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FFCP PHASE1:Mm9::chr10:75384307..75384370,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:75384307..75384370,-
|DHSsupport=NA
|short_description=p1@Smarcb1
|DPIdataset=NA
|description=CAGE_peak_1_at_Smarcb1_5end
|association_with_transcript=0bp_to_ENSMUST00000000925,ENSMUST00000121304,ENSMUST00000140388,ENSMUST00000169174,NM_001161853,NM_011418,uc007ftm.2,uc007ftn.2,uc011xgt.1_5end
|EntrezGene=20587
|EntrezGene=20587
|HGNC=
|HGNC=
|MCL_coexpression_id=108
|TSSclassifier=NA
|UniProt=Q9Z0H3,D6RDC4,F6Y234,Q3UDA4,Q6ZWP4
|UniProt=Q9Z0H3,D6RDC4,F6Y234,Q3UDA4,Q6ZWP4
|association_with_transcript=0bp_to_ENSMUST00000000925,ENSMUST00000121304,ENSMUST00000140388,ENSMUST00000169174,NM_001161853,NM_011418,uc007ftm.2,uc007ftn.2,uc011xgt.1_5end
|cluster_id=chr10:75384307..75384370,-
|description=CAGE_peak_1_at_Smarcb1_5end
|id=chr10:75384307..75384370,-
|ontology_enrichment_celltype=CL:0000221!6.56e-16!44;CL:0000133!6.56e-16!44;CL:0002319!7.19e-16!43;CL:0000055!1.39e-15!50;CL:0000393!6.03e-14!39;CL:0000211!6.03e-14!39;CL:0000540!2.50e-13!33;CL:0000047!2.50e-13!33;CL:0000031!2.50e-13!33;CL:0000404!2.50e-13!33;CL:0000117!4.66e-10!23;CL:0000337!4.66e-10!23;CL:0002321!3.97e-08!70;CL:0000220!3.97e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000221,6.56e-16,44;CL:0000133,6.56e-16,44;CL:0002319,7.19e-16,43;CL:0000393,6.03e-14,39;CL:0000211,6.03e-14,39;CL:0000540,2.50e-13,33;CL:0000047,2.50e-13,33;CL:0000031,2.50e-13,33;CL:0000404,2.50e-13,33;CL:0000117,4.66e-10,23;CL:0000337,4.66e-10,23;CL:0002321,3.97e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.44e-21!73;UBERON:0005743!6.44e-21!73;UBERON:0000073!1.07e-19!75;UBERON:0001016!1.07e-19!75;UBERON:0004121!3.36e-17!102;UBERON:0000924!3.36e-17!102;UBERON:0006601!3.36e-17!102;UBERON:0002346!1.82e-15!71;UBERON:0003075!1.82e-15!71;UBERON:0007284!1.82e-15!71;UBERON:0001049!4.89e-13!52;UBERON:0005068!4.89e-13!52;UBERON:0006241!4.89e-13!52;UBERON:0007135!4.89e-13!52;UBERON:0003056!9.13e-13!49;UBERON:0000033!1.10e-11!63;UBERON:0003080!2.18e-11!40;UBERON:0002780!2.36e-11!39;UBERON:0001890!2.36e-11!39;UBERON:0006240!2.36e-11!39;UBERON:0000955!2.40e-11!50;UBERON:0006238!2.40e-11!50;UBERON:0002616!2.83e-11!49;UBERON:0002020!3.44e-11!34;UBERON:0000153!2.15e-09!94;UBERON:0002791!3.09e-09!29;UBERON:0003528!3.09e-09!29;UBERON:0001893!3.09e-09!29;UBERON:0007811!3.31e-08!86;UBERON:0000956!6.12e-07!21;UBERON:0001869!6.12e-07!21;UBERON:0000203!6.12e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.44e-21,73;UBERON:0001016,1.07e-19,75;UBERON:0004121,3.79e-17,95;UBERON:0000924,3.79e-17,95;UBERON:0006601,3.79e-17,95;UBERON:0002346,9.41e-16,64;UBERON:0003075,9.41e-16,64;UBERON:0007284,9.41e-16,64;UBERON:0000073,2.99e-13,54;UBERON:0010371,3.93e-13,73;UBERON:0001049,4.89e-13,52;UBERON:0005068,4.89e-13,52;UBERON:0006241,4.89e-13,52;UBERON:0007135,4.89e-13,52;UBERON:0003056,9.13e-13,49;UBERON:0000955,2.01e-11,47;UBERON:0006238,2.01e-11,47;UBERON:0003080,2.18e-11,40;UBERON:0002616,2.34e-11,46;UBERON:0002780,2.36e-11,39;UBERON:0001890,2.36e-11,39;UBERON:0006240,2.36e-11,39;UBERON:0002020,3.44e-11,34;UBERON:0010314,3.50e-10,92;UBERON:0003528,3.09e-09,29;UBERON:0002791,3.09e-09,29;UBERON:0001893,3.09e-09,29;UBERON:0000956,6.12e-07,21;UBERON:0001869,6.12e-07,21;UBERON:0000203,6.12e-07,21
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91.9003991413356,84.3521711818268,74.2263450851364,71.4045583450001,69.994595773722,58.9319139321645,55.4922597006143,49.5129197974649,38.5230374113894,65.9520738260503,93.2983247314428,116.648235772254,109.087116661011,104.877776663918,98.5014211611237,82.032709813382,79.0340616002777,70.9897761762062,63.2950396564136,50.4052510951265,61.3061574018666,129.946863000995,119.1447103112,88.3461596249006,88.9762677467383,78.4791351385996,65.9873017864629,62.6203595220207,61.1856686685775,62.9468222970299,61.8064514888832,53.7967501683433,56.668774726154,52.594605981706,45.5728071066575,63.7099686183566,60.2877116415677,60.2705772747042,50.8088632304661,55.7416952090011,69.5976172215607,64