UBERON:0002780,1.08e-07,39;UBERON:0001890,1.08e-07,39;UBERON:0006240,1.08e-07,39;UBERON:0003080,1.24e-07,40;UBERON:0000955,1.73e-07,47;UBERON:0006238,1.73e-07,47;UBERON:0000956,2.67e-07,21;UBERON:0001869,2.67e-07,21;UBERON:0000203,2.67e-07,21;UBERON:0004177,3.08e-07,29;UBERON:0005057,3.08e-07,29;UBERON:0002384,3.56e-07,46;UBERON:0003081,4.25e-07,87;UBERON:0001474,4.63e-07,22;UBERON:0004765,4.63e-07,22;UBERON:0001434,4.63e-07,22;UBERON:0001017,5.69e-07,73;UBERON:0001016,7.36e-07,75;UBERON:0002371,9.34e-07,16 | |||
|phase1_expression=46.1228679661807,3.83872948403297,6.3699893514535,1.51232105653415,2.50447864973174,9.06548068324205,11.2134067485852,95.1638893764417,18.7249000461717,19.8954847373694,11.3003859028833,14.1196721421745,64.3714744541333,68.7998567037509,15.3230490435205,14.1732687172878,6.99561878128147,48.1079802171312,47.9900517620086,40.3170169208129,13.6069264241712,45.9717104060099,45.7099630993137,15.6792574337539,22.0232909824483,10.9104073181854,8.61523992318149,9.04979177280734,5.32065574477847,8.31699428207772,10.199603490144,17.14582818341,11.6862309641068,0,7.51014211353314,8.14549762256613,5.51257261908397,210.102878629928,156.26706890476,178.521596695065,229.998511820127,220.623691641578,243.240686868608,10.0717454380462,9.93493925951243,10.4621648732158,93.8869613217647,23.3286917327078,34.0513583238431,26.053606475954,24.2176509411877,41.6882436658418,29.5297386661616,55.8528849348735,46.7170380808025,16.2073444702647,18.3381401560804,22.6895720602075,24.2779753031517,19.0436752537932,25.9870875437533,60.3143267083055,36.4610866405567,108.437915932409,118.663963508037,140.675062759328,72.2036266349355,59.1696190195194,17.6272340924412,21.3309382564071,21.0324961351382,25.9942395807461,23.8538024227743,17.6386750869534,20.2233943848479,20.2228133054205,19.82085857989,18.7700386985226,19.3544231902867,22.1568963386726,20.4932321669398,18.7528813400434,25.9640189071284,20.2594539611405,19.4053774676549,12.9636577608414,16.0879999302986,14.911955666024,15.3724172466364,14.6608826607164,14.4932244350839,6.88339101585109,0,0.539703191637817,1.29955283489534,1.34408066129201,11.5164424508037,20.9629296771011,28.5764605063156,33.213920003972,32.5348299684132,16.6824420638613,28.028576367731,21.3320010945999,10.6080610095495,8.86759529162845,8.08839112023653,6.73684890342454,36.7691794778984,27.1649114488629,26.7167403219849,21.0081180035377,32.7474006103603,34.3647620459979,21.4011446986983,39.7106428601775,14.8316980640624,9.39895819979426,38.0382537338446,13.2648816956876,17.8881629952919,11.6370060752453,1.86391761218122,13.7606974595427,16.546289838263,8.17462576667492,31.1519323715393,27.5955256256968,38.2481383489925,16.1773890557209,16.0125210986519,18.4711897605911,30.0716073932638,31.9644321662913,19.9476522777178,19.7934340942664,17.2108524907035,18.9098595327341,10.108910337347,4.8401626853889,15.8746940414499,18.1622662502444,13.3245976055958,12.0563854268572,7.34794190834341,7.04625461566674,9.0890672822937,3.62184719034622,16.383167462896,13.0483195315795,19.5305747821983,20.604398848192,15.8486932058591,12.8853301613202,15.6394423670037,19.7043924150308,33.7062329910353,36.0287069960601,42.3403614099433,15.9486844852336,16.6513502586578,16.9258337773354,13.7311946639422,18.6926020160034,15.1181770629631,14.4171045745253,20.1205051049714,13.4280143722245,11.5191894939436,12.8050621981694,9.40398190731926,11.8421989814519,14.7098577245004,12.6154033634749,22.2907345477975,14.818264182617,6.93879444265976,4.23120906661671,20.2623838008472,16.953277045812,13.2733485161756,10.0841762311671,12.6755484991576,14.2669219584419,6.16887780007865,11.5289268306808,8.54539709920916,6.96347652144028,11.307917052909,7.19055526923377,7.5648317456143,3.98282546508734,21.4324728076982,17.0230283788496,