FFCP PHASE1:Mm9::chr9:108419847..108419858,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:108419847..108419858,+
|short_description=p7@Qrich1
|description=CAGE_peak_7_at_Qrich1_5end
|association_with_transcript=-388bp_to_uc009rqf.1_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69232 | |EntrezGene=69232 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-388bp_to_uc009rqf.1_5end | |||
|cluster_id=chr9:108419847..108419858,+ | |||
|description=CAGE_peak_7_at_Qrich1_5end | |||
|id=chr9:108419847..108419858,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.76e-07,13;CL:0000051,4.76e-07,13;CL:0000791,6.78e-07,9;CL:0000789,6.78e-07,9;CL:0002420,6.78e-07,9;CL:0002419,6.78e-07,9;CL:0000790,6.78e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!5.14e-07!147;UBERON:0004177!5.32e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.27e-08,29;UBERON:0005057,2.27e-08,29;UBERON:0006562,3.19e-07,24;UBERON:0001557,3.19e-07,24;UBERON:0001042,3.19e-07,24;UBERON:0008814,3.19e-07,24;UBERON:0009145,3.19e-07,24;UBERON:0002370,4.02e-07,23;UBERON:0000974,4.02e-07,23;UBERON:0004807,4.02e-07,23;UBERON:0005058,4.02e-07,23;UBERON:0003351,4.02e-07,23;UBERON:0009113,4.02e-07,23;UBERON:0003295,4.02e-07,23;UBERON:0009722,4.02e-07,23;UBERON:0005562,4.02e-07,23;UBERON:0007690,4.02e-07,23;UBERON:0003408,4.03e-07,24;UBERON:0000077,6.33e-07,35;UBERON:0001004,9.40e-07,42 | |||
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| ||
|short_description=p7@Qrich1 | |||
}} | }} |
Latest revision as of 04:24, 26 September 2015
Short description: | p7@Qrich1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Qrich1_5end |
Coexpression cluster: | NA |
Association with transcript: | -388bp_to_uc009rqf.1_5end |
EntrezGene: | Qrich1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.76e-07 | 13 |
common lymphoid progenitor | 4.76e-07 | 13 |
mature alpha-beta T cell | 6.78e-07 | 9 |
alpha-beta T cell | 6.78e-07 | 9 |
immature T cell | 6.78e-07 | 9 |
mature T cell | 6.78e-07 | 9 |
immature alpha-beta T cell | 6.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.27e-08 | 29 |
immune organ | 2.27e-08 | 29 |
pharynx | 3.19e-07 | 24 |
upper respiratory tract | 3.19e-07 | 24 |
chordate pharynx | 3.19e-07 | 24 |
pharyngeal arch system | 3.19e-07 | 24 |
pharyngeal region of foregut | 3.19e-07 | 24 |
thymus | 4.02e-07 | 23 |
neck | 4.02e-07 | 23 |
respiratory system epithelium | 4.02e-07 | 23 |
hemolymphoid system gland | 4.02e-07 | 23 |
pharyngeal epithelium | 4.02e-07 | 23 |
thymic region | 4.02e-07 | 23 |
pharyngeal gland | 4.02e-07 | 23 |
entire pharyngeal arch endoderm | 4.02e-07 | 23 |
thymus primordium | 4.02e-07 | 23 |
early pharyngeal endoderm | 4.02e-07 | 23 |
gland of gut | 4.03e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 6.33e-07 | 35 |
respiratory system | 9.40e-07 | 42 |