.953618860957,31.0974704501925,79.0652579663893,87.4617949363636,87.6530135562277,76.1309597782536,96.5966352876606,98.2012066606611,100.578352534539,91.4152042545168,81.5656336171568,96.8211782975903,148.208332350204,124.894785374523,122.586728931468,84.358030822698,112.562268331227,90.2671626489569,80.2310687363831,70.2579545184629,84.4017521226474,73.0294941997375,73.0020383683891,70.9235043611647,64.1444326168695,71.003894017,68.175901650313,64.2996483232149,71.6165134339207,63.6600427530227,66.7579159301357,63.0011378175221,72.3454122533226,73.4749837499657,62.9471541460927,66.2779659843418,61.7357535524569,71.1608852368999,79.3907402267833,74.7117980483474,68.4452733783143,67.8982148705863,72.248726037622,72.5978035107903,75.2985119432228,64.7635996157338,68.4818468983052,116.161918741145,78.8349520461026,58.6597977551854,53.752021311345,56.471403294596,52.1702630145948
|phase1_expression=82.6368051060737,31.4077866875425,22.7499619694768,20.8700305801713,23.5420993074783,48.1813510387124,49.2922671656559,54.6191658157868,14.5012383816217,15.6823232635736,43.1469279928273,45.2308141503557,33.7265437964475,43.8850420143367,52.298232605059,43.9371330235922,46.8706458345858,62.4615087409311,53.2004002390266,63.6584477697045,51.7913637020015,83.4043990087437,60.598351080233,52.9574919446176,49.3229954294416,27.563134277521,43.9377236082256,45.0334876313508,49.2160656392008,49.6499355627064,65.8539616646255,112.400429202355,86.7241350494244,110.937176710807,64.9916144440368,70.6497242773593,66.1508714290076,42.2716947044277,40.6294379152376,36.1231383341921,38.8232782100469,28.6879103682547,33.9857247121808,115.447382083604,99.6535233887828,105.539382492967,185.426748610485,127.980766795322,123.463634696773,91.5764824639875,105.689748327149,163.877923376068,47.3146949082817,36.9934692425786,32.601098516819,79.4931657351076,94.5560351797897,60.8493068887382,209.195220528824,223.234193252798,207.896700350027,143.331237065243,177.858959222228,88.6401221522178,106.797567157233,92.362414942993,171.371263216527,267.800158809124,171.398929145914,193.733521505976,220.6308844576,116.259950652348,109.771664852952,200.639929114095,160.637009426564,211.420320920305,78.182275509566,71.8879713419607,76.342447028353,212.732582108803,165.592634920361,203.677127887693,78.7296057183894,76.5357149643085,79.3022905961644,122.270862971572,99.2330615169747,143.900372177132,47.4803232199064,60.6839627657488,34.7837386442013,36.9982267101996,21.759082678648,47.4938808641279,33.1385972898311,35.3941240806895,42.4142148797891,141.457167739788,154.83245874331,150.522658741405,80.4215926924846,114.210564898743,127.402619853323,135.102673599133,55.638197539882,62.8332466378245,65.2126534069071,29.8019926066747,41.6889992671946,61.4550455728375,114.673800992416,102.300400712879,81.4072705313886,76.1149334790744,49.6224344112674,69.9962913706292,71.9337356107028,46.7055922851315,58.3842964286917,65.6773410786481,49.2476586166678,50.4270263260631,44.7340226923493,76.1230072230023,60.5300982690885,46.4931840479636,54.156436276676,47.3923157484792,48.7949671960568,79.389038884556,81.4351073017155,156.565322732629,77.0041738451785,72.3674744244835,71.8946634176078,81.4451140600143,71.796751514473,49.513974302817,51.302719962036,50.5060454127538,125.045745687158,153.344703657126,121.181813359,101.122932767765,82.800419467166,102.106635067025,99.4175297578723,62.8649190895808,145.077259243803,120.271466986733,125.101249280568,103.241189973388,90.6434032475449,77.311980967921,73.0526584248199,101.70651034425,45.6438571753603,47.3520149091076,58.2535173760965,80.1576739712392,77.6281258537428,68.6036454166467,77.8890180075342,68.8674811115913,68.4945981219959,59.0636219666036,55.5325940897212,38.4157976387988,55.6212292707564,47.4443971188585,35.9945514383599,35.2341969695051,41.7145219052996,29.1227928710007,73.8117719460087,125.13200865321,35.3548097792664,53.947915599363,124.347050062041,110.776892477429,84.4081871659711,77.8498405046102,63.1553644519432,68.8616766527464,53.1472548929853,48.4214926888592,55.7964163536598,