FFCP PHASE1:Mm9::chr17:29627720..29627744,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18712 | |EntrezGene=18712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1158 | |||
|TSSclassifier=NA | |||
|UniProt=F6XDQ5 | |UniProt=F6XDQ5 | ||
|association_with_transcript=-12bp_to_ENSMUST00000024811_5end | |association_with_transcript=-12bp_to_ENSMUST00000024811_5end | ||
|cluster_id=chr17:29627720..29627744,+ | |||
|description=CAGE_peak_1_at_Pim1_5end | |description=CAGE_peak_1_at_Pim1_5end | ||
|id=chr17:29627720..29627744,+ | |id=chr17:29627720..29627744,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.00e-13!32;CL:0002032!3.00e-13!32;CL:0000037!3.00e-13!32;CL:0000566!3.00e-13!32;CL:0000837!3.00e-13!32;CL:0000063!4.30e-13!66;CL:0002320!2.10e-12!46;CL:0000134!2.10e-12!46;CL:0002031!1.41e-10!25;CL:0000219!1.09e-09!54;CL:0000838!2.80e-08!12;CL:0000542!1.14e-07!13;CL:0000051!1.14e-07!13;CL:0000084!1.22e-07!11;CL:0000827!1.22e-07!11;CL:0000738!1.88e-07!17;CL:0002087!1.88e-07!17;CL:0000049!5.78e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.00e-13,32;CL:0002032,3.00e-13,32;CL:0000037,3.00e-13,32;CL:0000837,3.00e-13,32;CL:0002320,2.10e-12,46;CL:0000134,2.10e-12,46;CL:0002031,1.41e-10,25;CL:0000219,1.09e-09,54;CL:0000838,2.80e-08,12;CL:0000542,1.14e-07,13;CL:0000051,1.14e-07,13;CL:0000084,1.22e-07,11;CL:0000827,1.22e-07,11;CL:0000738,1.88e-07,17;CL:0002087,1.88e-07,17;CL:0000049,5.78e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.30e-14!70;UBERON:0002384!2.10e-12!46;UBERON:0002193!4.26e-10!48;UBERON:0002390!6.68e-10!45;UBERON:0003061!6.68e-10!45;UBERON:0005057!3.13e-09!51;UBERON:0003081!2.61e-08!88;UBERON:0003929!4.02e-08!55;UBERON:0000490!5.72e-08!66;UBERON:0005911!9.06e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.10e-12,46;UBERON:0002193,4.26e-10,48;UBERON:0002405,4.26e-10,48;UBERON:0002390,6.67e-10,45;UBERON:0003061,6.67e-10,45;UBERON:0003081,1.53e-08,87;UBERON:0004119,3.30e-08,118;UBERON:0000925,3.30e-08,118;UBERON:0006595,3.30e-08,118;UBERON:0003929,4.01e-08,55;UBERON:0000490,5.71e-08,66;UBERON:0001007,1.35e-07,116;UBERON:0001555,1.35e-07,116;UBERON:0007026,1.35e-07,116;UBERON:0004921,4.13e-07,114;UBERON:0005911,9.06e-07,69 | |||
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| ||
|short_description=p1@Pim1 | |short_description=p1@Pim1 | ||
}} | }} |
Latest revision as of 05:10, 26 September 2015
Short description: | p1@Pim1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pim1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1158 |
Association with transcript: | -12bp_to_ENSMUST00000024811_5end |
EntrezGene: | Pim1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.00e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.00e-13 | 32 |
hematopoietic stem cell | 3.00e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.00e-13 | 32 |
connective tissue cell | 2.10e-12 | 46 |
mesenchymal cell | 2.10e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 1.41e-10 | 25 |
motile cell | 1.09e-09 | 54 |
lymphoid lineage restricted progenitor cell | 2.80e-08 | 12 |
lymphocyte | 1.14e-07 | 13 |
common lymphoid progenitor | 1.14e-07 | 13 |
T cell | 1.22e-07 | 11 |
pro-T cell | 1.22e-07 | 11 |
leukocyte | 1.88e-07 | 17 |
nongranular leukocyte | 1.88e-07 | 17 |
common myeloid progenitor | 5.78e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.10e-12 | 46 |
hemolymphoid system | 4.26e-10 | 48 |
immune system | 4.26e-10 | 48 |
hematopoietic system | 6.67e-10 | 45 |
blood island | 6.67e-10 | 45 |
lateral plate mesoderm | 1.53e-08 | 87 |
endoderm-derived structure | 3.30e-08 | 118 |
endoderm | 3.30e-08 | 118 |
presumptive endoderm | 3.30e-08 | 118 |
gut epithelium | 4.01e-08 | 55 |
unilaminar epithelium | 5.71e-08 | 66 |
digestive system | 1.35e-07 | 116 |
digestive tract | 1.35e-07 | 116 |
primitive gut | 1.35e-07 | 116 |
subdivision of digestive tract | 4.13e-07 | 114 |
endo-epithelium | 9.06e-07 | 69 |