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FFCP PHASE1:Mm9::chr4:120689806..120689866,-: Difference between revisions

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{{FFCP|EntrezGene=69780|HGNC=|MCL_coexpression_id=1585|UniProt=Q7TN29,B1AVZ1|association_with_transcript=0bp_to_ENSMUST00000043200,NM_133716,uc008unw.2_5end|description=CAGE_peak_1_at_Smap2_5end|id=chr4:120689806..120689866,-|ontology_enrichment_celltype=CL:0000117!1.75e-08!23;CL:0000337!1.75e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.75e-08,23;CL:0000337,1.75e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.56e-13!52;UBERON:0005068!9.56e-13!52;UBERON:0006241!9.56e-13!52;UBERON:0007135!9.56e-13!52;UBERON:0002020!6.28e-12!34;UBERON:0000955!8.29e-12!50;UBERON:0006238!8.29e-12!50;UBERON:0002616!1.52e-11!49;UBERON:0002791!3.62e-10!29;UBERON:0003528!3.62e-10!29;UBERON:0001893!3.62e-10!29;UBERON:0003080!2.03e-09!40;UBERON:0002780!6.83e-09!39;UBERON:0001890!6.83e-09!39;UBERON:0006240!6.83e-09!39;UBERON:0000033!1.07e-08!63;UBERON:0001017!3.05e-08!73;UBERON:0005743!3.05e-08!73;UBERON:0000073!3.63e-07!75;UBERON:0001016!3.63e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-13,54;UBERON:0001049,9.56e-13,52;UBERON:0005068,9.56e-13,52;UBERON:0006241,9.56e-13,52;UBERON:0007135,9.56e-13,52;UBERON:0002020,6.28e-12,34;UBERON:0000955,1.09e-10,47;UBERON:0006238,1.09e-10,47;UBERON:0002616,1.96e-10,46;UBERON:0003528,3.62e-10,29;UBERON:0002791,3.62e-10,29;UBERON:0001893,3.62e-10,29;UBERON:0003080,2.03e-09,40;UBERON:0002780,6.83e-09,39;UBERON:0001890,6.83e-09,39;UBERON:0006240,6.83e-09,39;UBERON:0001017,3.05e-08,73;UBERON:0002346,1.34e-07,64;UBERON:0003075,1.34e-07,64;UBERON:0007284,1.34e-07,64;UBERON:0001016,3.63e-07,75|phase1_expression=38.7560209993601,99.1090157695785,106.924821256541,87.4121570676739,95.170188689806,51.3710572050383,48.1242039626783,55.2647824329946,20.695942156295,30.4283884218592,10.1018601253048,18.9857738408901,29.104124088305,38.6398178691969,54.9631106995843,47.3792125692193,65.0592546659176,87.0675576388736,88.16458080849,71.2974615020691,36.7387013452621,22.6383368738018,11.4927907221132,41.7580223490791,35.099620003277,98.1936658636685,80.9832552779061,67.2270245979974,42.7552693776841,37.5524893342297,39.4680308966442,29.211410979143,33.8285633171514,31.6963362030877,20.5084650023405,16.7896991812077,18.9877501324003,190.013360354556,130.483002535475,153.392456984323,219.410345035568,215.15932776191,194.204141212461,9.31636453019272,10.3404469843905,9.17733760808408,50.0730460382745,15.4797861030117,23.286735369854,21.5817187972455,19.0381533410493,17.2503077237966,128.018128422053,59.4796956449302,47.3892256790874,20.0662360108039,23.2092086350393,26.814948798427,65.1459003967905,70.3558002431804,61.4816461400994,30.4960078862219,32.014612660001,65.2427295029014,70.2095117422552,72.4689717245022,41.0452151410214,35.348084089583,39.8168111264554,46.712054662765,43.9579169224388,73.9836049605851,60.0762431388389,50.588700075776,53.4817728281759,46.8801581171111,58.361416929676,71.1218473134496,66.0508093001847,72.0099131006858,70.8114361482651,62.5096044668112,70.354115748348,79.3495280144669,71.3567817117703,59.2203456802072,58.087645766034,63.9350099180781,15.8267744066355,16.550171663386,30.1459068249745,26.673140186423,47.5979933595425,29.1439723484421,30.5394916200404,29.5697745484241,34.549327352411,44.8231748380292,30.9145345477414,26.8538076627859,33.2390470672966,26.9485602570067,30.5766287647975,42.6640021891999,17.3192832808971,10.8944742154292,11.1215377903252,43.2756904135237,69.6542907010892,30.2821963692243,24.9818870543236,26.4884966131563,30.9024766323118,24.1156224884196,23.517741427141,25.6359846312538,50.1805784500779,17.6411215442292,84.0380024352381,34.4563390387982,44.3891452105391,43.1538975290348,26.0948465705371,64.1189945455288,55.9222