41.5819026566005,49.5208781282565,54.8279839279075,49.2794753714303,37.8368419183298,130.681183756673,106.136868214438,98.05573003558,97.5489860379055,88.4423341484373,68.3122885731703,64.4380313296182,37.0501471428801,45.3726323461573,43.4358017004738,26.0878311836691,80.9198762723056,82.7513369426585,74.8790834241563,71.6096228501415,74.7649195232492,60.8555785757593,48.3329510917362,28.3736646856312,60.1289494881898,41.6927798929328,50.6111688829165,62.7195722960267,49.2528811996868,45.7463404480876,30.8763853672555,53.9479315286486,126.011788827372,105.764269710875,104.223482665966,97.1617627914399,92.2959478504405,76.1739650835244,66.930841215225,74.8766934504407,62.2315777913058,75.9004698809639,54.5664838003408,59.0582637981363,48.8913818005509,63.3323392544944,53.3027570142335,36.8823204764277,31.1808523324348,71.6055631345552,58.840266669286,80.328123234571,21.9649706667804,111.689909673355,113.617674590322,114.605247593849,117.333679794703,118.083297263669,116.061377623421,110.513321557246,107.257899853451,94.4737789292191,80.00900778903,83.3188300172537,112.181330310371,71.1816012375128,63.5134973444262,23.8941249011933,121.390318077491,92.8133319881786,60.1650204421315,73.8254732201932,52.8788454463555,46.0002361839434,59.9830653637884,60.9610517037873,41.4008152895919,33.7339547439996,22.6898195146011,68.0879211507576,132.885087395107,153.936833701478,127.744872878829,93.4583031294782,106.307815290834,101.855843752713,87.9903702941192,72.0442143755591,62.7022929756908,37.7103560673985,47.8170133530292,60.7106244376605,65.0776459974802,75.6820660979885,75.9972365819634,50.4261847369642,63.7863038916153,60.1465500408441,84.412228996958,71.299893037339,70.6381713767591,57.4115756428306,70.0061210011959,53.3732270180706,54.1612120492556,49.6137905957881,45.8241896647254,122.738365509481,91.9003991413356,84.3521711818268,74.2263450851364,71.4045583450001,69.994595773722,58.9319139321645,55.4922597006143,49.5129197974649,38.5230374113894,65.9520738260503,93.2983247314428,116.648235772254,109.087116661011,104.877776663918,98.5014211611237,82.032709813382,79.0340616002777,70.9897761762062,63.2950396564136,50.4052510951265,61.3061574018666,129.946863000995,119.1447103112,88.3461596249006,88.9762677467383,78.4791351385996,65.9873017864629,62.6203595220207,61.1856686685775,62.9468222970299,61.8064514888832,53.7967501683433,56.668774726154,52.594605981706,45.5728071066575,63.7099686183566,60.2877116415677,60.2705772747042,50.8088632304661,55.7416952090011,69.5976172215607,64.953618860957,31.0974704501925,79.0652579663893,87.4617949363636,87.6530135562277,76.1309597782536,96.5966352876606,98.2012066606611,100.578352534539,91.4152042545168,81.5656336171568,96.8211782975903,148.208332350204,124.894785374523,122.586728931468,84.358030822698,112.562268331227,90.2671626489569,80.2310687363831,70.2579545184629,84.4017521226474,73.0294941997375,73.0020383683891,70.9235043611647,64.1444326168695,71.003894017,68.175901650313,64.2996483232149,71.6165134339207,63.6600427530227,66.7579159301357,63.0011378175221,72.3454122533226,73.4749837499657,62.9471541460927,66.2779659843418,61.7357535524569,71.1608852368999,79.3907402267833,74.7117980483474,68.4452733783143,67.8982148705863,72.248726037622,72.5978035107903,75.2985119432228,64.7635996157338,68.4818468983052,116.161918741145,78.8349520461026,58.6597977551854,53.752021311345,56.471403294596,52.1702630145948
|short_description=p1@Smarcb1
}}
}}

Latest revision as of 07:17, 26 September 2015

Short description:p1@Smarcb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smarcb1_5end
Coexpression cluster:MCL_coexpression_mm9:108
Association with transcript: 0bp_to_ENSMUST00000000925, ENSMUST00000121304, ENSMUST00000140388, ENSMUST00000169174, NM_001161853, NM_011418, uc007ftm.2, uc007ftn.2, uc011xgt.1_5end
EntrezGene:Smarcb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smarcb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G782.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I531.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I622.75
