FFCP PHASE1:Mm9::chr10:6980380..6980415,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76142 | |EntrezGene=76142 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |MCL_coexpression_id=19 | ||
|TSSclassifier=NA | |||
|UniProt=Q8R4S0,Q8BUV2 | |UniProt=Q8R4S0,Q8BUV2 | ||
|association_with_transcript=0bp_to_ENSMUST00000043374,NM_133485,uc007ehq.1,uc007ehr.1,uc007ehs.1_5end | |association_with_transcript=0bp_to_ENSMUST00000043374,NM_133485,uc007ehq.1,uc007ehr.1,uc007ehs.1_5end | ||
|cluster_id=chr10:6980380..6980415,- | |||
|description=CAGE_peak_2_at_Ppp1r14c_5end | |description=CAGE_peak_2_at_Ppp1r14c_5end | ||
|id=chr10:6980380..6980415,- | |id=chr10:6980380..6980415,- | ||
|ontology_enrichment_celltype=CL:0000221!3.12e-11!44;CL:0000133!3.12e-11!44;CL:0002319!9.15e-11!43;CL:0000540!1.25e-09!33;CL:0000047!1.25e-09!33;CL:0000031!1.25e-09!33;CL:0000404!1.25e-09!33;CL:0000117!1.23e-08!23;CL:0000337!1.23e-08!23;CL:0000055!4.02e-07!50 | |ontology_enrichment_celltype=CL:0000221!3.12e-11!44;CL:0000133!3.12e-11!44;CL:0002319!9.15e-11!43;CL:0000540!1.25e-09!33;CL:0000047!1.25e-09!33;CL:0000031!1.25e-09!33;CL:0000404!1.25e-09!33;CL:0000117!1.23e-08!23;CL:0000337!1.23e-08!23;CL:0000055!4.02e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.82e-12,44;CL:0000133,5.82e-12,44;CL:0002319,2.09e-11,43;CL:0000117,2.28e-10,23;CL:0000337,2.28e-10,23;CL:0000540,5.23e-10,33;CL:0000047,5.23e-10,33;CL:0000031,5.23e-10,33;CL:0000404,5.23e-10,33;CL:0000393,5.04e-07,39;CL:0000211,5.04e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.96e-13!75;UBERON:0001016!1.96e-13!75;UBERON:0004121!1.68e-12!102;UBERON:0000924!1.68e-12!102;UBERON:0006601!1.68e-12!102;UBERON:0001017!2.36e-12!73;UBERON:0005743!2.36e-12!73;UBERON:0002020!8.20e-11!34;UBERON:0002346!8.00e-09!71;UBERON:0003075!8.00e-09!71;UBERON:0007284!8.00e-09!71;UBERON:0007100!1.00e-08!18;UBERON:0000948!1.00e-08!18;UBERON:0005498!1.00e-08!18;UBERON:0004140!1.00e-08!18;UBERON:0009881!1.00e-08!18;UBERON:0004141!1.00e-08!18;UBERON:0003084!1.00e-08!18;UBERON:0007005!1.00e-08!18;UBERON:0004139!1.00e-08!18;UBERON:0004291!1.00e-08!18;UBERON:0001049!2.99e-08!52;UBERON:0005068!2.99e-08!52;UBERON:0006241!2.99e-08!52;UBERON:0007135!2.99e-08!52;UBERON:0002791!3.10e-08!29;UBERON:0003528!3.10e-08!29;UBERON:0001893!3.10e-08!29;UBERON:0000033!7.36e-07!63 | |ontology_enrichment_uberon=UBERON:0000073!1.96e-13!75;UBERON:0001016!1.96e-13!75;UBERON:0004121!1.68e-12!102;UBERON:0000924!1.68e-12!102;UBERON:0006601!1.68e-12!102;UBERON:0001017!2.36e-12!73;UBERON:0005743!2.36e-12!73;UBERON:0002020!8.20e-11!34;UBERON:0002346!8.00e-09!71;UBERON:0003075!8.00e-09!71;UBERON:0007284!8.00e-09!71;UBERON:0007100!1.00e-08!18;UBERON:0000948!1.00e-08!18;UBERON:0005498!1.00e-08!18;UBERON:0004140!1.00e-08!18;UBERON:0009881!1.00e-08!18;UBERON:0004141!1.00e-08!18;UBERON:0003084!1.00e-08!18;UBERON:0007005!1.00e-08!18;UBERON:0004139!1.00e-08!18;UBERON:0004291!1.00e-08!18;UBERON:0001049!2.99e-08!52;UBERON:0005068!2.99e-08!52;UBERON:0006241!2.99e-08!52;UBERON:0007135!2.99e-08!52;UBERON:0002791!3.10e-08!29;UBERON:0003528!3.10e-08!29;UBERON:0001893!3.10e-08!29;UBERON:0000033!7.36e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.02e-15,92;UBERON:0001016,1.29e-12,75;UBERON:0002020,1.23e-11,34;UBERON:0004121,1.49e-11,95;UBERON:0000924,1.49e-11,95;UBERON:0006601,1.49e-11,95;UBERON:0001017,2.02e-11,73;UBERON:0007100,1.33e-10,18;UBERON:0000948,1.33e-10,18;UBERON:0005498,1.33e-10,18;UBERON:0004140,1.33e-10,18;UBERON:0009881,1.33e-10,18;UBERON:0004141,1.33e-10,18;UBERON:0003084,1.33e-10,18;UBERON:0007005,1.33e-10,18;UBERON:0004139,1.33e-10,18;UBERON:0004291,1.33e-10,18;UBERON:0003528,1.46e-08,29;UBERON:0002791,1.46e-08,29;UBERON:0001893,1.46e-08,29;UBERON:0002346,2.27e-08,64;UBERON:0003075,2.27e-08,64;UBERON:0007284,2.27e-08,64;UBERON:0010371,3.22e-08,73;UBERON:0000073,4.76e-08,54;UBERON:0001049,8.59e-08,52;UBERON:0005068,8.59e-08,52;UBERON:0006241,8.59e-08,52;UBERON:0007135,8.59e-08,52;UBERON:0000956,6.67e-07,21;UBERON:0001869,6.67e-07,21;UBERON:0000203,6.67e-07,21;UBERON:0004535,7.58e-07,23;UBERON:0001009,7.58e-07,23 | |||