707191925,44.1940705510863,23.2441341541485,28.7953310876836,29.2261522268049,95.1170560220624,113.002648896201,92.2302944508425,103.251646194212,109.957646652042,84.7775221803005,87.4480407935214,24.135929232525,43.7912536547527,19.459652399393,17.2562321826909,23.8120410621748,22.7603083389138,23.9482632641114,24.2634756715501,26.4661981698665,32.7971123929215,30.9215691047105,34.1488449375501,21.5567992932842,18.9106080167819,19.3546236580344,19.5084201860542,22.2437799380478,32.0391993200393,31.4846668704153,21.6947350832158,25.2796747432765,20.5878325691772,25.5747149456033,23.6123380690472,21.8109235782419,23.4080679899319,20.3600472603281,16.7249596985293,20.5175260140213,19.0677834695334,21.7301455133692,21.7183536802935,26.9878153858108,25.938459324497,32.1843173897047,44.7371961521517,37.3235195994786,38.9198614405078,80.3307603514966,62.6689089389842,45.5977920517641,37.2875298995597,21.7554015545939,22.2947204986021,18.0414445850931,25.4121241025412,37.1371333220933,55.3556571987547,46.5038480313621,57.6446341534038,61.577126156066,65.0587663574563,62.1935437909993,35.9527763461689,35.0143640797005,37.6377006450754,19.3461258972143,17.4800224292885,7.88954149711563,20.1614814566861,20.5589636397683,22.4434623649019,29.8476455226494,29.07919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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69780
|HGNC=
|MCL_coexpression_id=1585
|TSSclassifier=NA
|UniProt=Q7TN29,B1AVZ1
|association_with_transcript=0bp_to_ENSMUST00000043200,NM_133716,uc008unw.2_5end
|cluster_id=chr4:120689806..120689866,-
|description=CAGE_peak_1_at_Smap2_5end
|id=chr4:120689806..120689866,-
|ontology_enrichment_celltype=CL:0000117!1.75e-08!23;CL:0000337!1.75e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.75e-08,23;CL:0000337,1.75e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!9.56e-13!52;UBERON:0005068!9.56e-13!52;UBERON:0006241!9.56e-13!52;UBERON:0007135!9.56e-13!52;UBERON:0002020!6.28e-12!34;UBERON:0000955!8.29e-12!50;UBERON:0006238!8.29e-12!50;UBERON:0002616!1.52e-11!49;UBERON:0002791!3.62e-10!29;UBERON:0003528!3.62e-10!29;UBERON:0001893!3.62e-10!29;UBERON:0003080!2.03e-09!40;UBERON:0002780!6.83e-09!39;UBERON:0001890!6.83e-09!39;UBERON:0006240!6.83e-09!39;UBERON:0000033!1.07e-08!63;UBERON:0001017!3.05e-08!73;UBERON:0005743!3.05e-08!73;UBERON:0000073!3.63e-07!75;UBERON:0001016!3.63e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-13,54;UBERON:0001049,9.56e-13,52;UBERON:0005068,9.56e-13,52;UBERON:0006241,9.56e-13,52;UBERON:0007135,9.56e-13,52;UBERON:0002020,6.28e-12,34;UBERON:0000955,1.09e-10,47;UBERON:0006238,1.09e-10,47;UBERON:0002616,1.96e-10,46;UBERON:0003528,3.62e-10,29;UBERON:0002791,3.62e-10,29;UBERON:0001893,3.62e-10,29;UBERON:0003080,2.03e-09,40;UBERON:0002780,6.83e-09,39;UBERON:0001890,6.83e-09,39;UBERON:0006240,6.83e-09,39;UBERON:0001017,3.05e-08,73;UBERON:0002346,1.34e-07,64;UBERON:0003075,1.34e-07,64;UBERON:0007284,1.34e-07,64;UBERON:0001016,3.63e-07,75
|phase1_expression=38.7560209993601,99.1090157695785,106.924821256541,87.4121570676739,95.170188689806,51.3710572050383,48.1242039626783,55.2647824329946,20.695942156295,30.4283884218592,10.1018601253048,18.9857738408901,29.104124088305,38.6398178691969,54.9631106995843,47.3792125692193,65.0592546659176,87.0675576388736,88.16458080849,71.2974615020691,36.7387013452621,22.6383368738018,11.4927907221132,41.7580223490791,35.099620003277,98.1936658636685,80.9832552779061,67.2270245979974,42.7552693776841,37.5524893342297,39.4680308966442,29.211410979143,33.8285633171514,31.6963362030877,20.5084650023405,16.7896991812077,18.9877501324003,190.013360354556,130.483002535475,153.392456984323,219.410345035568,215.15932776191,194.204141212461,9.31636453019272,10.3404469843905,9.17733760808408,50.0730460382745,15.4797861030117,23.286735369854,21.5817187972455,19.