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.87
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I748.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I849.29
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E954.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E643.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F145.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.73
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E843.89
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A152.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A343.94
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A546.87
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A262.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A453.20
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A663.66
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A351.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H283.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I960.60
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D152.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D249.32
GP2+ M cell, pool1.CNhs13228.11845-124H927.56
GP2+ M cell, pool2.CNhs13231.11846-124I143.94
GP2+ M cell, pool3.CNhs13240.11847-124I245.03
Ileum epithelium, pool1.CNhs13199.10252-104B949.22
Ileum epithelium, pool2.CNhs13232.10253-104C149.65
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C865.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3112.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G686.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9110.94
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F564.99
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F670.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F766.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G842.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H140.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H336.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G938.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8115.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D999.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3105.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7185.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2127.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8123.46
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C391.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C4105.69
Mouse Astrocytes, donor3.CNhs12107.11633-122C4163.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A247.31
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A132.60
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C179.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E194.56
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C560.85
Mouse Granule cells, donor1.CNhs12131.11713-123C3209.20
Mouse Granule cells, donor2.CNhs12357.11731-123E3223.23
Mouse Granule cells, donor3.CNhs12108.11636-122C7207.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6143.33
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1177.86
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C788.64
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7106.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D292.36
Mouse Microglia, donor1.CNhs12629.11718-123C8171.37
Mouse Microglia, donor2.CNhs12634.11736-123E8267.80
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5171.40
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5193.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9220.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1116.26
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5109.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2200.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2160.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6211.42
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D378.18