|phase1_expression=1.76163731815273,0.348975407639361,1.36499771816861,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,1.27993938234725,2.2940928106717,0.57423196411502,2.15380998079537,1.72376986148711,0,0,1.55211357458713,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.31811709640683,0.388859798148567,1.25987779462826,2.87505128729943,0,0,0,0,0,0.515672092277442,4.24864567805155,3.70293685490423,4.43681982454325,0.338844532069132,0,0,0,0,2.99600110518405,3.07374644257244,2.28117147078651,2.16009501330705,1.68259969081106,7.42692559449889,5.30084498283872,6.00204916153275,5.36734637702124,4.5960939330501,1.10115880999389,1.78762273319263,1.68967186581868,4.61602007055678,5.48925861614458,2.08365348222704,1.95428099300967,1.68828783009504,1.83357897332172,5.89257170947335,5.26775218956681,6.33758115806022,9.39004797331482,12.1670211771925,0,0,0,0,0,0,0.561777680527007,0,0,0,5.21120653173718,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,1.21786191324856,0.230615497256059,1.05505848386836,0.705532242814229,1.38233250462643,0,0.289198713839823,0,6.14714029800155,1.54589062922275,3.87900202508178,0,0.878342391034642,2.51336048176146,0.255457055208591,0,0,0,2.24685959107234,0.457500602818626,3.76963056338593,1.04294592115366,2.30143911597297,0.41557608911912,2.10913641988085,0.203678727700633,0.497627882440372,0,0,0,0.689706313300419,1.26043490863744,1.50704817835715,3.60593445502038,3.33095672740609,3.09215691047105,1.29351685369508,0.215567992932842,0.567318240503458,0.351902248327898,1.31517439456545,0.278047249225598,3.1342694986995,1.02891068203972,0.398068533636986,0,0,0,16.5700618028402,14.0715635988658,20.5270750065557,25.3316867076175,27.7437566763839,29.4650185614892,36.2752953810636,41.3141038155414,33.9787146288463,47.2286769251689,35.9526746333219,28.1308769124119,33.7721970952518,20.6377108373588,14.7627060636409,1.89260953707715,10.2904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0.456994050438915,1.1270773567308,1.01825663922657,0.581857461502877,0.561086559122548,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.549122826376163,0,0.372140947668503,0,0,0,0,0.369506380333209,0.568474235311454,0.488894929326078,1.18821560042632,0.234690248288502,2.84760637651087,2.85652369063216,1.75620283072019,1.10344600874334,0.221464689648775,0.956728611944923,0.327726629431476,1.55416483679306,1.3018415272336,0,0,0,0,1.76605648986571,2.46144541843627,0,5.80683132570058,0.94652465824877,3.51394869866975,2.58508077279359,0.955875191810208,2.22798674082394,2.26461224631066,1.61924280669958,2.04579100537918,0.395287777946524,1.92792789853084,0.425820255624806,0.890328018336276,0.651547837414304,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,0,0,0,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.608929898229199,0,0.21183207086382,0.441056796109924,0.8244312647074,1.93757312035087,1.5078231232039,0.716234064018819,1.47726809770555,0,1.8542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,0,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.51968329191118,0,0.993406773906324,