0381533410493,17.2503077237966,128.018128422053,59.4796956449302,47.3892256790874,20.0662360108039,23.2092086350393,26.814948798427,65.1459003967905,70.3558002431804,61.4816461400994,30.4960078862219,32.014612660001,65.2427295029014,70.2095117422552,72.4689717245022,41.0452151410214,35.348084089583,39.8168111264554,46.712054662765,43.9579169224388,73.9836049605851,60.0762431388389,50.588700075776,53.4817728281759,46.8801581171111,58.361416929676,71.1218473134496,66.0508093001847,72.0099131006858,70.8114361482651,62.5096044668112,70.354115748348,79.3495280144669,71.3567817117703,59.2203456802072,58.087645766034,63.9350099180781,15.8267744066355,16.550171663386,30.1459068249745,26.673140186423,47.5979933595425,29.1439723484421,30.5394916200404,29.5697745484241,34.549327352411,44.8231748380292,30.9145345477414,26.8538076627859,33.2390470672966,26.9485602570067,30.5766287647975,42.6640021891999,17.3192832808971,10.8944742154292,11.1215377903252,43.2756904135237,69.6542907010892,30.2821963692243,24.9818870543236,26.4884966131563,30.9024766323118,24.1156224884196,23.517741427141,25.6359846312538,50.1805784500779,17.6411215442292,84.0380024352381,34.4563390387982,44.3891452105391,43.1538975290348,26.0948465705371,64.1189945455288,55.9222707191925,44.1940705510863,23.2441341541485,28.7953310876836,29.2261522268049,95.1170560220624,113.002648896201,92.2302944508425,103.251646194212,109.957646652042,84.7775221803005,87.4480407935214,24.135929232525,43.7912536547527,19.459652399393,17.2562321826909,23.8120410621748,22.7603083389138,23.9482632641114,24.2634756715501,26.4661981698665,32.7971123929215,30.9215691047105,34.1488449375501,21.5567992932842,18.9106080167819,19.3546236580344,19.5084201860542,22.2437799380478,32.0391993200393,31.4846668704153,21.6947350832158,25.2796747432765,20.5878325691772,25.5747149456033,23.6123380690472,21.8109235782419,23.4080679899319,20.3600472603281,16.7249596985293,20.5175260140213,19.0677834695334,21.7301455133692,21.7183536802935,26.9878153858108,25.938459324497,32.1843173897047,44.7371961521517,37.3235195994786,38.9198614405078,80.3307603514966,62.6689089389842,45.5977920517641,37.2875298995597,21.7554015545939,22.2947204986021,18.0414445850931,25.4121241025412,37.1371333220933,55.3556571987547,46.5038480313621,57.6446341534038,61.577126156066,65.0587663574563,62.1935437909993,35.9527763461689,35.0143640797005,37.6377006450754,19.3461258972143,17.4800224292885,7.88954149711563,20.1614814566861,20.5589636397683,22.4434623649019,29.8476455226494,29.0791991519816,26.2187875495096,28.3813477020141,45.0607993172466,59.0631674234973,49.9259847587536,57.3398386581377,59.6408756882199,55.7119239028083,44.5595240617485,42.57902834272,52.5318134751115,46.9500016551619,37.3797336971122,54.3325783596015,42.7491612166948,52.2838277350521,45.5669430345657,61.2703272131476,43.9712592596519,17.2437184711141,19.7187621494851,13.4098617762399,15.7242466353296,22.9483572695288,26.4228441383475,27.5138443479496,33.8915559828311,28.1260155853944,29.8180417389501,30.642439851843,38.1633809923629,36.0176155867964,42.2215595029962,31.5465296614852,26.555270743028,20.1433824802455,90.8716339330903,89.9013636162198,33.2787939114651,23.2273253028023,16.4064274096453,18.7410597262386,22.8348801596767,21.7461606136822,20.7202766896627,19.2492040936406,16.1924280669958,18.9966307642353,19.7643888973262,52.3753745767545,23.2781739741561,34.900858318782,24.59593086239,21.2811458634571,42.4784442687881,26.705869977048,17.8370898609203,27.3477365646052,48.134208539566,38.7368286409349,41.8653834932518,36.3533729477506,28.5197902707777,49.3017342379873,60.0886068877493,45.3796390292022,36.4270378156553,20.5269647195694,27.6827583295095,29.1498367642966,28.7291178500483,32.6414936211789,35.2134904088539,41.1027681304709,15.4883327322049,26.4790088579775,24.2581237860458,31.3