15.7790829942313,12.4227309985642,12.8008641530633,9.25792822552205,9.04282480876879,6.19962621514329,5.80895293013087,7.52722699922983,4.15033677922008,8.3422552858047,10.2210677458866,10.1187950573184,7.50582449137461,11.576503668116,13.4951701444152,13.2340223227373,10.0523840600522,9.33508804839477,7.18841032636773,8.18710084870708,7.80094182786401,3.78868316920668,2.69096120282868,2.41221760681684,23.2789019609922,22.3599865889172,17.9261474086228,19.860175035697,16.1936271319066,17.9231695462743,19.9956658344252,15.8058254764817,19.2314875809553,18.6030339304971,23.1209414553356,25.5626770956551,21.9309926969687,20.5401663185746,54.284862218138,120.203156123935,6.39293554924747,9.93372286697037,14.9312048688647,15.003095883802,12.2951209032507,7.06918596172244,7.2566890465739,8.98009111882268,12.2791336707695,11.709471099675,7.79795359288379,10.4738316391868,7.2865926301481,9.64444331107329,9.88219444866309,10.6036034419196,11.071326646245,24.2169220987467,14.1711654637611,14.6823409445557,2.65490276679926,16.2663026223838,14.2092071773433,9.6188590675508,12.4026795009925,9.22305443831782,12.4045580720746,7.63420831902762,8.19943970284859,5.37262488490887,8.4334886859999,3.09406629744561,9.87274856685985,19.0864759673189,23.5432804484613,21.4337035031592,15.6059405605201,17.3017753074008,14.3157647923845,17.0500371504176,19.0084083531605,16.9465656691056,4.6310963591542,6.5954501176592,5.32832608096488,9.77069383836125,6.92359595218192,7.38634048852776,9.61886760878507,16.1320012749143,26.655857404465,32.1963514022627,22.0381487569957,13.9392658183471,15.8565304156389,19.4461447225544,15.4680371294408,19.8731062299594,20.0389962016414,10.5013767981662,22.30168754747,15.2489600345137,14.148699647656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| |||
|short_description=p1@Twf2 | |||
}} |
Latest revision as of 02:42, 26 September 2015
Short description: | p1@Twf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Twf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000024047, NM_011876, uc009rjf.1_5end |
EntrezGene: | Twf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.18e-09 | 54 |
hematopoietic cell | 6.05e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.05e-08 | 32 |
hematopoietic stem cell | 6.05e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.05e-08 | 32 |
connective tissue cell | 3.56e-07 | 46 |
mesenchymal cell | 3.56e-07 | 46 |
leukocyte | 5.86e-07 | 17 |
nongranular leukocyte | 5.86e-07 | 17 |
stem cell | 8.98e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.48e-13 | 48 |
immune system | 2.48e-13 | 48 |
hematopoietic system | 8.59e-13 | 45 |
blood island | 8.59e-13 | 45 |
mesoderm | 1.41e-09 | 120 |
mesoderm-derived structure | 1.41e-09 | 120 |
presumptive mesoderm | 1.41e-09 | 120 |
regional part of nervous system | 2.62e-08 | 54 |
neural tube | 5.59e-08 | 52 |
neural rod | 5.59e-08 | 52 |
future spinal cord | 5.59e-08 | 52 |
neural keel | 5.59e-08 | 52 |
brain grey matter | 5.94e-08 | 29 |
regional part of telencephalon | 5.94e-08 | 29 |
telencephalon | 5.94e-08 | 29 |
regional part of brain | 6.89e-08 | 46 |
gray matter | 7.07e-08 | 34 |
regional part of forebrain | 1.08e-07 | 39 |
forebrain | 1.08e-07 | 39 |
future forebrain | 1.08e-07 | 39 |
anterior neural tube | 1.24e-07 | 40 |
brain | 1.73e-07 | 47 |
future brain | 1.73e-07 | 47 |
cerebral cortex | 2.67e-07 | 21 |
cerebral hemisphere | 2.67e-07 | 21 |
pallium | 2.67e-07 | 21 |
hemopoietic organ | 3.08e-07 | 29 |
immune organ | 3.08e-07 | 29 |
connective tissue | 3.56e-07 | 46 |
lateral plate mesoderm | 4.25e-07 | 87 |
bone element | 4.63e-07 | 22 |
skeletal element | 4.63e-07 | 22 |
skeletal system | 4.63e-07 | 22 |
central nervous system | 5.69e-07 | 73 |
nervous system | 7.36e-07 | 75 |
bone marrow | 9.34e-07 | 16 |