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.680191150845634,0,0,0,0,0.187682475451182,0.183151624267265,0.643105137237198,0,7.34177395402186,3.68260189205742,5.15605962095457,3.26521046453006,3.42541259885321,2.2661816921691,0.675022500231806,2.70192721934532,3.17199686288943,3.62432218226274,0.31136204275253,1.19707462020309,1.02440163452481,0.972426868273176,1.88651846365184,2.02227859295016,5.11167473943715,5.15087643097235,7.38114182061175,4.29585259998456,3.8021894983536,5.47016390019621,4.02658482120494,4.48176066834085,4.02048282689293,5.23923060411381,5.79421629724277,3.6652751888104,2.06042950401653,4.71036544430071,3.08582327146874,4.79184676630211,5.00715998889374,3.0522747492789,5.36423468367385,5.753793336634,4.75612729469209,3.41990624869196,4.07412341537585,3.92799590160417,4.86403574309114,4.13718825977367,3.27384834535751,5.42278944150881,3.47231899766054,4.74640098082097,3.50897412668113,3.86767897286937,7.84282161482258,3.75005412503176,5.79669589051054 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|phase1_expression=1.76163731815273,0.348975407639361,1.36499771816861,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,1.27993938234725,2.2940928106717,0.57423196411502,2.15380998079537,1.72376986148711,0,0,1.55211357458713,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.31811709640683,0.388859798148567,1.25987779462826,2.87505128729943,0,0,0,0,0,0.515672092277442,4.24864567805155,3.70293685490423,4.43681982454325,0.338844532069132,0,0,0,0,2.99600110518405,3.07374644257244,2.28117147078651,2.16009501330705,1.68259969081106,7.42692559449889,5.30084498283872,6.00204916153275,5.36734637702124,4.5960939330501,1.10115880999389,1.78762273319263,1.68967186581868,4.61602007055678,5.48925861614458,2.08365348222704,1.95428099300967,1.68828783009504,1.83357897332172,5.89257170947335,5.26775218956681,6.33758115806022,9.39004797331482,12.1670211771925,0,0,0,0,0,0,0.561777680527007,0,0,0,5.21120653173718,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,1.21786191324856,0.230615497256059,1.05505848386836,0.705532242814229,1.38233250462643,0,0.289198713839823,0,6.14714029800155,1.54589062922275,3.87900202508178,0,0.878342391034642,2.51336048176146,0.255457055208591,0,0,0,2.24685959107234,0.457500602818626,3.76963056338593,1.04294592115366,2.30143911597297,0.41557608911912,2.10913641988085,0.203678727700633,0.497627882440372,0,0,0,0.689706313300419,1.26043490863744,1.50704817835715,3.60593445502038,3.33095672740609,3.09215691047105,1.29351685369508,0.215567992932842,0.567318240503458,0.351902248327898,1.31517439456545,0.278047249225598,3.1342694986995,1.02891068203972,0.398068533636986,0,0,0,16.5700618028402,14.0715635988658,20.5270750065557,25.3316867076175,27.7437566763839,29.4650185614892,36.2752953810636,41.3141038155414,33.9787146288463,47.2286769251689,35.9526746333219,28.1308769124119,33.7721970952518,20.6377108373588,14.7627060636409,1.89260953707715,10.2904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0.456994050438915,1.1270773567308,1.01825663922657,0.581857461502877,0.561086559122548,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.549122826376163,0,0.372140947668503,0,0,0,0,0.369506380333209,0.568474235311454,0.488894929326078,1.18821560042632,0.234690248288502,2.84760637651087,2.85652369063216,1.75620283072019,1.10344600874334,0.221464689648775,0.956728611944923,0.327726629431476,1.55416483679306,1.3018415272336,0,0,0,0,1.76605648986571,2.46144541843627,0,5.80683132570058,0.94652465824877,3.51394869866975,2.58508077279359,0.955875191810208,2.22798674082394,2.26461224631066,1.61924280