283880588812,30.1938477921343,28.648639340874,31.3949264728249,35.4544343449332,44.888048840997,94.3814787233494,71.936640815896,42.9284685363503,51.4840786087798,74.7822774308623,80.5129001276838,87.1644839916851,43.0045427884454,38.6266008413296,45.0531914602422,33.413471630529,26.0977194704437,22.3651413839534,21.0610414602512,24.0451540416639,28.8238584144954,32.6371718251266,33.1440357458597,37.1693437617322,33.3110481359908,47.8431271076933,93.5730278215756,26.0158790116523,19.8550188548517,22.5563378479095,25.8319646955462,23.6538575687089,20.7722312402985,18.6192270326849,21.2864469184193,41.794052902899,49.253131070095,40.765434561035,30.2060570782345,25.7804502483716,23.3857481360031,23.810550523775,23.8417625737518,27.043976141993,30.1286635436138,30.2899349844443,29.4158273688299,27.6263747274943,33.8178846166941,35.1173221987203,39.7381467417334,38.5441652145859,14.6510729226883,12.6496537819361,11.0803846800292,18.1598218390259,28.903101219482,28.7548050099606,31.5121517246227,24.5770330977328,79.6300098090064,66.2868340570335,75.049312260561,68.3975665727877,64.3977568584404,82.3379348154774,89.1029700305984,79.2565317674628,91.5347666148093,87.5014926860576,27.1922850670543,26.3356416444681,29.5369137954652,30.8745530676733,45.2764431276442,45.5931900956035,27.3363475195987,27.6086976700118,31.7710017495897,31.3344542587109,34.4731847850726,30.3688409631583,26.9687541513261,30.5399976971226,28.8900408846735,26.1961530205691,31.5205366570007,31.0583844946565,30.906442560248,27.8205959054011,24.6865861717499,31.2357418840434,29.0892151735732,26.1623549938191,29.5503454504138,26.145913838528,27.9879798495342,22.8870648950923,30.6917297291648,23.0068331379673,30.7264696941611,30.0438671245469,22.5077073743329,29.7478735077055,34.144470143662,48.9628732758374,36.7272625259291,33.9496265396311,20.0852748672286,28.0151102281785,27.1285367675893
|short_description=p1@Smap2
}}

Latest revision as of 07:02, 26 September 2015

Short description:p1@Smap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smap2_5end
Coexpression cluster:MCL_coexpression_mm9:1585
Association with transcript: 0bp_to_ENSMUST00000043200, NM_133716, uc008unw.2_5end
EntrezGene:Smap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I599.11
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6106.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I387.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I495.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I751.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I848.12
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E955.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F230.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.10
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E429.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.64
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A154.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A347.38
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A565.06
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A287.07
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A488.16
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A671.30
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D141.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D235.10
GP2+ M cell, pool1.CNhs13228.11845-124H998.19
GP2+ M cell, pool2.CNhs13231.11846-124I180.98
GP2+ M cell, pool3.CNhs13240.11847-124I267.23
Ileum epithelium, pool1.CNhs13199.10252-104B942.76
Ileum epithelium, pool2.CNhs13232.10253-104C137.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C839.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I329.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G633.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.79
