FFCP PHASE1:Mm9::chr4:116550032..116550058,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:116550032..116550058,+ to FFCP PHASE1:Mm9::chr4:116550032..116550058,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74464 | |EntrezGene=74464 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=295 | |||
|TSSclassifier=NA | |||
|UniProt=A2AGE6,Q80TC6 | |UniProt=A2AGE6,Q80TC6 | ||
|association_with_transcript=25bp_to_NM_001029912,uc008uhq.1_5end | |||
|cluster_id=chr4:116550032..116550058,+ | |||
|description=CAGE_peak_1_at_Zswim5_5end | |||
|id=chr4:116550032..116550058,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.44e-13!33;CL:0000047!2.44e-13!33;CL:0000031!2.44e-13!33;CL:0000404!2.44e-13!33;CL:0000117!5.88e-12!23;CL:0000337!5.88e-12!23;CL:0000221!6.37e-09!44;CL:0000133!6.37e-09!44;CL:0002319!1.64e-08!43;CL:0000393!2.68e-08!39;CL:0000211!2.68e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.10e-15,33;CL:0000047,3.10e-15,33;CL:0000031,3.10e-15,33;CL:0000404,3.10e-15,33;CL:0000117,1.78e-13,23;CL:0000337,1.78e-13,23;CL:0000393,6.62e-11,39;CL:0000211,6.62e-11,39;CL:0000221,2.92e-09,44;CL:0000133,2.92e-09,44;CL:0002319,8.73e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.66e-20!71;UBERON:0003075!1.66e-20!71;UBERON:0007284!1.66e-20!71;UBERON:0001017!2.50e-19!73;UBERON:0005743!2.50e-19!73;UBERON:0000073!8.34e-19!75;UBERON:0001016!8.34e-19!75;UBERON:0000033!1.96e-18!63;UBERON:0003056!7.13e-18!49;UBERON:0004121!1.23e-17!102;UBERON:0000924!1.23e-17!102;UBERON:0006601!1.23e-17!102;UBERON:0001049!1.60e-15!52;UBERON:0005068!1.60e-15!52;UBERON:0006241!1.60e-15!52;UBERON:0007135!1.60e-15!52;UBERON:0000955!1.37e-14!50;UBERON:0006238!1.37e-14!50;UBERON:0002616!5.59e-14!49;UBERON:0003080!2.77e-13!40;UBERON:0002780!4.75e-13!39;UBERON:0001890!4.75e-13!39;UBERON:0006240!4.75e-13!39;UBERON:0002020!5.42e-11!34;UBERON:0002791!5.57e-09!29;UBERON:0003528!5.57e-09!29;UBERON:0001893!5.57e-09!29;UBERON:0007811!2.64e-08!86;UBERON:0000153!2.51e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.93e-23,64;UBERON:0003075,2.93e-23,64;UBERON:0007284,2.93e-23,64;UBERON:0001017,2.59e-21,73;UBERON:0004121,1.21e-20,95;UBERON:0000924,1.21e-20,95;UBERON:0006601,1.21e-20,95;UBERON:0001016,4.40e-20,75;UBERON:0010371,8.77e-20,73;UBERON:0003056,1.10e-19,49;UBERON:0000073,6.79e-18,54;UBERON:0001049,3.80e-17,52;UBERON:0005068,3.80e-17,52;UBERON:0006241,3.80e-17,52;UBERON:0007135,3.80e-17,52;UBERON:0000955,5.78e-15,47;UBERON:0006238,5.78e-15,47;UBERON:0002616,2.99e-14,46;UBERON:0003080,3.18e-14,40;UBERON:0002780,6.13e-14,39;UBERON:0001890,6.13e-14,39;UBERON:0006240,6.13e-14,39;UBERON:0010314,2.27e-13,92;UBERON:0002020,1.70e-11,34;UBERON:0003528,3.99e-09,29;UBERON:0002791,3.99e-09,29;UBERON:0001893,3.99e-09,29 | |||
|phase1_expression=3.68342348341026,6.63053274514786,5.45999087267443,10.5862473957391,9.5170188689806,1.34303417529512,0.467225281191051,0,1.12630977721333,0.70219357896598,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0.137114433605739,0,2.12608225377674,0,0,0.47997726838022,1.14704640533585,5.16808767703518,1.29228598847722,1.50829862880122,1.71021077510736,1.51218077855958,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0.725362142011344,0.672187598284928,0,0,0,11.5320382689971,12.6957835025288,8.87363964908651,0,0,0,0,0,0.299600110518405,0.384218305321555,11.8206158031665,9.72042755988173,9.88527318351495,1.71390590642282,2.65042249141936,18.1286382838132,21.3735400370667,16.5459381589804,4.40463523997555,1.40456071893706,2.30409799884365,16.7495585417346,14.9124859071928,15.106487746146,0.837548997004143,1.68828783009504,1.83357897332172,3.83017161115768,4.41352210477219,11.3703661953433,0.454357159999104,0.453429360640713,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,4.50698943285378,0,0,0,0,0,0,1.1418387971906,0,0.593768556259299,1.90833859442749,1.52232739156071,0.691846491768175,0.753613202763113,1.17588707135705,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0,0,0,3.22058876712702,3.35114730901528,2.29911349687732,0,0,0,1.79748767285787,5.03250663100489,15.2041766056566,1.73824320192276,1.79000820131231,2.70124457927428,3.56930778749067,0.712875546952214,0.497627882440372,1.26361379216837,1.05220927943237,8.32770834961304,7.81667155073808,6.84236093260327,7.53524089178575,8.70867189136997,8.45550553880009,9.27647073141315,5.69147415625834,1.5089759505299,0.945530400839096,1.58356011747554,0.219195732427575,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,1.62055855314913,0.473489471170421,0.196764231747404,0.617068451549513,