Personal tools

FFCP PHASE1:Mm9::chr17:34272526..34272616,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14998
|EntrezGene=14998
|HGNC=
|HGNC=
|MCL_coexpression_id=1643
|TSSclassifier=NA
|UniProt=Q31621
|UniProt=Q31621
|association_with_transcript=0bp_to_NM_010386_5end
|association_with_transcript=0bp_to_NM_010386_5end
|cluster_id=chr17:34272526..34272616,+
|description=CAGE_peak_1_at_H2-DMa_5end
|description=CAGE_peak_1_at_H2-DMa_5end
|id=chr17:34272526..34272616,+
|id=chr17:34272526..34272616,+
|ontology_enrichment_celltype=CL:0000049!2.49e-07!19;CL:0000988!4.70e-07!32;CL:0002032!4.70e-07!32;CL:0000037!4.70e-07!32;CL:0000566!4.70e-07!32;CL:0000837!4.70e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000049,1.91e-07,19;CL:0000988,3.73e-07,32;CL:0002032,3.73e-07,32;CL:0000037,3.73e-07,32;CL:0000837,3.73e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!6.18e-14!48;UBERON:0002390!2.62e-12!45;UBERON:0003061!2.62e-12!45;UBERON:0002405!2.67e-10!70;UBERON:0001474!8.75e-10!22;UBERON:0004765!8.75e-10!22;UBERON:0001434!8.75e-10!22;UBERON:0002371!1.58e-09!16;UBERON:0007023!1.06e-08!51;UBERON:0000344!2.75e-07!15;UBERON:0001007!2.88e-07!128;UBERON:0001555!2.88e-07!128;UBERON:0007026!2.88e-07!128;UBERON:0004119!9.47e-07!130;UBERON:0000925!9.47e-07!130;UBERON:0006595!9.47e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.60e-14,48;UBERON:0002405,3.60e-14,48;UBERON:0002390,1.57e-12,45;UBERON:0003061,1.57e-12,45;UBERON:0001474,8.37e-10,22;UBERON:0004765,8.37e-10,22;UBERON:0001434,8.37e-10,22;UBERON:0002371,1.51e-09,16;UBERON:0007023,9.44e-09,51;UBERON:0001007,1.04e-08,116;UBERON:0001555,1.04e-08,116;UBERON:0007026,1.04e-08,116;UBERON:0004119,4.22e-08,118;UBERON:0000925,4.22e-08,118;UBERON:0006595,4.22e-08,118;UBERON:0004921,5.38e-08,114;UBERON:0000344,2.66e-07,15
|phase1_expression=7.68714466103011,28.2670080187882,10.4649825059593,59.8879138387523,55.5994260240445,7.05092942029937,13.5495331545405,26.0829113351984,5.34997144176334,3.27690336850791,0.34243593645101,1.11681022593471,30.816131387617,12.5011175459166,54.296891175953,81.8000080254897,33.578970150151,460.10156817499,389.130762573087,391.287258957784,22.8766450506378,68.3121744262091,75.2255392720134,66.3968554592638,67.446328633748,32.7312219545562,29.7225777349762,25.6410766896208,159.619672343354,180.20154277835,45.0112936630269,3.81018404075779,3.07532393792285,0,70.479795219311,83.1173226792462,67.5800569228442,22.600708059793,60.9441568728564,22.5115209908733,9.41170380849623,12.9778642142105,24.2755176515577,1.6366586336825,0.811015449756117,0.550640256485045,5.47673941043627,2.39827672018491,4.61340983742391,3.11087838518853,3.07970127575798,1.43752564364972,493.784209627918,15.2326049822382,33.6093799142464,1.54355661621568,0.573066879877513,0,1.01158230429799,1.05798195854407,0.633831403506179,5.08266798103698,0.889294796111139,63.8928799269793,121.630562595738,103.019616667185,16.1784059679939,19.2109152660777,0.414758449233911,0.540023753326763,0.210324961351382,4.85606673486466,7.50953039235486,0.734944795289724,0.670918297127655,0,0,2.80912143787413,3.22573719838111,2.2420668914133,1.82975287204819,1.56274011167028,1.95428099300967,4.50210088025344,4.88954392885792,3.53554302568401,4.9830088279686,1.86399445825301,3.3319525066601,0.755715601067855,1.44932244350839,24.9522924324602,0,0.539703191637817,3.24888208723835,2.24013443548668,17.9768857768642,15.3387290320252,9.09251016110041,9.18682893726885,19.7180787687353,7.69958864485907,0,0,0,0.253359865475099,0,25.2346374179123,279.135038571651,38.2980718787248,2.25530924795977,2.43572382649713,0.691846491768175,1.05505848386836,1.17588707135705,5.27799683584637,0.247194967734374,31.8118585223806,51.3074120130927,5.82360659810673,12.5879665522424,13.5765070877862,22.3670113461747,2.34224637609238,1.25668024088073,158.383374229327,184.275661490105,182.370430221996,188.699287203501,3.59497534571574,11.8950156732843,2.51308704225729,10.2556348913443,7.67146371990992,6.02585329222724,8.11206315338788,1.42575109390443,23.2641035040874,33.1066813548114,6.31325567659422,0.650602214813519,0.919608417733892,1.0803727788321,1.35634336052144