FFCP PHASE1:Mm9::chr5:87233306..87233322,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:87233306..87233322,+ to FFCP PHASE1:Mm9::chr5:87233306..87233322,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=231386 | |EntrezGene=231386 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=298 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q5K9 | |UniProt=E9Q5K9 | ||
|association_with_transcript=48bp_to_ENSMUST00000120498_5end | |||
|cluster_id=chr5:87233306..87233322,+ | |||
|description=CAGE_peak_2_at_Ythdc1_5end | |||
|id=chr5:87233306..87233322,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.21e-07!9;CL:0000789!6.21e-07!9;CL:0002420!6.21e-07!9;CL:0002419!6.21e-07!9;CL:0000790!6.21e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.20e-07,9;CL:0000789,6.20e-07,9;CL:0002420,6.20e-07,9;CL:0002419,6.20e-07,9;CL:0000790,6.20e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.26e-08!23;UBERON:0000974!1.26e-08!23;UBERON:0004807!1.26e-08!23;UBERON:0005058!1.26e-08!23;UBERON:0003351!1.26e-08!23;UBERON:0009113!1.26e-08!23;UBERON:0003295!1.26e-08!23;UBERON:0009722!1.26e-08!23;UBERON:0005562!1.26e-08!23;UBERON:0007690!1.26e-08!23;UBERON:0006562!3.22e-08!24;UBERON:0001557!3.22e-08!24;UBERON:0001042!3.22e-08!24;UBERON:0008814!3.22e-08!24;UBERON:0009145!3.22e-08!24;UBERON:0000065!6.06e-08!41;UBERON:0003408!1.64e-07!24;UBERON:0001004!3.53e-07!42;UBERON:0004177!4.82e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.08e-10,43;UBERON:0002370,1.18e-08,23;UBERON:0000974,1.18e-08,23;UBERON:0004807,1.18e-08,23;UBERON:0005058,1.18e-08,23;UBERON:0003351,1.18e-08,23;UBERON:0009113,1.18e-08,23;UBERON:0003295,1.18e-08,23;UBERON:0009722,1.18e-08,23;UBERON:0005562,1.18e-08,23;UBERON:0007690,1.18e-08,23;UBERON:0007811,1.55e-08,36;UBERON:0006562,3.02e-08,24;UBERON:0001557,3.02e-08,24;UBERON:0001042,3.02e-08,24;UBERON:0008814,3.02e-08,24;UBERON:0009145,3.02e-08,24;UBERON:0000065,5.76e-08,41;UBERON:0003408,1.46e-07,24;UBERON:0001004,3.22e-07,42;UBERON:0004177,4.57e-07,29;UBERON:0005057,4.57e-07,29 | |||
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| ||
|short_description=p2@Ythdc1 | |||
}} | }} |
Latest revision as of 06:34, 26 September 2015
Short description: | p2@Ythdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ythdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:298 |
Association with transcript: | 48bp_to_ENSMUST00000120498_5end |
EntrezGene: | Ythdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.20e-07 | 9 |
alpha-beta T cell | 6.20e-07 | 9 |
immature T cell | 6.20e-07 | 9 |
mature T cell | 6.20e-07 | 9 |
immature alpha-beta T cell | 6.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 4.08e-10 | 43 |
thymus | 1.18e-08 | 23 |
neck | 1.18e-08 | 23 |
respiratory system epithelium | 1.18e-08 | 23 |
hemolymphoid system gland | 1.18e-08 | 23 |
pharyngeal epithelium | 1.18e-08 | 23 |
thymic region | 1.18e-08 | 23 |
pharyngeal gland | 1.18e-08 | 23 |
entire pharyngeal arch endoderm | 1.18e-08 | 23 |
thymus primordium | 1.18e-08 | 23 |
early pharyngeal endoderm | 1.18e-08 | 23 |
craniocervical region | 1.55e-08 | 36 |
pharynx | 3.02e-08 | 24 |
upper respiratory tract | 3.02e-08 | 24 |
chordate pharynx | 3.02e-08 | 24 |
pharyngeal arch system | 3.02e-08 | 24 |
pharyngeal region of foregut | 3.02e-08 | 24 |
respiratory tract | 5.76e-08 | 41 |
gland of gut | 1.46e-07 | 24 |
respiratory system | 3.22e-07 | 42 |
hemopoietic organ | 4.57e-07 | 29 |
immune organ | 4.57e-07 | 29 |