669958,2.04579100537918,0.395287777946524,1.92792789853084,0.425820255624806,0.890328018336276,0.651547837414304,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,0,0,0,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.608929898229199,0,0.21183207086382,0.441056796109924,0.8244312647074,1.93757312035087,1.5078231232039,0.716234064018819,1.47726809770555,0,1.8542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,0,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.51968329191118,0,0.993406773906324,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.680191150845634,0,0,0,0,0.187682475451182,0.183151624267265,0.643105137237198,0,7.34177395402186,3.68260189205742,5.15605962095457,3.26521046453006,3.42541259885321,2.2661816921691,0.675022500231806,2.70192721934532,3.17199686288943,3.62432218226274,0.31136204275253,1.19707462020309,1.02440163452481,0.972426868273176,1.88651846365184,2.02227859295016,5.11167473943715,5.15087643097235,7.38114182061175,4.29585259998456,3.8021894983536,5.47016390019621,4.02658482120494,4.48176066834085,4.02048282689293,5.23923060411381,5.79421629724277,3.6652751888104,2.06042950401653,4.71036544430071,3.08582327146874,4.79184676630211,5.00715998889374,3.0522747492789,5.36423468367385,5.753793336634,4.75612729469209,3.41990624869196,4.07412341537585,3.92799590160417,4.86403574309114,4.13718825977367,3.27384834535751,5.42278944150881,3.47231899766054,4.74640098082097,3.50897412668113,3.86767897286937,7.84282161482258,3.75005412503176,5.79669589051054 | ||
|short_description=p2@Ppp1r14c | |short_description=p2@Ppp1r14c | ||
}} | }} |
Latest revision as of 06:15, 26 September 2015
Short description: | p2@Ppp1r14c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppp1r14c_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000043374, NM_133485, uc007ehq.1, uc007ehr.1, uc007ehs.1_5end |
EntrezGene: | Ppp1r14c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.82e-12 | 44 |
neurectodermal cell | 5.82e-12 | 44 |
neural cell | 2.09e-11 | 43 |
CNS neuron (sensu Vertebrata) | 2.28e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.28e-10 | 23 |
neuron | 5.23e-10 | 33 |
neuronal stem cell | 5.23e-10 | 33 |
neuroblast | 5.23e-10 | 33 |
electrically signaling cell | 5.23e-10 | 33 |
electrically responsive cell | 5.04e-07 | 39 |
electrically active cell | 5.04e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.02e-15 | 92 |
nervous system | 1.29e-12 | 75 |
gray matter | 1.23e-11 | 34 |
ectoderm-derived structure | 1.49e-11 | 95 |
ectoderm | 1.49e-11 | 95 |
presumptive ectoderm | 1.49e-11 | 95 |
central nervous system | 2.02e-11 | 73 |
primary circulatory organ | 1.33e-10 | 18 |
heart | 1.33e-10 | 18 |
primitive heart tube | 1.33e-10 | 18 |
primary heart field | 1.33e-10 | 18 |
anterior lateral plate mesoderm | 1.33e-10 | 18 |
heart tube | 1.33e-10 | 18 |
heart primordium | 1.33e-10 | 18 |
cardiac mesoderm | 1.33e-10 | 18 |
cardiogenic plate | 1.33e-10 | 18 |
heart rudiment | 1.33e-10 | 18 |
brain grey matter | 1.46e-08 | 29 |
regional part of telencephalon | 1.46e-08 | 29 |
telencephalon | 1.46e-08 | 29 |
neurectoderm | 2.27e-08 | 64 |
neural plate | 2.27e-08 | 64 |
presumptive neural plate | 2.27e-08 | 64 |
ecto-epithelium | 3.22e-08 | 73 |
regional part of nervous system | 4.76e-08 | 54 |
neural tube | 8.59e-08 | 52 |
neural rod | 8.59e-08 | 52 |
future spinal cord | 8.59e-08 | 52 |
neural keel | 8.59e-08 | 52 |
cerebral cortex | 6.67e-07 | 21 |
cerebral hemisphere | 6.67e-07 | 21 |
pallium | 6.67e-07 | 21 |
cardiovascular system | 7.58e-07 | 23 |
circulatory system | 7.58e-07 | 23 |