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,3.15434922846191,8.23236899034275,5.94753809370836,1.32225283331772,0.853153002140936,1.39342003116263,1.28867461322093,0.80673409849337,0.667134131534611,0.760902504450237,0.949058123089023,0.658795818896044,0.251335208800269,1.39269530428806,1.16978452271472,2.69645822596266,1.72910439899755,1.39398891278057,0.569003702859245,1.02823661348756,1.1270773567308,1.22190796707189,1.55161989734101,1.1221731182451,1.51767689098217,1.62371162777562,1.72698600625512,1.35736880313981,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.757965647081939,0.977789858652155,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.472905432318573,0.221464689648775,0.637819074629948,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,1.76605648986571,1.40654023910644,0,0.252470927204373,1.57754109708128,1.17131623288992,1.72338718186239,1.19484398976276,1.11399337041197,2.83076530788832,1.21443210502468,2.33804686329049,3.16230222357219,10.2822821254978,0.709700426041343,2.31485284767432,2.11753047159649,0,0,0.728341908464944,1.51161778482376,0.754420319023592,0.295301892880773,0,0,0.727067458955011,0,0,0,0,2.04263763452273,7.38250485528372,6.59729287292048,5.35842587578981,6.0295679438373,4.63758925765383,3.1264313914403,1.522324745573,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,1.7488850197791,2.03967832211561,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,1.42351197111511,0.813277868507395,0.648032044930808,0.836353184057875,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.518459893167171,0,1.69107881605257,0.448549638131936,0.165458490457098,2.33341426012857,2.45403664607689,1.35164900392623,1.29092962510329,3.25510962109875,8.91304427618542,5.55643477899814,2.88030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0,0.302478555410522,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0,1.6942555278512,1.84130094602871,0.572895513439397,1.03111909406213,3.42541259885321,0.755393897389701,3.37511250115903,3.60256962579376,1.35942722695261,1.03552062350364,5.50072942196136,7.98049746802062,6.82934423016537,2.91728060481953,2.30574478890781,2.02227859295016,2.00022055021454,1.85431551515005,0.64183841918363,1.26348605881899,2.78827229879264,2.82939512079114,1.591905626988,1.6646539625266,2.12511235135769,1.42888107384922,2.0859178670074,1.35036454324594,0.412085900803307,2.20798380201596,2.05721551431249,1.4198064492747,2.38436189947321,1.16277133305863,1.59985946706062,1.77690676572521,1.82927972872773,1.8414879800649,1.22223702461276,2.24456908663095,2.49133538060766,0.985044823755635,2.04615521584845,1.70430525304563,0.578719832943424,4.99621155875892,1.63752125911786,0.644613162144895,0.382576664137687,0.220591419119515,0.463735671240843 | |phase1_expression=3.68342348341026,6.63053274514786,5.45999087267443,10.5862473957391,9.5170188689806,1.34303417529512,0.467225281191051,0,1.12630977721333,0.70219357896598,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0.137114433605739,0,2.12608225377674,0,0,0.47997726838022,1.14704640533585,5.16808767703518,1.29228598847722,1.50829862880122,1.71021077510736,1.51218077855958,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0.725362142011344,0.672187598284928,0,0,0,11.5320382689971,12.6957835025288,8.87363964908651,0,0,0,0,0,0.299600110518405,0.384218305321555,11.8206158031665,9.72042755988173,9.88527318351495,1.71390590642282,2.65042249141936,18.1286382838132,21.3735400370667,16.5459381589804,4.40463523997555,1.40456071893706,2.30409799884365,16.7495585417346,14.9124859071928,15.106487746146,0.837548997004143,1.68828783009504,1.83357897332172,3.83017161115768,4.41352210477219,11.3703661953433,0.454357159999104,0.453429360640713,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,4.50698943285378,0,0,0,0,0,0,1.1418387971906,0,0.593768556259299,1.90833859442749,1.52232739156071,0.691846491768175,0.753613202763113,1.17588707135705,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0,0,0,3.22058876712702,3.35114730901528,2.29911349687732,0,0,0,1.79748767285787,5.03250663100489,15.2041766056566,1.73824320192276,1.79000820131231,2.70124457927428,3.56930778749067,0.712875546952214,0.497627882440372,1.26361379216837,1.05220927943237,8.32770834961304,7.81667155073808,6.84236093260327,7.53524089178575,8.70867189136997,8.45550553880009,9.27647073141315,5.69147415625834,1.5089759505299,0.945530400839096,1.58356011747554,0.219195732427575,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,1.62055855314913,0.473489471170421,0.196764231747404,0.617068451549513,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