FFCP PHASE1:Mm9::chr17:29484698..29484737,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56462 | |EntrezGene=56462 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1536 | |||
|TSSclassifier=NA | |||
|UniProt=E9QAS0 | |UniProt=E9QAS0 | ||
|association_with_transcript=0bp_to_ENSMUST00000114693_5end | |association_with_transcript=0bp_to_ENSMUST00000114693_5end | ||
|cluster_id=chr17:29484698..29484737,- | |||
|description=CAGE_peak_1_at_Mtch1_5end | |description=CAGE_peak_1_at_Mtch1_5end | ||
|id=chr17:29484698..29484737,- | |id=chr17:29484698..29484737,- | ||
|ontology_enrichment_celltype=CL:0000055!6.70e-24!50;CL:0000221!5.37e-22!44;CL:0000133!5.37e-22!44;CL:0002319!2.19e-21!43;CL:0002321!4.36e-20!70;CL:0000220!4.36e-20!70;CL:0000393!1.54e-19!39;CL:0000211!1.54e-19!39;CL:0000540!4.14e-17!33;CL:0000047!4.14e-17!33;CL:0000031!4.14e-17!33;CL:0000404!4.14e-17!33;CL:0000117!1.77e-13!23;CL:0000337!1.77e-13!23 | |ontology_enrichment_celltype=CL:0000055!6.70e-24!50;CL:0000221!5.37e-22!44;CL:0000133!5.37e-22!44;CL:0002319!2.19e-21!43;CL:0002321!4.36e-20!70;CL:0000220!4.36e-20!70;CL:0000393!1.54e-19!39;CL:0000211!1.54e-19!39;CL:0000540!4.14e-17!33;CL:0000047!4.14e-17!33;CL:0000031!4.14e-17!33;CL:0000404!4.14e-17!33;CL:0000117!1.77e-13!23;CL:0000337!1.77e-13!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.37e-22,44;CL:0000133,5.37e-22,44;CL:0002319,2.19e-21,43;CL:0002321,4.36e-20,70;CL:0000393,1.54e-19,39;CL:0000211,1.54e-19,39;CL:0000540,4.14e-17,33;CL:0000047,4.14e-17,33;CL:0000031,4.14e-17,33;CL:0000404,4.14e-17,33;CL:0000117,1.77e-13,23;CL:0000337,1.77e-13,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-26!73;UBERON:0005743!1.25e-26!73;UBERON:0000073!6.88e-26!75;UBERON:0001016!6.88e-26!75;UBERON:0004121!1.25e-18!102;UBERON:0000924!1.25e-18!102;UBERON:0006601!1.25e-18!102;UBERON:0001049!6.90e-17!52;UBERON:0005068!6.90e-17!52;UBERON:0006241!6.90e-17!52;UBERON:0007135!6.90e-17!52;UBERON:0002616!9.29e-15!49;UBERON:0002346!1.39e-14!71;UBERON:0003075!1.39e-14!71;UBERON:0007284!1.39e-14!71;UBERON:0000955!1.70e-14!50;UBERON:0006238!1.70e-14!50;UBERON:0003080!3.36e-13!40;UBERON:0002780!7.30e-13!39;UBERON:0001890!7.30e-13!39;UBERON:0006240!7.30e-13!39;UBERON:0000033!7.52e-13!63;UBERON:0002020!9.05e-13!34;UBERON:0003056!1.17e-11!49;UBERON:0000025!3.00e-10!114;UBERON:0002791!5.70e-10!29;UBERON:0003528!5.70e-10!29;UBERON:0001893!5.70e-10!29;UBERON:0004111!2.35e-09!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.25e-26,73;UBERON:0001016,6.88e-26,75;UBERON:0004121,3.05e-20,95;UBERON:0000924,3.05e-20,95;UBERON:0006601,3.05e-20,95;UBERON:0000073,1.10e-17,54;UBERON:0010314,3.39e-17,92;UBERON:0001049,6.90e-17,52;UBERON:0005068,6.90e-17,52;UBERON:0006241,6.90e-17,52;UBERON:0007135,6.90e-17,52;UBERON:0002346,1.65e-16,64;UBERON:0003075,1.65e-16,64;UBERON:0007284,1.65e-16,64;UBERON:0010371,1.35e-14,73;UBERON:0002616,8.54e-14,46;UBERON:0000955,1.56e-13,47;UBERON:0006238,1.56e-13,47;UBERON:0003080,3.36e-13,40;UBERON:0002780,7.30e-13,39;UBERON:0001890,7.30e-13,39;UBERON:0006240,7.30e-13,39;UBERON:0002020,9.05e-13,34;UBERON:0003056,1.17e-11,49;UBERON:0000025,3.00e-10,114;UBERON:0003528,5.70e-10,29;UBERON:0002791,5.70e-10,29;UBERON:0001893,5.70e-10,29;UBERON:0004111,2.35e-09,122 | |||
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| ||
|short_description=p1@Mtch1 | |short_description=p1@Mtch1 | ||
}} | }} |
Latest revision as of 05:00, 26 September 2015
Short description: | p1@Mtch1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mtch1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1536 |
Association with transcript: | 0bp_to_ENSMUST00000114693_5end |
EntrezGene: | Mtch1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.37e-22 | 44 |
neurectodermal cell | 5.37e-22 | 44 |
neural cell | 2.19e-21 | 43 |
embryonic cell | 4.36e-20 | 70 |
electrically responsive cell | 1.54e-19 | 39 |
electrically active cell | 1.54e-19 | 39 |
neuron | 4.14e-17 | 33 |
neuronal stem cell | 4.14e-17 | 33 |
neuroblast | 4.14e-17 | 33 |
electrically signaling cell | 4.14e-17 | 33 |
CNS neuron (sensu Vertebrata) | 1.77e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.25e-26 | 73 |
nervous system | 6.88e-26 | 75 |
ectoderm-derived structure | 3.05e-20 | 95 |
ectoderm | 3.05e-20 | 95 |
presumptive ectoderm | 3.05e-20 | 95 |
regional part of nervous system | 1.10e-17 | 54 |
structure with developmental contribution from neural crest | 3.39e-17 | 92 |
neural tube | 6.90e-17 | 52 |
neural rod | 6.90e-17 | 52 |
future spinal cord | 6.90e-17 | 52 |
neural keel | 6.90e-17 | 52 |
neurectoderm | 1.65e-16 | 64 |
neural plate | 1.65e-16 | 64 |
presumptive neural plate | 1.65e-16 | 64 |
ecto-epithelium | 1.35e-14 | 73 |
regional part of brain | 8.54e-14 | 46 |
brain | 1.56e-13 | 47 |
future brain | 1.56e-13 | 47 |
anterior neural tube | 3.36e-13 | 40 |
regional part of forebrain | 7.30e-13 | 39 |
forebrain | 7.30e-13 | 39 |
future forebrain | 7.30e-13 | 39 |
gray matter | 9.05e-13 | 34 |
pre-chordal neural plate | 1.17e-11 | 49 |
tube | 3.00e-10 | 114 |
brain grey matter | 5.70e-10 | 29 |
regional part of telencephalon | 5.70e-10 | 29 |
telencephalon | 5.70e-10 | 29 |
anatomical conduit | 2.35e-09 | 122 |