,0.95251098811859,1.2811372028485,1.03071897015702,3.88055056108524,1.29340795759705,0.567318240503458,1.93546236580344,3.72632745126877,2.50242524303038,3.83077383174383,5.55611768301447,1.59227413454795,136.229358338768,118.380037272769,94.9106087981279,0.207125772535502,0.469052119962192,0.180062061461015,1.65721314909647,1.57411385397923,1.23413690309903,0.232533944750408,1.07309360559848,1.05088808130453,0.822799249567402,2.46251196118643,3.08061476274252,3.94739966048397,7.46470391989572,6.03928884421673,12.4071069652835,1.74937841044784,194.286244394473,15.073682299822,0.426576501070468,1.16118335930219,2.44848176511977,3.63030344322017,7.33847544688072,7.98947629672748,19.9302205848695,8.56434564564857,11.8127548136127,13.9269530428806,15.4021628824105,12.5834717211591,20.533114738096,19.1175622324193,3.41402221715547,3.42745537829186,7.88954149711563,4.88763186828754,5.62462212786115,4.69909993265134,7.46191138066236,8.70899873079653,9.73392112616524,11.105744752962,14.2297261001831,2.00214126859313,0.589676985339609,3.14806957338795,4.86864291332407,6.51178331331525,4.32863948028414,5.17853047411459,8.2688965655268,8.78596522201861,8.62609239164127,24.5613025461212,17.4741096944154,6.56705082662491,6.81710171383266,14.473305640901,108.080616247464,1.70542270593436,1.95557971730431,3.05541154395339,4.45911471748154,5.02518772325447,8.56957107189649,5.65887578787617,19.2314875809553,21.4820748959312,23.9182152986231,52.4362607090362,62.1665934717224,52.5076082650887,107.061811596883,97.359117403549,27.047035016047,33.6642830491774,5.29816946959713,3.28192722458169,1.3114795630134,7.82659874333556,1.57754109708128,0.780877488593277,0,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,4.17717711348349,16.890870139784,1.42452482933804,2.44330439030364,22.9308470931824,18.5843193675948,0.242780636154981,1.51161778482376,1.32023555829129,3.2483208216885,3.07435147943927,4.9101375701962,2.90826983582004,2.49548164869305,10.1131762539461,8.4334886859999,6.18813259489121,5.44703369206061,1.98067203434441,1.81102157295856,1.92903331528433,3.01478397191865,3.74574516964348,3.29098041204242,2.43571959291679,1.64270195644597,1.48282449604674,9.2621927183084,33.307023094179,5.00539722757307,5.12659861889325,9.19167048824151,12.4747083806247,24.1929094402776,6.48988557036784,108.844751068232,9.70018279427146,9.4449208958553,40.1224813419992,61.6490967021823,84.1903677400003,197.51493565286,206.848246534367,189.886764007278,24.821436068393,0.316335993581135,2.23651413839534,2.05210147561422,1.88179466413022,2.62035076495413,1.48350781023303,8.84391976261094,8.11443420150492,13.0911123024711,36.6590194721286,2.81846469342095,0.598066184175915,0.992750942742586,1.75006069509643,3.48731523389874,2.53434188236167,1.87771581833206,1.8228613878153,1.99232754408851,2.65742532908607,2.59227005632079,81.53086912207,27.5706292794623,39.9545623371178,36.2479096108048,32.5828586114816,37.1534133440965,37.0201984521504,30.7194216523121,28.068673085585,35.1313378679549,36.1966004641257,43.2712990484501,35.5021695652816,49.4389296228037,9.9761368790693,2.21985953374065,0.986852422704233,0.335769232728157,23.9555096599916,20.0820248732765,15.9341913112521,12.0046292284277,20.5644562654499,7.90652579663893,7.36520378411483,12.6037012956667,7.56154002312225,5.48066015816514,4.5323633843382,6.75022500231806,9.00642406448441,4.98456649882625,8.28416498802912,0.103787347584177,0.798049746802062,2.39027048055788,2.18796045361465,1.67690530102386,1.2869045591501,2.00022055021454,2.26638562962784,2.24643446714271,2.02157769411038,2.28131369901216,3.77252682772152,2.06011316433741,2.94515701062399,3.33125719942557,4.28664322154766,2.0859178670074,2.50781986602817,1.64834360321323,2.35518272215036,1.37147700954166,2.8396128985494,2.38436189947321,2.0348498328526,2.4468438907986,1.94613598150856,1.82927972872773,1.05227884575137,3.25929873230068,3.36685362994643,1.89816028998679,2.1670986122624,3.27384834535751,1.23949472948773,3.47231899766054,3.99696924700713,4.21076895201735,3.86767897286937,3.63447830930802,12.1325280515734,9.27471342481686