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8190.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1130.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3153.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9219.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2215.16
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4194.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.34
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B750.07
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.29
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2128.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I959.48
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A147.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.81
Mouse Granule cells, donor1.CNhs12131.11713-123C365.15
Mouse Granule cells, donor2.CNhs12357.11731-123E370.36
Mouse Granule cells, donor3.CNhs12108.11636-122C761.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D132.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C765.24
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E770.21
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D272.47
Mouse Microglia, donor1.CNhs12629.11718-123C841.05
Mouse Microglia, donor2.CNhs12634.11736-123E835.35
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D539.82
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F546.71
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D943.96
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F173.98
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D560.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D250.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F253.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D646.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D358.36
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F371.12
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D766.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D472.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F470.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D862.51
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E470.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E579.35
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I671.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D659.22
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F658.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E163.94
Mouse Schwann, donor1.CNhs12507.11728-123D915.83
Mouse Schwann, donor2.CNhs12573.11746-123F916.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G330.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F726.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C447.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.14
Mouse hepatocyte, donor6.CNhs13090.11822-124F430.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I744.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E330.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.85
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G633.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B643.28
accessory axillary lymph node, adult.CNhs10475.1063-29H969.65
adrenal gland, adult.CNhs10508.49-24D730.28
adrenal gland, embryo E14.CNhs11038.406-44C524.98
adrenal gland, embryo E16.CNhs11004.1254-43D626.49
adrenal gland, embryo E17.CNhs11043.1263-45I130.90
adrenal gland, embryo E18.CNhs11026.1262-18F524.12
adrenal gland, neonate N00.CNhs11191.1311-23C123.52
adrenal gland, neonate N25.CNhs11223.1377-27I325.64
amnion, adult pregnant day17.5.CNhs10488.583-22A850.18
aorta, adult.CNhs10498.46-23H117.64
bone (os femoris), adult.CNhs10483.56-12G284.04
bone (os femoris), neonate N02.CNhs11227.1985-43F534.46
bone (os femoris), neonate N16.CNhs11225.1525-43A644.39
bone (os femoris), neonate N20.CNhs11195.1350-25C343.15
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B264.12