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F371.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D776.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4212.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4165.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8203.68
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E478.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E576.54
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I679.30
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6122.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F699.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1143.90
Mouse Schwann, donor1.CNhs12507.11728-123D947.48
Mouse Schwann, donor2.CNhs12573.11746-123F960.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C847.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F635.39
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A742.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7141.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3154.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8150.52
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G680.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1114.21
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8127.40
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6135.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G155.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G262.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G365.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B629.80
accessory axillary lymph node, adult.CNhs10475.1063-29H941.69
adrenal gland, adult.CNhs10508.49-24D761.46
adrenal gland, embryo E14.CNhs11038.406-44C5114.67
adrenal gland, embryo E16.CNhs11004.1254-43D6102.30
adrenal gland, embryo E17.CNhs11043.1263-45I181.41
adrenal gland, embryo E18.CNhs11026.1262-18F576.11
adrenal gland, neonate N00.CNhs11191.1311-23C149.62
adrenal gland, neonate N25.CNhs11223.1377-27I370.00
amnion, adult pregnant day17.5.CNhs10488.583-22A871.93
aorta, adult.CNhs10498.46-23H146.71
bone (os femoris), adult.CNhs10483.56-12G258.38
bone (os femoris), neonate N02.CNhs11227.1985-43F565.68
bone (os femoris), neonate N16.CNhs11225.1525-43A649.25
bone (os femoris), neonate N20.CNhs11195.1350-25C350.43
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B276.12
cerebellum, neonate N30.CNhs11135.1395-42I260.53
colon, adult.CNhs10468.36-18H746.49
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C754.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D147.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D448.79
corpora quadrigemina, adult.CNhs10501.16-22A479.39
corpus striatum, adult.CNhs10487.19-21D881.44
corpus striatum, neonate N00.CNhs11226.630-43F1156.57
cortex, adult.CNhs10473.12-14D577.00
cortex, neonate N30.CNhs11107.1392-42F272.37
diencephalon, adult.CNhs10482.20-12F271.89
diencephalon, neonate N30.CNhs11201.1388-42B281.45
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B171.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A249.51
epididymis, adult.CNhs10490.58-23B251.30
eyeball, adult.CNhs10484.31-12G450.51
eyeball, embryo E12.CNhs11016.345-16C6125.05
eyeball, embryo E14.CNhs10521.399-16E2153.34
eyeball, embryo E15.CNhs10593.426-16C9121.18
eyeball, embryo E17.CNhs11023.1261-18D4101.12
eyeball, neonate N00.CNhs11207.633-15C682.80
eyeball, neonate N01.CNhs11140.1532-43E7102.11
eyeball, neonate N02.CNhs11205.1551-44G899.42
eyeball, neonate N16.CNhs11188.777-19A262.86
forelimb, embryo E11.CNhs10596.335-25E2145.08
forelimb, embryo E12.CNhs10600.359-14H2120.27
forelimb, embryo E13.CNhs10589.384-1E2125.10
forelimb, embryo E14.CNhs10577.413-26A8103.24
forelimb, embryo E15.CNhs11007.437-20E790.64
forelimb, embryo E17.CNhs10598.1517-43C477.31
forelimb, embryo E18.CNhs11008.1520-43B573.05
gonad, embryo E13.CNhs11044.1564-45I6101.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C845.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D247.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D558.25
heart, embryo E11.CNhs10586.331-24E980.16
heart, embryo E12.CNhs11015.353-12F577.63
heart, embryo E13.CNhs11013.376-3I968.60