|phase1_expression=7.68714466103011,28.2670080187882,10.4649825059593,59.8879138387523,55.5994260240445,7.05092942029937,13.5495331545405,26.0829113351984,5.34997144176334,3.27690336850791,0.34243593645101,1.11681022593471,30.816131387617,12.5011175459166,54.296891175953,81.8000080254897,33.578970150151,460.10156817499,389.130762573087,391.287258957784,22.8766450506378,68.3121744262091,75.2255392720134,66.3968554592638,67.446328633748,32.7312219545562,29.7225777349762,25.6410766896208,159.619672343354,180.20154277835,45.0112936630269,3.81018404075779,3.07532393792285,0,70.479795219311,83.1173226792462,67.5800569228442,22.600708059793,60.9441568728564,22.5115209908733,9.41170380849623,12.9778642142105,24.2755176515577,1.6366586336825,0.811015449756117,0.550640256485045,5.47673941043627,2.39827672018491,4.61340983742391,3.11087838518853,3.07970127575798,1.43752564364972,493.784209627918,15.2326049822382,33.6093799142464,1.54355661621568,0.573066879877513,0,1.01158230429799,1.05798195854407,0.633831403506179,5.08266798103698,0.889294796111139,63.8928799269793,121.630562595738,103.019616667185,16.1784059679939,19.2109152660777,0.414758449233911,0.540023753326763,0.210324961351382,4.85606673486466,7.50953039235486,0.734944795289724,0.670918297127655,0,0,2.80912143787413,3.22573719838111,2.2420668914133,1.82975287204819,1.56274011167028,1.95428099300967,4.50210088025344,4.88954392885792,3.53554302568401,4.9830088279686,1.86399445825301,3.3319525066601,0.755715601067855,1.44932244350839,24.9522924324602,0,0.539703191637817,3.24888208723835,2.24013443548668,17.9768857768642,15.3387290320252,9.09251016110041,9.18682893726885,19.7180787687353,7.69958864485907,0,0,0,0.253359865475099,0,25.2346374179123,279.135038571651,38.2980718787248,2.25530924795977,2.43572382649713,0.691846491768175,1.05505848386836,1.17588707135705,5.27799683584637,0.247194967734374,31.8118585223806,51.3074120130927,5.82360659810673,12.5879665522424,13.5765070877862,22.3670113461747,2.34224637609238,1.25668024088073,158.383374229327,184.275661490105,182.370430221996,188.699287203501,3.59497534571574,11.8950156732843,2.51308704225729,10.2556348913443,7.67146371990992,6.02585329222724,8.11206315338788,1.42575109390443,23.2641035040874,33.1066813548114,6.31325567659422,0.650602214813519,0.919608417733892,1.0803727788321,1.35634336052144,0.95251098811859,1.2811372028485,1.03071897015702,3.88055056108524,1.29340795759705,0.567318240503458,1.93546236580344,3.72632745126877,2.50242524303038,3.83077383174383,5.55611768301447,1.59227413454795,136.229358338768,118.380037272769,94.9106087981279,0.207125772535502,0.469052119962192,0.180062061461015,1.65721314909647,1.57411385397923,1.23413690309903,0.232533944750408,1.07309360559848,1.05088808130453,0.822799249567402,2.46251196118643,3.08061476274252,3.94739966048397,7.46470391989572,6.03928884421673,12.4071069652835,1.74937841044784,194.286244394473,15.073682299822,0.426576501070468,1.16118335930219,2.44848176511977,3.63030344322017,7.33847544688072,7.98947629672748,19.9302205848695,8.56434564564857,11.8127548136127,13.9269530428806,15.4021628824105,12.5834717211591,20.533114738096,19.1175622324193,3.41402221715547,3.42745537829186,7.88954149711563,4.88763186828754,5.62462212786115,4.69909993265134,7.46191138066236,8.70899873079653,9.73392112616524,11.105744752962,14.2297261001831,2.00214126859313,0.589676985339609,3.14806957338795,4.86864291332407,6.51178331331525,4.32863948028414,5.17853047411459,8.2688965655268,8.78596522201861,8.62609239164127,24.5613025461212,17.4741096944154,6.56705082662491,6.81710171383266,14.473305640901,108.080616247464,1.70542270593436,1.95557971730431,3.05541154395339,4.45911471748154,5.02518772325447,8.56957107189649,5.65887578787617,19.2314875809553,21.4820748959312,23.9182152986231,52.4362607090362,62.1665934717224,52.5076082650887,107.061811596883,97.359117403549,27.047035016047,33.6642830491774,5.29816946959713,3.28192722458169,1.3114795630134,7.82659874333556,1.57754109708128,0.780877488593277,0,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,4.17717711348349,16.890870139784,1.42452482933804,2.44330439030364,22.9308470931824,18.5843193675948,0.242780636154981