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FFCP PHASE1:Mm9::chr9:108961730..108961773,-: Difference between revisions

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{{FFCP|EntrezGene=22040|HGNC=|MCL_coexpression_id=67|UniProt=Q91XB0|association_with_transcript=0bp_to_ENSMUST00000112053,NM_001012236_5end|description=CAGE_peak_1_at_Trex1_5end|id=chr9:108961730..108961773,-|ontology_enrichment_celltype=CL:0000219!2.31e-18!54;CL:0002320!2.35e-16!46;CL:0000134!2.35e-16!46;CL:0000063!3.27e-13!66;CL:0000988!1.25e-12!32;CL:0002032!1.25e-12!32;CL:0000037!1.25e-12!32;CL:0000566!1.25e-12!32;CL:0000837!1.25e-12!32;CL:0002031!2.17e-10!25;CL:0000049!1.71e-08!19;CL:0000738!7.21e-08!17;CL:0002087!7.21e-08!17;CL:0000763!6.53e-07!16|ontology_enrichment_celltype_v019_2=CL:0000219,2.04e-18,54;CL:0002320,2.07e-16,46;CL:0000134,2.07e-16,46;CL:0000988,1.11e-12,32;CL:0002032,1.11e-12,32;CL:0000037,1.11e-12,32;CL:0000837,1.11e-12,32;CL:0002031,1.92e-10,25;CL:0000049,1.51e-08,19;CL:0000738,7.18e-08,17;CL:0002087,7.18e-08,17;CL:0000763,5.81e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.35e-16!46;UBERON:0002193!8.30e-14!48;UBERON:0002405!9.95e-14!70;UBERON:0002390!3.33e-12!45;UBERON:0003061!3.33e-12!45;UBERON:0002204!1.65e-11!32;UBERON:0002371!8.94e-10!16;UBERON:0001474!2.29e-08!22;UBERON:0004765!2.29e-08!22;UBERON:0001434!2.29e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.07e-16,46;UBERON:0002193,7.43e-14,48;UBERON:0002405,7.43e-14,48;UBERON:0002390,3.00e-12,45;UBERON:0003061,3.00e-12,45;UBERON:0002204,1.64e-11,32;UBERON:0002371,8.89e-10,16;UBERON:0001474,2.28e-08,22;UBERON:0004765,2.28e-08,22;UBERON:0001434,2.28e-08,22|phase1_expression=6.24580503708696,26.8711063882308,39.1299345875001,7.25914107136392,6.51164448930251,12.0873075776561,21.9595882159794,50.7454661125395,35.901124148675,42.3656792642808,10.9579499664323,15.7948874810766,22.427295620988,19.5821701418554,21.3190247562024,16.6029719259657,8.39474253753776,51.8935262014301,46.0704496915282,37.3462893582267,6.03807360072595,45.0780918452019,37.3515698468678,38.8781587387978,49.0935861483744,25.2662064210609,34.0301976965669,28.8731451799091,11.5914285868388,5.54466285471848,14.8559442139054,19.6859508772486,17.221814052368,0,2.59966457776147,2.49351968037739,2.6542016314108,49.805264057692,63.2881629064278,46.0700894696943,21.7645650571475,23.2235464885872,31.558172947025,14.3522372492158,13.3817549209759,15.6014739337429,63.3736988921912,3.05235218932625,14.4992880604751,16.5265414213141,19.5980990275508,11.5002051491977,42.2812167265496,32.6412963905105,38.9868807005258,14.1492689819771,12.6074713573053,23.2052441524849,0.202316460859598,0,0,35.917520399328,69.3649940966689,226.324778896272,342.147761448173,283.481565863494,80.2928296189325,59.1696190195194,0.207379224616955,0.270011876663381,0,1.71390590642282,3.09215957332259,0.244981598429908,0.0958454710182364,0,4.40463523997555,2.55374676170375,1.99688493233117,0.131886287730194,0.365950574409639,0.52091337055676,4.74611098302348,2.8138130501584,2.59757021220577,0.883885756421003,1.42371680799103,1.3047961207771,26.0498105066153,35.8209194906163,87.8289400766084,16.3480536626463,7.47968467078526,5.39703191637817,7.79731700937203,6.72040330646003,10.5333315098814,15.3387290320252,10.6512261887176,14.8402621294343,3.80277233397037,12.8326477414318,2.54805239706646,0,4.11332977921307,2.78695852022608,2.52762222507392,9.93399753555822,43.5015644527248,17.9614988268438,4.68410382268567,10.0473607843007,8.99400439298628,19.1417753501831,13.0523464920632,8.92232798440696,6.42706916109372,8.38676270135488,21.230653246797,5.50007289821191,10.1587098491781,7.75800405016355,9.31958806090611,1.46390398505774,2.51336048176146,21.9693067479389,43.4928901956491,53.9912457894067,34.3089613097275,1.64769703345305,3.20250421973039,0.753926112677186,5.21472960576829,6.39288643325826,1.66230435647648,1.78465389374533,5.6011650117674,11.9430691785689,6.06534620240819,5.05060454127538,0.650602214813519,3.67843367093557,5.58192602396583,8.28876498096433,12