cerebellum, neonate N30.CNhs11135.1395-42I255.92
colon, adult.CNhs10468.36-18H744.19
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D128.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.23
corpora quadrigemina, adult.CNhs10501.16-22A495.12
corpus striatum, adult.CNhs10487.19-21D8113.00
corpus striatum, neonate N00.CNhs11226.630-43F192.23
cortex, adult.CNhs10473.12-14D5103.25
cortex, neonate N30.CNhs11107.1392-42F2109.96
diencephalon, adult.CNhs10482.20-12F284.78
diencephalon, neonate N30.CNhs11201.1388-42B287.45
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A243.79
epididymis, adult.CNhs10490.58-23B219.46
eyeball, adult.CNhs10484.31-12G417.26
eyeball, embryo E12.CNhs11016.345-16C623.81
eyeball, embryo E14.CNhs10521.399-16E222.76
eyeball, embryo E15.CNhs10593.426-16C923.95
eyeball, embryo E17.CNhs11023.1261-18D424.26
eyeball, neonate N00.CNhs11207.633-15C626.47
eyeball, neonate N01.CNhs11140.1532-43E732.80
eyeball, neonate N02.CNhs11205.1551-44G830.92
eyeball, neonate N16.CNhs11188.777-19A234.15
forelimb, embryo E11.CNhs10596.335-25E221.56
forelimb, embryo E12.CNhs10600.359-14H218.91
forelimb, embryo E13.CNhs10589.384-1E219.35
forelimb, embryo E14.CNhs10577.413-26A819.51
forelimb, embryo E15.CNhs11007.437-20E722.24
forelimb, embryo E17.CNhs10598.1517-43C432.04
forelimb, embryo E18.CNhs11008.1520-43B531.48
gonad, embryo E13.CNhs11044.1564-45I621.69
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.59
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D525.57
heart, embryo E11.CNhs10586.331-24E923.61
heart, embryo E12.CNhs11015.353-12F521.81
heart, embryo E13.CNhs11013.376-3I923.41
heart, embryo E14.CNhs10597.403-26D420.36
heart, embryo E15.CNhs11017.431-16C816.72
heart, embryo E16.CNhs11021.457-17C620.52
heart, embryo E17.CNhs11025.479-18E519.07
heart, embryo E18.CNhs11030.1283-20G321.73
heart, neonate N00.CNhs11213.639-21E321.72
heart, neonate N03.CNhs11221.1349-25I226.99
heart, neonate N10.CNhs11118.749-24G125.94
heart, neonate N16.CNhs11209.782-15G132.18
heart, neonate N20.CNhs11127.821-26I644.74
heart, neonate N25.CNhs11196.1351-25D337.32
heart, neonate N30.CNhs11202.1390-42D238.92
hippocampus, adult.CNhs10478.13-16E880.33
hippocampus, neonate N00.CNhs11228.627-43G162.67
intestinal mucosa, adult.CNhs10506.860-29I345.60
intestine, adult.CNhs10496.178-9A337.29
intestine, embryo E12.CNhs11019.1251-16I521.76
intestine, embryo E13.CNhs11010.381-16D522.29
intestine, embryo E15.CNhs10602.976-16D818.04
intestine, embryo E16.CNhs10585.463-22H425.41
intestine, embryo E17.CNhs10582.482-18D337.14
intestine, embryo E18.CNhs10526.1289-20F755.36
intestine, neonate N00.CNhs11126.644-26D146.50
intestine, neonate N01.CNhs11192.1322-23E957.64
intestine, neonate N06.CNhs11102.688-20B861.58
intestine, neonate N07.CNhs11095.720-20F265.06
intestine, neonate N10.CNhs11098.755-23A562.19
intestine, neonate N20.CNhs11187.827-18D135.95
intestine, neonate N25.CNhs11121.1352-25E335.01
intestine, neonate N30.CNhs11131.1384-42G137.64
kidney, embryo E14.CNhs10606.411-4I919.35
kidney, embryo E15.CNhs10997.434-16F817.48
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I220.16
kidney, embryo E18.CNhs11001.1288-20C720.56
kidney, neonate N00.CNhs11214.646-21G722.44
kidney, neonate N10.CNhs11206.758-6D529.85
kidney, neonate N20.CNhs11113.832-19I129.08
kidney, neonate N25.CNhs11122.1353-25F326.22
kidney, neonate N30.CNhs11203.1385-42H128.38
liver, adult pregnant day01.CNhs10466.508-5B245.06
liver, embryo E12.CNhs10601.355-15F859.06
liver, embryo E13.CNhs10524.378-3H649.93
liver, embryo E14.CNhs10594.409-16E157.34
liver, embryo E15.CNhs10520.433-16D759.64
liver, embryo E16.CNhs10523.462-17F555.71
liver, embryo E17.CNhs10510.481-18A344.56
liver, embryo E18.CNhs10579.499-43G442.58
liver, neonate N00.CNhs11117.641-24F452.53
liver, neonate N03.CNhs11123.1345-25G246.95