,1.51161778482376,1.32023555829129,3.2483208216885,3.07435147943927,4.9101375701962,2.90826983582004,2.49548164869305,10.1131762539461,8.4334886859999,6.18813259489121,5.44703369206061,1.98067203434441,1.81102157295856,1.92903331528433,3.01478397191865,3.74574516964348,3.29098041204242,2.43571959291679,1.64270195644597,1.48282449604674,9.2621927183084,33.307023094179,5.00539722757307,5.12659861889325,9.19167048824151,12.4747083806247,24.1929094402776,6.48988557036784,108.844751068232,9.70018279427146,9.4449208958553,40.1224813419992,61.6490967021823,84.1903677400003,197.51493565286,206.848246534367,189.886764007278,24.821436068393,0.316335993581135,2.23651413839534,2.05210147561422,1.88179466413022,2.62035076495413,1.48350781023303,8.84391976261094,8.11443420150492,13.0911123024711,36.6590194721286,2.81846469342095,0.598066184175915,0.992750942742586,1.75006069509643,3.48731523389874,2.53434188236167,1.87771581833206,1.8228613878153,1.99232754408851,2.65742532908607,2.59227005632079,81.53086912207,27.5706292794623,39.9545623371178,36.2479096108048,32.5828586114816,37.1534133440965,37.0201984521504,30.7194216523121,28.068673085585,35.1313378679549,36.1966004641257,43.2712990484501,35.5021695652816,49.4389296228037,9.9761368790693,2.21985953374065,0.986852422704233,0.335769232728157,23.9555096599916,20.0820248732765,15.9341913112521,12.0046292284277,20.5644562654499,7.90652579663893,7.36520378411483,12.6037012956667,7.56154002312225,5.48066015816514,4.5323633843382,6.75022500231806,9.00642406448441,4.98456649882625,8.28416498802912,0.103787347584177,0.798049746802062,2.39027048055788,2.18796045361465,1.67690530102386,1.2869045591501,2.00022055021454,2.26638562962784,2.24643446714271,2.02157769411038,2.28131369901216,3.77252682772152,2.06011316433741,2.94515701062399,3.33125719942557,4.28664322154766,2.0859178670074,2.50781986602817,1.64834360321323,2.35518272215036,1.37147700954166,2.8396128985494,2.38436189947321,2.0348498328526,2.4468438907986,1.94613598150856,1.82927972872773,1.05227884575137,3.25929873230068,3.36685362994643,1.89816028998679,2.1670986122624,3.27384834535751,1.23949472948773,3.47231899766054,3.99696924700713,4.21076895201735,3.86767897286937,3.63447830930802,12.1325280515734,9.27471342481686
|short_description=p1@H2-DMa
|short_description=p1@H2-DMa
}}
}}

Latest revision as of 07:35, 26 September 2015

Short description:p1@H2-DMa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_H2-DMa_5end
Coexpression cluster:MCL_coexpression_mm9:1643
Association with transcript: 0bp_to_NM_010386_5end
EntrezGene:H2-DMa
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@H2-DMa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.27
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I359.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I455.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.55
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E430.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A154.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A381.80
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A533.58
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2460.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4389.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6391.29
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H268.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I975.23
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D166.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D267.45
GP2+ M cell, pool1.CNhs13228.11845-124H932.73
GP2+ M cell, pool2.CNhs13231.11846-124I129.72
GP2+ M cell, pool3.CNhs13240.11847-124I225.64
Ileum epithelium, pool1.CNhs13199.10252-104B9159.62
Ileum epithelium, pool2.CNhs13232.10253-104C1180.20
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C845.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F570.48
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F683.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F767.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H160.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H322.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H424.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2493.78