.5867523429957,17.8078071195941,19.1151518101847,17.3331258395141,0.215567992932842,0.189106080167819,0.879755620819744,1.53437012699302,2.50242524303038,3.83077383174383,7.61393904709391,1.39323986772945,53.3682022358058,45.5505795593046,38.362072418405,0.414251545071004,1.40715635988658,1.44049649168812,3.07768156260773,2.55793501271625,0.925602677324269,0.930135779001631,2.68273401399619,2.6856028744449,1.31647879930784,2.29834449710733,3.24275238183423,4.23979963533464,14.9294078397914,5.2340503316545,1.89260953707715,1.9551876352064,14.8688452342709,23.2716498663919,1.49301775374664,1.39342003116263,2.57734922644187,3.63030344322017,4.00280478920767,9.13083005340284,13.2868137232463,10.8701310117847,10.0534083520108,10.9426059622633,7.99352757188393,12.5834717211591,10.8069024937347,11.1519113022446,2.46568271239006,2.17072173958485,1.1270773567308,0.407302655690628,2.71533482034676,1.75339549725796,1.45444035385792,1.91893192373483,4.23896565171712,3.33172342588861,19.2694207606647,2.16898637430922,4.12773889737726,8.31989815823959,6.28866376304359,6.51178331331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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22040
|HGNC=
|MCL_coexpression_id=67
|TSSclassifier=NA
|UniProt=Q91XB0
|association_with_transcript=0bp_to_ENSMUST00000112053,NM_001012236_5end
|cluster_id=chr9:108961730..108961773,-
|description=CAGE_peak_1_at_Trex1_5end
|id=chr9:108961730..108961773,-
|ontology_enrichment_celltype=CL:0000219!2.31e-18!54;CL:0002320!2.35e-16!46;CL:0000134!2.35e-16!46;CL:0000063!3.27e-13!66;CL:0000988!1.25e-12!32;CL:0002032!1.25e-12!32;CL:0000037!1.25e-12!32;CL:0000566!1.25e-12!32;CL:0000837!1.25e-12!32;CL:0002031!2.17e-10!25;CL:0000049!1.71e-08!19;CL:0000738!7.21e-08!17;CL:0002087!7.21e-08!17;CL:0000763!6.53e-07!16
|ontology_enrichment_celltype_v019_2=CL:0000219,2.04e-18,54;CL:0002320,2.07e-16,46;CL:0000134,2.07e-16,46;CL:0000988,1.11e-12,32;CL:0002032,1.11e-12,32;CL:0000037,1.11e-12,32;CL:0000837,1.11e-12,32;CL:0002031,1.92e-10,25;CL:0000049,1.51e-08,19;CL:0000738,7.18e-08,17;CL:0002087,7.18e-08,17;CL:0000763,5.81e-07,16
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.07e-16,46;UBERON:0002193,7.43e-14,48;UBERON:0002405,7.43e-14,48;UBERON:0002390,3.00e-12,45;UBERON:0003061,3.00e-12,45;UBERON:0002204,1.64e-11,32;UBERON:0002371,8.89e-10,16;UBERON:0001474,2.28e-08,22;UBERON:0004765,2.28e-08,22;UBERON:0001434,2.28e-08,22
|phase1_expression=6.24580503708696,26.8711063882308,39.1299345875001,7.25914107136392,6.51164448930251,12.0873075776561,21.9595882159794,50.7454661125395,35.901124148675,42.3656792642808,10.9579499664323,15.7948874810766,22.427295620988,19.5821701418554,21.3190247562024,16.6029719259657,8.39474253753776,51.8935262014301,46.0704496915282,37.3462893582267,6.03807360072595,45.0780918452019,37.3515698468678,38.8781587387978,49.0935861483744,25.2662064210609,34.0301976965669,28.8731451799091,11.5914285868388,5.54466285471848,14.8559442139054,19.6859508772486,17.221814052368,0,2.59966457776147,2.49351968037739,2.6542016314108,49.805264057692,63.2881629064278,46.0700894696943,21.7645650571475,23.2235464885872,31.558172947025,14.3522372492158,13.3817549209759,15.6014739337429,63.3736988921912,3.05235218932625,14.4992880604751,16.5265414213141,19.5980990275508,11.5002051491977,42.2812167265496,32.6412963905105,38.9868807005258,14.1492689819771,12.6074713573053,23.2052441524849,0.202316460859598,0,0,35.917520399328,69.3649940966689,226.324778896272,342.147761448173,283.481565863494,80.2928296189325,59.1696190195194,0.207379224616955,0.270011876663381,0,1.71390590642282,3.09215957332259,0.244981598429908,0.0958454710182364,0,4.40463523997555,2.55374676170375,1.99688493233117,0.131886287730194,0.365950574409639,0.52091337055676,4.74611098302348,2.8138130501584,2.59757021220577,0.883885756421003,1.42371680799103,1.3047961207771,26.0498105066153,35.8209194906163,87.8289400766084,16.3480536626463,7.47968467078526,5.39703191637817,7.79731700937203,6.72040330646003,10.5333315098814,15.3387290320252,10.