heart, embryo E14.CNhs10597.403-26D477.89
heart, embryo E15.CNhs11017.431-16C868.87
heart, embryo E16.CNhs11021.457-17C668.49
heart, embryo E17.CNhs11025.479-18E559.06
heart, embryo E18.CNhs11030.1283-20G355.53
heart, neonate N00.CNhs11213.639-21E338.42
heart, neonate N03.CNhs11221.1349-25I255.62
heart, neonate N10.CNhs11118.749-24G147.44
heart, neonate N16.CNhs11209.782-15G135.99
heart, neonate N20.CNhs11127.821-26I635.23
heart, neonate N25.CNhs11196.1351-25D341.71
heart, neonate N30.CNhs11202.1390-42D229.12
hippocampus, adult.CNhs10478.13-16E873.81
hippocampus, neonate N00.CNhs11228.627-43G1125.13
intestinal mucosa, adult.CNhs10506.860-29I335.35
intestine, adult.CNhs10496.178-9A353.95
intestine, embryo E12.CNhs11019.1251-16I5124.35
intestine, embryo E13.CNhs11010.381-16D5110.78
intestine, embryo E15.CNhs10602.976-16D884.41
intestine, embryo E16.CNhs10585.463-22H477.85
intestine, embryo E17.CNhs10582.482-18D363.16
intestine, embryo E18.CNhs10526.1289-20F768.86
intestine, neonate N00.CNhs11126.644-26D153.15
intestine, neonate N01.CNhs11192.1322-23E948.42
intestine, neonate N06.CNhs11102.688-20B855.80
intestine, neonate N07.CNhs11095.720-20F241.58
intestine, neonate N10.CNhs11098.755-23A549.52
intestine, neonate N20.CNhs11187.827-18D154.83
intestine, neonate N25.CNhs11121.1352-25E349.28
intestine, neonate N30.CNhs11131.1384-42G137.84
kidney, embryo E14.CNhs10606.411-4I9130.68
kidney, embryo E15.CNhs10997.434-16F8106.14
kidney, embryo E16.CNhs10584.464-22A598.06
kidney, embryo E17.CNhs11028.483-18I297.55
kidney, embryo E18.CNhs11001.1288-20C788.44
kidney, neonate N00.CNhs11214.646-21G768.31
kidney, neonate N10.CNhs11206.758-6D564.44
kidney, neonate N20.CNhs11113.832-19I137.05
kidney, neonate N25.CNhs11122.1353-25F345.37
kidney, neonate N30.CNhs11203.1385-42H143.44
liver, adult pregnant day01.CNhs10466.508-5B226.09
liver, embryo E12.CNhs10601.355-15F880.92
liver, embryo E13.CNhs10524.378-3H682.75
liver, embryo E14.CNhs10594.409-16E174.88
liver, embryo E15.CNhs10520.433-16D771.61
liver, embryo E16.CNhs10523.462-17F574.76
liver, embryo E17.CNhs10510.481-18A360.86
liver, embryo E18.CNhs10579.499-43G448.33
liver, neonate N00.CNhs11117.641-24F428.37
liver, neonate N03.CNhs11123.1345-25G260.13
liver, neonate N06.CNhs11101.684-20A841.69
liver, neonate N07.CNhs11103.716-20H250.61
liver, neonate N10.CNhs11115.751-24B962.72
liver, neonate N20.CNhs11220.823-25A349.25
liver, neonate N25.CNhs11198.1368-26H145.75
liver, neonate N30.CNhs11106.1382-42D130.88
lung, adult.CNhs10474.28-22B153.95
lung, embryo E12.CNhs10522.354-16G2126.01
lung, embryo E14.CNhs10604.404-26F8105.76
lung, embryo E15.CNhs11020.432-17C5104.22
lung, embryo E16.CNhs10998.458-17B697.16
lung, embryo E17.CNhs10605.480-44A692.30
lung, embryo E18.CNhs10583.1287-20I676.17
lung, neonate N00.CNhs11224.640-42C666.93
lung, neonate N06.CNhs11212.683-20E574.88
lung, neonate N07.CNhs11111.715-19A362.23
lung, neonate N10.CNhs11219.750-23E675.90
lung, neonate N20.CNhs11109.822-18A454.57
lung, neonate N25.CNhs11119.1359-25C759.06
lung, neonate N30.CNhs11133.1394-42H248.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A163.33
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A153.30
mammary gland, adult lactating day02.CNhs10480.595-22B636.88
mammary gland, adult pregnant day19.CNhs10476.588-5H231.18
medulla oblongata, adult.CNhs10477.17-12C271.61
medulla oblongata, neonate N30.CNhs11200.1396-42A358.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C780.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1111.69
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2113.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3114.61
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7117.33
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8118.08
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9116.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4110.51
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5107.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D694.47
olfactory brain, adult.CNhs10489.18-22I980.01
ovary, adult.CNhs10507.91-2I783.32