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H254.33
liver, neonate N10.CNhs11115.751-24B942.75
liver, neonate N20.CNhs11220.823-25A352.28
liver, neonate N25.CNhs11198.1368-26H145.57
liver, neonate N30.CNhs11106.1382-42D161.27
lung, adult.CNhs10474.28-22B143.97
lung, embryo E12.CNhs10522.354-16G217.24
lung, embryo E14.CNhs10604.404-26F819.72
lung, embryo E15.CNhs11020.432-17C513.41
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A622.95
lung, embryo E18.CNhs10583.1287-20I626.42
lung, neonate N00.CNhs11224.640-42C627.51
lung, neonate N06.CNhs11212.683-20E533.89
lung, neonate N07.CNhs11111.715-19A328.13
lung, neonate N10.CNhs11219.750-23E629.82
lung, neonate N20.CNhs11109.822-18A430.64
lung, neonate N25.CNhs11119.1359-25C738.16
lung, neonate N30.CNhs11133.1394-42H236.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A142.22
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A131.55
mammary gland, adult lactating day02.CNhs10480.595-22B626.56
mammary gland, adult pregnant day19.CNhs10476.588-5H220.14
medulla oblongata, adult.CNhs10477.17-12C290.87
medulla oblongata, neonate N30.CNhs11200.1396-42A389.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C733.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C223.23
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.76
olfactory brain, adult.CNhs10489.18-22I952.38
ovary, adult.CNhs10507.91-2I723.28
ovary, embryo E18.CNhs11040.505-44H734.90
ovary, neonate N00.CNhs11217.1299-22I424.60
oviduct, adult pregnant day01.CNhs10500.988-6G621.28
pancreas, adult.CNhs10486.34-16E442.48
pancreas, embryo E14.CNhs11012.405-44F426.71
pancreas, embryo E15.CNhs11042.1556-45F217.84
pancreas, embryo E16.CNhs11003.460-26E527.35
pancreas, embryo E17.CNhs10599.1558-45G348.13
pancreas, embryo E18.CNhs10580.1535-43I738.74
pancreas, neonate N00.CNhs11105.645-26G941.87
pancreas, neonate N01.CNhs11138.1531-43D736.35
pancreas, neonate N02.CNhs11139.1539-43D828.52
pancreas, neonate N16.CNhs11136.787-43B649.30
pancreas, neonate N25.CNhs11094.1555-45E260.09
pancreas, neonate N30.CNhs11182.1548-44H545.38
pituitary gland, adult.CNhs10493.21-1G836.43
pituitary gland, embryo E12.CNhs11018.346-16E620.53
pituitary gland, embryo E13.CNhs11009.370-44C727.68
pituitary gland, embryo E14.CNhs11037.398-44A529.15
pituitary gland, embryo E15.CNhs10592.427-16B928.73
pituitary gland, embryo E16.CNhs11036.449-43F632.64
pituitary gland, embryo E17.CNhs11039.1265-44F535.21
pituitary gland, neonate N00.CNhs11190.1308-22E941.10
placenta, adult pregnant day10.CNhs10472.539-13I715.49
placenta, adult pregnant day17.CNhs10464.577-18G326.48
prostate, adult.CNhs10470.859-1F824.26
skin, adult.CNhs10492.30-1C331.33
skin, neonate N00.CNhs11124.650-25G430.19
skin, neonate N03.CNhs11215.662-22H328.65
skin, neonate N06.CNhs11097.693-20I531.39
skin, neonate N10.CNhs11108.762-6C435.45
small intestine, neonate N16.CNhs11114.790-21I144.89
spinal cord, adult.CNhs10505.24-13C994.38
spleen, adult.CNhs10465.25-2G271.94
spleen, embryo E16.CNhs11035.461-43C142.93
spleen, embryo E18.CNhs11011.1271-21F251.48
spleen, neonate N10.CNhs11116.752-24D174.78
spleen, neonate N20.CNhs11112.824-19H180.51
spleen, neonate N25.CNhs11099.1354-25G387.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C938.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D345.05
stomach, adult.CNhs10503.33-1H633.41
stomach, embryo E12.CNhs10588.356-43E326.10
stomach, embryo E15.CNhs10603.1252-16G822.37
stomach, embryo E16.CNhs11022.459-17D421.06
stomach, embryo E17.CNhs11006.1035-18D524.05
stomach, embryo E18.CNhs10999.1286-20C628.82
stomach, neonate N03.CNhs11193.1340-24B832.64
stomach, neonate N07.CNhs11210.718-18A933.14
stomach, neonate N25.CNhs11104.1355-25E437.17
stomach, neonate N30.CNhs11134.1386-42I133.31
submandibular gland, adult.CNhs10469.59-29C147.84
testis, adult.CNhs10504.57-7G593.57