6512261887176,14.8402621294343,3.80277233397037,12.8326477414318,2.54805239706646,0,4.11332977921307,2.78695852022608,2.52762222507392,9.93399753555822,43.5015644527248,17.9614988268438,4.68410382268567,10.0473607843007,8.99400439298628,19.1417753501831,13.0523464920632,8.92232798440696,6.42706916109372,8.38676270135488,21.230653246797,5.50007289821191,10.1587098491781,7.75800405016355,9.31958806090611,1.46390398505774,2.51336048176146,21.9693067479389,43.4928901956491,53.9912457894067,34.3089613097275,1.64769703345305,3.20250421973039,0.753926112677186,5.21472960576829,6.39288643325826,1.66230435647648,1.78465389374533,5.6011650117674,11.9430691785689,6.06534620240819,5.05060454127538,0.650602214813519,3.67843367093557,5.58192602396583,8.28876498096433,12.5867523429957,17.8078071195941,19.1151518101847,17.3331258395141,0.215567992932842,0.189106080167819,0.879755620819744,1.53437012699302,2.50242524303038,3.83077383174383,7.61393904709391,1.39323986772945,53.3682022358058,45.5505795593046,38.362072418405,0.414251545071004,1.40715635988658,1.44049649168812,3.07768156260773,2.55793501271625,0.925602677324269,0.930135779001631,2.68273401399619,2.6856028744449,1.31647879930784,2.29834449710733,3.24275238183423,4.23979963533464,14.9294078397914,5.2340503316545,1.89260953707715,1.9551876352064,14.8688452342709,23.2716498663919,1.49301775374664,1.39342003116263,2.57734922644187,3.63030344322017,4.00280478920767,9.13083005340284,13.2868137232463,10.8701310117847,10.0534083520108,10.9426059622633,7.99352757188393,12.5834717211591,10.8069024937347,11.1519113022446,2.46568271239006,2.17072173958485,1.1270773567308,0.407302655690628,2.71533482034676,1.75339549725796,1.45444035385792,1.91893192373483,4.23896565171712,3.33172342588861,19.2694207606647,2.16898637430922,4.12773889737726,8.31989815823959,6.28866376304359,6.51178331331525,6.87489799809833,16.3986798346962,9.24170792617702,14.0026320725922,10.0637744569148,22.3284568601102,9.36113019343682,7.57736633841335,5.74071723270119,6.27176577772377,27.3434721446575,1.13694847062291,2.28150967018836,2.03694102930226,1.17345124144251,2.01007508930179,8.09348379012447,8.58588050574315,5.35959489961049,5.75808193086815,4.9430978283821,14.2561083802692,16.2323882953942,11.7165737451024,226.186925908908,508.007908686675,10.8188140064188,14.0727740615414,2.72936002979246,2.46144541843627,12.7869257393807,11.6136626514012,2.83957397474631,3.12350995437311,3.87762115919038,4.30143836314594,5.34716817797746,5.09537755419898,4.45291771842384,4.9683495844923,3.95287777946523,1.28528526568723,7.52282451603824,6.7664929393557,6.02681749608232,14.5173708215831,2.65490276679926,4.12727081463468,3.32555912661226,2.07465587731488,6.496641643377,7.99331384654211,13.4382712447475,7.63420831902762,7.12994756769443,4.42451461110142,8.4334886859999,4.12542172992747,3.06395645178409,0.900305470156551,2.8458910432206,2.7863814554107,2.48276327099183,3.0322698992352,3.29098041204242,7.30715877875038,15.0189893160775,6.99045833850607,4.85162475720916,10.8824926941377,11.6254387221052,5.48847616846218,6.44610657616937,6.56563598980245,9.91034844541493,2.41052892613663,33.661563517177,13.4151464176095,27.9643736328265,17.706634958441,18.7271091977804,21.7339264546196,54.7330544580214,56.2604838341105,52.6541900194855,23.8667654503778,1.26534397432454,2.03319467126849,2.05210147561422,1.67270636811575,4.58561383866973,4.72025212346872,6.61227645802687,8.11443420150492,7.2584385043404,15.5334828271731,2.25477175473676,1.94371509857172,1.15820943319968,1.94451188344048,3.22899558694328,3.04121025883401,3.28600268208111,1.43224823328345,1.46803082195995,3.14059357073808,2.59227005632079,20.5407228408316,9.93353554921804,8.93585327333997,10.0039033692902,11.0996551313838,10.1327490938445,11.7791540529569,10.3382669022204,8.98601404538514,8.83998957197998,8.16692099608408,10.622909000633,9.62118416403295,12.2720747290647,17.4582395383713,3.32978930061097,3.05027112472217,8.39423081820392,10.2390484837061,21.5834846768859,19.9635270451319,18.4356806007