ovary, embryo E18.CNhs11040.505-44H7112.18
ovary, neonate N00.CNhs11217.1299-22I471.18
oviduct, adult pregnant day01.CNhs10500.988-6G663.51
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F4121.39
pancreas, embryo E15.CNhs11042.1556-45F292.81
pancreas, embryo E16.CNhs11003.460-26E560.17
pancreas, embryo E17.CNhs10599.1558-45G373.83
pancreas, embryo E18.CNhs10580.1535-43I752.88
pancreas, neonate N00.CNhs11105.645-26G946.00
pancreas, neonate N01.CNhs11138.1531-43D759.98
pancreas, neonate N02.CNhs11139.1539-43D860.96
pancreas, neonate N16.CNhs11136.787-43B641.40
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G868.09
pituitary gland, embryo E12.CNhs11018.346-16E6132.89
pituitary gland, embryo E13.CNhs11009.370-44C7153.94
pituitary gland, embryo E14.CNhs11037.398-44A5127.74
pituitary gland, embryo E15.CNhs10592.427-16B993.46
pituitary gland, embryo E16.CNhs11036.449-43F6106.31
pituitary gland, embryo E17.CNhs11039.1265-44F5101.86
pituitary gland, neonate N00.CNhs11190.1308-22E987.99
placenta, adult pregnant day10.CNhs10472.539-13I772.04
placenta, adult pregnant day17.CNhs10464.577-18G362.70
prostate, adult.CNhs10470.859-1F837.71
skin, adult.CNhs10492.30-1C347.82
skin, neonate N00.CNhs11124.650-25G460.71
skin, neonate N03.CNhs11215.662-22H365.08
skin, neonate N06.CNhs11097.693-20I575.68
skin, neonate N10.CNhs11108.762-6C476.00
small intestine, neonate N16.CNhs11114.790-21I150.43
spinal cord, adult.CNhs10505.24-13C963.79
spleen, adult.CNhs10465.25-2G260.15
spleen, embryo E16.CNhs11035.461-43C184.41
spleen, embryo E18.CNhs11011.1271-21F271.30
spleen, neonate N10.CNhs11116.752-24D170.64
spleen, neonate N20.CNhs11112.824-19H157.41
spleen, neonate N25.CNhs11099.1354-25G370.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C653.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C954.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.61
stomach, adult.CNhs10503.33-1H645.82
stomach, embryo E12.CNhs10588.356-43E3122.74
stomach, embryo E15.CNhs10603.1252-16G891.90
stomach, embryo E16.CNhs11022.459-17D484.35
stomach, embryo E17.CNhs11006.1035-18D574.23
stomach, embryo E18.CNhs10999.1286-20C671.40
stomach, neonate N03.CNhs11193.1340-24B869.99
stomach, neonate N07.CNhs11210.718-18A958.93
stomach, neonate N25.CNhs11104.1355-25E455.49
stomach, neonate N30.CNhs11134.1386-42I149.51
submandibular gland, adult.CNhs10469.59-29C138.52
testis, adult.CNhs10504.57-7G565.95
testis, embryo E13.CNhs11031.389-23F593.30
testis, embryo E15.CNhs11034.443-27C5116.65
testis, embryo E16.CNhs11033.470-26G5109.09
testis, embryo E17.CNhs11029.486-18I5104.88
testis, embryo E18.CNhs11027.503-18G598.50
testis, neonate N00.CNhs11189.1300-22B782.03
testis, neonate N07.CNhs11222.726-26I479.03
testis, neonate N10.CNhs11204.763-44D970.99
testis, neonate N20.CNhs11110.839-18H363.30
testis, neonate N30.CNhs11130.1391-42E250.41
thymus, adult.CNhs10471.38-12B561.31
thymus, embryo E14.CNhs11041.402-44I4129.95
thymus, embryo E15.CNhs11005.430-45I2119.14
thymus, embryo E16.CNhs11002.456-26C588.35
thymus, embryo E17.CNhs10581.478-18C188.98
thymus, embryo E18.CNhs10595.1273-19G478.48
thymus, neonate N02.CNhs11181.1541-43F865.99
thymus, neonate N03.CNhs11137.2104-43C762.62
thymus, neonate N06.CNhs11197.681-26C461.19
thymus, neonate N07.CNhs11211.713-19D362.95
thymus, neonate N10.CNhs11194.748-24E461.81
thymus, neonate N20.CNhs11186.820-7A253.80
thymus, neonate N25.CNhs11125.1362-25G756.67
thymus, neonate N30.CNhs11132.1393-42G252.59
tongue, adult.CNhs10499.32-1B445.57
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H363.71
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F760.29
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G560.27
urinary bladder, adult.CNhs10481.879-12E450.81
uterus, adult pregnant day19.CNhs10497.590-15F555.74
uterus, adult.CNhs10509.92-27E569.60
vagina, adult.CNhs10502.89-27D564.95
vesicular gland, adult.CNhs10491.51-27F831.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A179.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A287.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A387.65