testis, embryo E13.CNhs11031.389-23F526.02
testis, embryo E15.CNhs11034.443-27C519.86
testis, embryo E16.CNhs11033.470-26G522.56
testis, embryo E17.CNhs11029.486-18I525.83
testis, embryo E18.CNhs11027.503-18G523.65
testis, neonate N00.CNhs11189.1300-22B720.77
testis, neonate N07.CNhs11222.726-26I418.62
testis, neonate N10.CNhs11204.763-44D921.29
testis, neonate N20.CNhs11110.839-18H341.79
testis, neonate N30.CNhs11130.1391-42E249.25
thymus, adult.CNhs10471.38-12B540.77
thymus, embryo E14.CNhs11041.402-44I430.21
thymus, embryo E15.CNhs11005.430-45I225.78
thymus, embryo E16.CNhs11002.456-26C523.39
thymus, embryo E17.CNhs10581.478-18C123.81
thymus, embryo E18.CNhs10595.1273-19G423.84
thymus, neonate N02.CNhs11181.1541-43F827.04
thymus, neonate N03.CNhs11137.2104-43C730.13
thymus, neonate N06.CNhs11197.681-26C430.29
thymus, neonate N07.CNhs11211.713-19D329.42
thymus, neonate N10.CNhs11194.748-24E427.63
thymus, neonate N20.CNhs11186.820-7A233.82
thymus, neonate N25.CNhs11125.1362-25G735.12
thymus, neonate N30.CNhs11132.1393-42G239.74
tongue, adult.CNhs10499.32-1B438.54
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.08
urinary bladder, adult.CNhs10481.879-12E418.16
uterus, adult pregnant day19.CNhs10497.590-15F528.90
uterus, adult.CNhs10509.92-27E528.75
vagina, adult.CNhs10502.89-27D531.51
vesicular gland, adult.CNhs10491.51-27F824.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A179.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A266.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A375.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D768.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A464.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A582.34
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A689.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A779.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A891.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A987.50
whole body, embryo E11.CNhs11014.324-5I827.19
whole body, embryo E12.CNhs10587.857-27C926.34
whole body, embryo E13.CNhs10512.372-23H229.54
whole body, embryo E14.5.CNhs10578.420-27D230.87
whole body, embryo E14.CNhs10519.395-14B145.28
whole body, embryo E16.CNhs10514.453-14F245.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G531.77
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G531.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G534.47
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.06
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.91
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G527.82
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G529.09
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.99
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.75
whole body, embryo E17.5.CNhs10513.490-9F934.14
whole body, embryo E17.CNhs10517.475-3I548.96
whole body, embryo E18.CNhs10516.493-3B336.73
whole body, neonate N00.CNhs10525.657-19C233.95
whole body, neonate N01.CNhs10576.659-23C620.09
whole body, neonate N06.CNhs10515.692-21D128.02
whole body, neonate N10.CNhs10518.761-6B427.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.75e-0823
neuroblast (sensu Vertebrata)1.75e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.42e-1354
neural tube9.56e-1352
neural rod9.56e-1352
future spinal cord9.56e-1352
neural keel9.56e-1352
gray matter6.28e-1234
brain1.09e-1047
future brain1.09e-1047
regional part of brain1.96e-1046
brain grey matter3.62e-1029
regional part of telencephalon3.62e-1029
telencephalon3.62e-1029
anterior neural tube2.03e-0940
regional part of forebrain6.83e-0939
forebrain6.83e-0939
future forebrain6.83e-0939
central nervous system3.05e-0873
neurectoderm1.34e-0764
neural plate1.34e-0764
presumptive neural plate1.34e-0764
nervous system3.63e-0775
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