997,14.5455910170255,1.6942555278512,2.30162618253588,3.43737308063638,1.71853182343688,6.16574267793578,5.2877572817279,8.10027000278167,4.95353323546643,5.89085131679466,6.21312374102184,0.31136204275253,1.19707462020309,2.39027048055788,5.10524105843418,3.14419743941973,3.67687016900028,3.11145418922261,4.32673620201678,6.09746498224449,3.03236654116557,5.32306529769503,3.39527414494937,2.99652823903624,2.81710670581425,3.84817642002609,1.42888107384922,3.94006708212509,2.12200142510076,3.70877310722976,4.26876868389752,2.05721551431249,4.2594193478241,3.09967046931517,4.21504608233753,3.67026583619789,4.48457421825885,3.29270351170991,2.63069711437843,3.25929873230068,4.48913817326191,3.08451047122853,3.74317033027141,3.6830793885272,4.33823155320705,3.66522560864169,5.74564329257276,10.7608539884888,14.1814895671877,10.9034349279241,11.9119366324538,7.65163857547391
|short_description=p1@Trex1
}}

Latest revision as of 04:53, 26 September 2015

Short description:p1@Trex1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trex1_5end
Coexpression cluster:MCL_coexpression_mm9:67
Association with transcript: 0bp_to_ENSMUST00000112053, NM_001012236_5end
EntrezGene:Trex1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trex1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I639.13
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.96
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E950.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E735.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F242.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.79
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.43
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.60
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A251.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A446.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A637.35
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H245.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I937.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D138.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D249.09
GP2+ M cell, pool1.CNhs13228.11845-124H925.27
GP2+ M cell, pool2.CNhs13231.11846-124I134.03
GP2+ M cell, pool3.CNhs13240.11847-124I228.87
Ileum epithelium, pool1.CNhs13199.10252-104B911.59
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G849.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H163.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H346.07
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H431.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.60
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B763.37
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.28
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I932.64
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A138.99
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.21
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C635.92
Mouse Meningeal cells, donor3.CNhs12109.11639-122D169.36
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7226.32
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7342.15
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2283.48
Mouse Microglia, donor1.CNhs12629.11718-123C880.29
Mouse Microglia, donor2.CNhs12634.11736-123E859.17
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D926.05
Mouse Schwann, donor2.CNhs12573.11746-123F935.82
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G387.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.84
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.93
accessory axillary lymph node, adult.CNhs10475.1063-29H943.50
adrenal gland, adult.CNhs10508.49-24D717.96
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F519.14
adrenal gland, neonate N00.CNhs11191.1311-23C113.05
adrenal gland, neonate N25.CNhs11223.1377-27I38.92
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H18.39
bone (os femoris), adult.CNhs10483.56-12G221.23
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H721.97
