FFCP PHASE1:Mm9::chr9:107877953..107877962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74153 | |EntrezGene=74153 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DBK7 | |UniProt=Q9DBK7 | ||
|association_with_transcript=55bp_to_ENSMUST00000035216,NM_023738,uc009rno.1,uc009rnp.1,uc012han.1_5end | |association_with_transcript=55bp_to_ENSMUST00000035216,NM_023738,uc009rno.1,uc009rnp.1,uc012han.1_5end | ||
|cluster_id=chr9:107877953..107877962,+ | |||
|description=CAGE_peak_7_at_Uba7_5end | |description=CAGE_peak_7_at_Uba7_5end | ||
|id=chr9:107877953..107877962,+ | |id=chr9:107877953..107877962,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.99e-12,2;CL:0000213,7.38e-07,1;CL:0002078,7.38e-07,1;CL:0000115,7.38e-07,1;CL:0002262,7.38e-07,1;CL:1000398,7.38e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.93e-09!70;UBERON:0002193!2.98e-08!48;UBERON:0002390!9.49e-08!45;UBERON:0003061!9.49e-08!45;UBERON:0005057!5.87e-07!51 | |ontology_enrichment_uberon=UBERON:0002405!1.93e-09!70;UBERON:0002193!2.98e-08!48;UBERON:0002390!9.49e-08!45;UBERON:0003061!9.49e-08!45;UBERON:0005057!5.87e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.94e-08,6;UBERON:0004457,1.94e-08,6;UBERON:0000042,1.94e-08,6;UBERON:0004854,1.94e-08,6;UBERON:0009034,1.94e-08,6;UBERON:0002095,1.94e-08,6;UBERON:0004782,1.94e-08,6;UBERON:0003281,1.94e-08,6;UBERON:0009664,1.94e-08,6;UBERON:0002296,1.94e-08,6;UBERON:0005602,1.94e-08,6;UBERON:0001179,1.94e-08,6;UBERON:0006293,1.94e-08,6;UBERON:0002390,2.80e-08,45;UBERON:0003061,2.80e-08,45;UBERON:0002193,1.09e-07,48;UBERON:0002405,1.09e-07,48;UBERON:0002394,7.38e-07,1;UBERON:0001281,7.38e-07,1;UBERON:0000353,7.38e-07,1;UBERON:0003497,7.38e-07,1;UBERON:0003909,7.38e-07,1;UBERON:0003928,7.38e-07,1;UBERON:0003835,7.38e-07,1;UBERON:0003513,7.38e-07,1;UBERON:0001280,7.38e-07,1;UBERON:0004647,7.38e-07,1;UBERON:0002294,7.38e-07,1;UBERON:0001173,7.38e-07,1;UBERON:0004912,7.38e-07,1;UBERON:0005171,7.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0.774739940649458,0.140788722151667,0,0,0,0.513602189793617,1.22388563386596,0.333109761815663,1.21485160433896,0,0.315462165358238,0.685572168028694,0.84877930359606,0.17008658030214,0.595745707205312,1.82839852397255,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,0,0.485510353031154,0,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0,0.419959264876088,0,0.503347818173209,0.725362142011344,0.672187598284928,0.257259436035947,0,0,0,0,0,0,0,0,1.97773272513395,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0.151143120213571,2.89864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.445326417194474,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.628332956648377,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0.958520996047362,0.599902730993408,0.635351135365324,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,0.203678727700633,0.870848794270651,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0.852490498186778,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0,0.528901133327089,0,0,0.257734922644187,0,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0.795825888164603,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.738050739898011,0.31399745568275,0.246794327843601,0.296452627087149,0,0.786235980452812,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.863088412352432,1.29708181420028,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0.8858587585951,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,4.52373851817817,7.07077388964322,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0.534196811001766,0,0,0,0,0,0,0,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,0,0,0,0,0.643011105094777,0.177340233642274,0,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0.341741761595705,0.619160603889667,0.740778109478847,1.88368457004691,1.91371918809435,1.83022538565218,2.20971958992012,2.6590775941495,1.93479963326193,0,0,0,0,0,0,0.269728692769641,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0.632022241256357,0,0.718976700153791,0.909445760844565,0.179026695667481,0.198681354781265,0.600977247599844,0.295379054349154,0.403865799792591,0.914481679859998,0.604957110821043,0.877120926657772,0.384847366561318,1.28564592399726,0,0,0,0,0.386379188064381,0.187682475451182,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.935726433781634,0,0,0,0 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| ||
|short_description=p7@Uba7 | |short_description=p7@Uba7 | ||
}} | }} |
Latest revision as of 03:54, 26 September 2015
Short description: | p7@Uba7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Uba7_5end |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | 55bp_to_ENSMUST00000035216, NM_023738, uc009rno.1, uc009rnp.1, uc012han.1_5end |
EntrezGene: | Uba7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.99e-12 | 2 |
lining cell | 7.38e-07 | 1 |
meso-epithelial cell | 7.38e-07 | 1 |
endothelial cell | 7.38e-07 | 1 |
endothelial cell of sinusoid | 7.38e-07 | 1 |
endothelial cell of hepatic sinusoid | 7.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.94e-08 | 6 |
cavity lining | 1.94e-08 | 6 |
serous membrane | 1.94e-08 | 6 |
gastrointestinal system mesentery | 1.94e-08 | 6 |
stomach region | 1.94e-08 | 6 |
mesentery | 1.94e-08 | 6 |
gastrointestinal system serosa | 1.94e-08 | 6 |
mesentery of stomach | 1.94e-08 | 6 |
gut mesentery | 1.94e-08 | 6 |
dorsal mesentery | 1.94e-08 | 6 |
dorsal mesogastrium | 1.94e-08 | 6 |
peritoneal cavity | 1.94e-08 | 6 |
spleen primordium | 1.94e-08 | 6 |
hematopoietic system | 2.80e-08 | 45 |
blood island | 2.80e-08 | 45 |
hemolymphoid system | 1.09e-07 | 48 |
immune system | 1.09e-07 | 48 |
bile duct | 7.38e-07 | 1 |
hepatic sinusoid | 7.38e-07 | 1 |
parenchyma | 7.38e-07 | 1 |
abdomen blood vessel | 7.38e-07 | 1 |
sinusoid | 7.38e-07 | 1 |
digestive system duct | 7.38e-07 | 1 |
abdominal segment blood vessel | 7.38e-07 | 1 |
trunk blood vessel | 7.38e-07 | 1 |
liver parenchyma | 7.38e-07 | 1 |
liver lobule | 7.38e-07 | 1 |
biliary system | 7.38e-07 | 1 |
biliary tree | 7.38e-07 | 1 |
biliary bud | 7.38e-07 | 1 |
hepatic duct | 7.38e-07 | 1 |