,3.15434922846191,8.23236899034275,5.94753809370836,1.32225283331772,0.853153002140936,1.39342003116263,1.28867461322093,0.80673409849337,0.667134131534611,0.760902504450237,0.949058123089023,0.658795818896044,0.251335208800269,1.39269530428806,1.16978452271472,2.69645822596266,1.72910439899755,1.39398891278057,0.569003702859245,1.02823661348756,1.1270773567308,1.22190796707189,1.55161989734101,1.1221731182451,1.51767689098217,1.62371162777562,1.72698600625512,1.35736880313981,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.757965647081939,0.977789858652155,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.472905432318573,0.221464689648775,0.637819074629948,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,1.76605648986571,1.40654023910644,0,0.252470927204373,1.57754109708128,1.17131623288992,1.72338718186239,1.19484398976276,1.11399337041197,2.83076530788832,1.21443210502468,2.33804686329049,3.16230222357219,10.2822821254978,0.709700426041343,2.31485284767432,2.11753047159649,0,0,0.728341908464944,1.51161778482376,0.754420319023592,0.295301892880773,0,0,0.727067458955011,0,0,0,0,2.04263763452273,7.38250485528372,6.59729287292048,5.35842587578981,6.0295679438373,4.63758925765383,3.1264313914403,1.522324745573,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,1.7488850197791,2.03967832211561,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,1.42351197111511,0.813277868507395,0.648032044930808,0.836353184057875,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.518459893167171,0,1.69107881605257,0.448549638131936,0.165458490457098,2.33341426012857,2.45403664607689,1.35164900392623,1.29092962510329,3.25510962109875,8.91304427618542,5.55643477899814,2.88030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0,0.302478555410522,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0,1.6942555278512,1.84130094602871,0.572895513439397,1.03111909406213,3.42541259885321,0.755393897389701,3.37511250115903,3.60256962579376,1.35942722695261,1.03552062350364,5.50072942196136,7.98049746802062,6.82934423016537,2.91728060481953,2.30574478890781,2.02227859295016,2.00022055021454,1.85431551515005,0.64183841918363,1.26348605881899,2.78827229879264,2.82939512079114,1.591905626988,1.6646539625266,2.12511235135769,1.42888107384922,2.0859178670074,1.35036454324594,0.412085900803307,2.20798380201596,2.05721551431249,1.4198064492747,2.38436189947321,1.16277133305863,1.59985946706062,1.77690676572521,1.82927972872773,1.8414879800649,1.22223702461276,2.24456908663095,2.49133538060766,0.985044823755635,2.04615521584845,1.70430525304563,0.578719832943424,4.99621155875892,1.63752125911786,0.6446131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| ||
|short_description=p1@Zswim5 | |||
}} | }} |
Latest revision as of 05:25, 26 September 2015
Short description: | p1@Zswim5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zswim5_5end |
Coexpression cluster: | MCL_coexpression_mm9:295 |
Association with transcript: | 25bp_to_NM_001029912, uc008uhq.1_5end |
EntrezGene: | Zswim5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.10e-15 | 33 |
neuronal stem cell | 3.10e-15 | 33 |
neuroblast | 3.10e-15 | 33 |
electrically signaling cell | 3.10e-15 | 33 |
CNS neuron (sensu Vertebrata) | 1.78e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.78e-13 | 23 |
electrically responsive cell | 6.62e-11 | 39 |
electrically active cell | 6.62e-11 | 39 |
ectodermal cell | 2.92e-09 | 44 |
neurectodermal cell | 2.92e-09 | 44 |
neural cell | 8.73e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.93e-23 | 64 |
neural plate | 2.93e-23 | 64 |
presumptive neural plate | 2.93e-23 | 64 |
central nervous system | 2.59e-21 | 73 |
ectoderm-derived structure | 1.21e-20 | 95 |
ectoderm | 1.21e-20 | 95 |
presumptive ectoderm | 1.21e-20 | 95 |
nervous system | 4.40e-20 | 75 |
ecto-epithelium | 8.77e-20 | 73 |
pre-chordal neural plate | 1.10e-19 | 49 |
regional part of nervous system | 6.79e-18 | 54 |
neural tube | 3.80e-17 | 52 |
neural rod | 3.80e-17 | 52 |
future spinal cord | 3.80e-17 | 52 |
neural keel | 3.80e-17 | 52 |
brain | 5.78e-15 | 47 |
future brain | 5.78e-15 | 47 |
regional part of brain | 2.99e-14 | 46 |
anterior neural tube | 3.18e-14 | 40 |
regional part of forebrain | 6.13e-14 | 39 |
forebrain | 6.13e-14 | 39 |
future forebrain | 6.13e-14 | 39 |
structure with developmental contribution from neural crest | 2.27e-13 | 92 |
gray matter | 1.70e-11 | 34 |
brain grey matter | 3.99e-09 | 29 |
regional part of telencephalon | 3.99e-09 | 29 |
telencephalon | 3.99e-09 | 29 |