FFCP PHASE1:Mm9::chr12:100139625..100139682,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:100139625..100139682,-
|short_description=p1@Eml5
|description=CAGE_peak_1_at_Eml5_5end
|association_with_transcript=11bp_to_ENSMUST00000065716,NM_0010811...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=319670 | |EntrezGene=319670 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=927 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BQM8,B2RY88 | |UniProt=Q8BQM8,B2RY88 | ||
|association_with_transcript=11bp_to_ENSMUST00000065716,NM_001081191,uc007orn.1,uc011ypy.1_5end | |||
|cluster_id=chr12:100139625..100139682,- | |||
|description=CAGE_peak_1_at_Eml5_5end | |||
|id=chr12:100139625..100139682,- | |||
|ontology_enrichment_celltype=CL:0000540!1.25e-12!33;CL:0000047!1.25e-12!33;CL:0000031!1.25e-12!33;CL:0000404!1.25e-12!33;CL:0000393!1.30e-07!39;CL:0000211!1.30e-07!39;CL:0000107!2.55e-07!9;CL:0000117!6.18e-07!23;CL:0000337!6.18e-07!23;CL:0000221!8.91e-07!44;CL:0000133!8.91e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.08e-12,33;CL:0000047,1.08e-12,33;CL:0000031,1.08e-12,33;CL:0000404,1.08e-12,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0000107,2.36e-07,9;CL:0000117,5.76e-07,23;CL:0000337,5.76e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.09e-21,73;UBERON:0002346,8.94e-21,64;UBERON:0003075,8.94e-21,64;UBERON:0007284,8.94e-21,64;UBERON:0004121,1.98e-20,95;UBERON:0000924,1.98e-20,95;UBERON:0006601,1.98e-20,95;UBERON:0001016,1.55e-19,75;UBERON:0010314,1.97e-19,92;UBERON:0010371,1.69e-18,73;UBERON:0003056,3.16e-16,49;UBERON:0000073,2.74e-15,54;UBERON:0001049,2.51e-14,52;UBERON:0005068,2.51e-14,52;UBERON:0006241,2.51e-14,52;UBERON:0007135,2.51e-14,52;UBERON:0000955,5.86e-13,47;UBERON:0006238,5.86e-13,47;UBERON:0002616,2.51e-12,46;UBERON:0003080,6.66e-12,40;UBERON:0002780,2.13e-11,39;UBERON:0001890,2.13e-11,39;UBERON:0006240,2.13e-11,39;UBERON:0002020,6.45e-11,34;UBERON:0003528,2.22e-09,29;UBERON:0002791,2.22e-09,29;UBERON:0001893,2.22e-09,29;UBERON:0002410,2.36e-07,9;UBERON:0002021,7.84e-07,10;UBERON:0000411,7.84e-07,10;UBERON:0001950,7.84e-07,10 | |||
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| ||
|short_description=p1@Eml5 | |||
}} | }} |
Latest revision as of 04:25, 26 September 2015
Short description: | p1@Eml5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Eml5_5end |
Coexpression cluster: | MCL_coexpression_mm9:927 |
Association with transcript: | 11bp_to_ENSMUST00000065716, NM_001081191, uc007orn.1, uc011ypy.1_5end |
EntrezGene: | Eml5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.08e-12 | 33 |
neuronal stem cell | 1.08e-12 | 33 |
neuroblast | 1.08e-12 | 33 |
electrically signaling cell | 1.08e-12 | 33 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
autonomic neuron | 2.36e-07 | 9 |
CNS neuron (sensu Vertebrata) | 5.76e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.76e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.09e-21 | 73 |
neurectoderm | 8.94e-21 | 64 |
neural plate | 8.94e-21 | 64 |
presumptive neural plate | 8.94e-21 | 64 |
ectoderm-derived structure | 1.98e-20 | 95 |
ectoderm | 1.98e-20 | 95 |
presumptive ectoderm | 1.98e-20 | 95 |
nervous system | 1.55e-19 | 75 |
structure with developmental contribution from neural crest | 1.97e-19 | 92 |
ecto-epithelium | 1.69e-18 | 73 |
pre-chordal neural plate | 3.16e-16 | 49 |
regional part of nervous system | 2.74e-15 | 54 |
neural tube | 2.51e-14 | 52 |
neural rod | 2.51e-14 | 52 |
future spinal cord | 2.51e-14 | 52 |
neural keel | 2.51e-14 | 52 |
brain | 5.86e-13 | 47 |
future brain | 5.86e-13 | 47 |
regional part of brain | 2.51e-12 | 46 |
anterior neural tube | 6.66e-12 | 40 |
regional part of forebrain | 2.13e-11 | 39 |
forebrain | 2.13e-11 | 39 |
future forebrain | 2.13e-11 | 39 |
gray matter | 6.45e-11 | 34 |
brain grey matter | 2.22e-09 | 29 |
regional part of telencephalon | 2.22e-09 | 29 |
telencephalon | 2.22e-09 | 29 |
autonomic nervous system | 2.36e-07 | 9 |
occipital lobe | 7.84e-07 | 10 |
visual cortex | 7.84e-07 | 10 |
neocortex | 7.84e-07 | 10 |