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D776.13
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A496.60
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A598.20
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6100.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A791.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A881.57
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A996.82
whole body, embryo E11.CNhs11014.324-5I8148.21
whole body, embryo E12.CNhs10587.857-27C9124.89
whole body, embryo E13.CNhs10512.372-23H2122.59
whole body, embryo E14.5.CNhs10578.420-27D284.36
whole body, embryo E14.CNhs10519.395-14B1112.56
whole body, embryo E16.CNhs10514.453-14F290.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G580.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G570.26
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G584.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G573.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G573.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G570.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G564.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G571.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G568.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G564.30
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G571.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G563.66
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G566.76
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G563.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G572.35
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G573.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G562.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G566.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G561.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G571.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G579.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G574.71
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G568.45
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G567.90
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G572.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G572.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G575.30
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G564.76
whole body, embryo E17.5.CNhs10513.490-9F968.48
whole body, embryo E17.CNhs10517.475-3I5116.16
whole body, embryo E18.CNhs10516.493-3B378.83
whole body, neonate N00.CNhs10525.657-19C258.66
whole body, neonate N01.CNhs10576.659-23C653.75
whole body, neonate N06.CNhs10515.692-21D156.47
whole body, neonate N10.CNhs10518.761-6B452.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell6.56e-1644
neurectodermal cell6.56e-1644
neural cell7.19e-1643
electrically responsive cell6.03e-1439
electrically active cell6.03e-1439
neuron2.50e-1333
neuronal stem cell2.50e-1333
neuroblast2.50e-1333
electrically signaling cell2.50e-1333
CNS neuron (sensu Vertebrata)4.66e-1023
neuroblast (sensu Vertebrata)4.66e-1023
embryonic cell3.97e-0870

Uber anatomy
Ontology termp-valuen
central nervous system6.44e-2173
nervous system1.07e-1975
ectoderm-derived structure3.79e-1795
ectoderm3.79e-1795
presumptive ectoderm3.79e-1795
neurectoderm9.41e-1664
neural plate9.41e-1664
presumptive neural plate9.41e-1664
regional part of nervous system2.99e-1354
ecto-epithelium3.93e-1373
neural tube4.89e-1352
neural rod4.89e-1352
future spinal cord4.89e-1352
neural keel4.89e-1352
pre-chordal neural plate9.13e-1349
brain2.01e-1147
future brain2.01e-1147
anterior neural tube2.18e-1140
regional part of brain2.34e-1146
regional part of forebrain2.36e-1139
forebrain2.36e-1139
future forebrain2.36e-1139
gray matter3.44e-1134
structure with developmental contribution from neural crest3.50e-1092
brain grey matter3.09e-0929
regional part of telencephalon3.09e-0929
telencephalon3.09e-0929
cerebral cortex6.12e-0721
cerebral hemisphere6.12e-0721
pallium6.12e-0721
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