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C743.49
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D153.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D434.31
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.94
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C612.59
eyeball, neonate N01.CNhs11140.1532-43E717.81
eyeball, neonate N02.CNhs11205.1551-44G819.12
eyeball, neonate N16.CNhs11188.777-19A217.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B57.61
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C853.37
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D245.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D538.36
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D314.93
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I314.87
intestine, adult.CNhs10496.178-9A323.27
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F79.13
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F210.94
intestine, neonate N10.CNhs11098.755-23A57.99
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B219.27
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A36.87
liver, embryo E18.CNhs10579.499-43G416.40
liver, neonate N00.CNhs11117.641-24F49.24
liver, neonate N03.CNhs11123.1345-25G214.00
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B127.34
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A414.26
lung, neonate N25.CNhs11119.1359-25C716.23
lung, neonate N30.CNhs11133.1394-42H211.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1226.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1508.01
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H214.07
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I77.52
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G614.52
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G913.44
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I715.02
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C310.88
skin, neonate N00.CNhs11124.650-25G411.63
skin, neonate N03.CNhs11215.662-22H35.49
skin, neonate N06.CNhs11097.693-20I56.45
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G233.66
spleen, embryo E16.CNhs11035.461-43C113.42
spleen, embryo E18.CNhs11011.1271-21F227.96
spleen, neonate N10.CNhs11116.752-24D117.71
spleen, neonate N20.CNhs11112.824-19H118.73
spleen, neonate N25.CNhs11099.1354-25G321.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C654.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C956.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D352.65
stomach, adult.CNhs10503.33-1H623.87
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.72
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I17.26
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B520.54
thymus, embryo E14.CNhs11041.402-44I49.93
thymus, embryo E15.CNhs11005.430-45I28.94
thymus, embryo E16.CNhs11002.456-26C510.00
thymus, embryo E17.CNhs10581.478-18C111.10
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F811.78
thymus, neonate N03.CNhs11137.2104-43C710.34
thymus, neonate N06.CNhs11197.681-26C48.99
thymus, neonate N07.CNhs11211.713-19D38.84
thymus, neonate N10.CNhs11194.748-24E48.17
thymus, neonate N20.CNhs11186.820-7A210.62
thymus, neonate N25.CNhs11125.1362-25G79.62
thymus, neonate N30.CNhs11132.1393-42G212.27
tongue, adult.CNhs10499.32-1B417.46
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.39
urinary bladder, adult.CNhs10481.879-12E410.24
uterus, adult pregnant day19.CNhs10497.590-15F521.58
uterus, adult.CNhs10509.92-27E519.96
vagina, adult.CNhs10502.89-27D518.44
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C214.18
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B47.65





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
connective tissue2.07e-1646
hemolymphoid system7.43e-1448
immune system7.43e-1448
hematopoietic system3.00e-1245
blood island3.00e-1245
musculoskeletal system1.64e-1132
bone marrow8.89e-1016
bone element2.28e-0822
skeletal element2.28e-0822
skeletal system2.28e-0822
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