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.61
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C763.89
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7121.63
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2103.02
Mouse Microglia, donor1.CNhs12629.11718-123C816.18
Mouse Microglia, donor2.CNhs12634.11736-123E819.21
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.23
accessory axillary lymph node, adult.CNhs10475.1063-29H9279.14
adrenal gland, adult.CNhs10508.49-24D738.30
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H131.81
bone (os femoris), adult.CNhs10483.56-12G251.31
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H7158.38
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7184.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1182.37
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4188.70
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A223.26
epididymis, adult.CNhs10490.58-23B233.11
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8136.23
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2118.38
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D594.91
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D37.46
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I3194.29
intestine, adult.CNhs10496.178-9A315.07
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D119.93
intestine, neonate N01.CNhs11192.1322-23E98.56
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F213.93
intestine, neonate N10.CNhs11098.755-23A515.40
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E320.53
intestine, neonate N30.CNhs11131.1384-42G119.12
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D57.46
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H111.11
liver, adult pregnant day01.CNhs10466.508-5B214.23
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F48.27
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H224.56
liver, neonate N10.CNhs11115.751-24B917.47
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H16.82
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B1108.08
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E519.23
lung, neonate N07.CNhs11111.715-19A321.48
lung, neonate N10.CNhs11219.750-23E623.92
lung, neonate N20.CNhs11109.822-18A452.44
lung, neonate N25.CNhs11119.1359-25C762.17
lung, neonate N30.CNhs11133.1394-42H252.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1107.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A197.36
mammary gland, adult lactating day02.CNhs10480.595-22B627.05
mammary gland, adult pregnant day19.CNhs10476.588-5H233.66
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I716.89
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G622.93
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C333.31
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H35.13
skin, neonate N06.CNhs11097.693-20I59.19
skin, neonate N10.CNhs11108.762-6C412.47
small intestine, neonate N16.CNhs11114.790-21I124.19
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G2108.84
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D140.12
spleen, neonate N20.CNhs11112.824-19H161.65
spleen, neonate N25.CNhs11099.1354-25G384.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6197.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9206.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3189.89
stomach, adult.CNhs10503.33-1H624.82
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I113.09
submandibular gland, adult.CNhs10469.59-29C136.66
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B581.53
thymus, embryo E14.CNhs11041.402-44I427.57
thymus, embryo E15.CNhs11005.430-45I239.95
thymus, embryo E16.CNhs11002.456-26C536.25
thymus, embryo E17.CNhs10581.478-18C132.58
thymus, embryo E18.CNhs10595.1273-19G437.15
thymus, neonate N02.CNhs11181.1541-43F837.02
thymus, neonate N03.CNhs11137.2104-43C730.72
thymus, neonate N06.CNhs11197.681-26C428.07
thymus, neonate N07.CNhs11211.713-19D335.13
thymus, neonate N10.CNhs11194.748-24E436.20
thymus, neonate N20.CNhs11186.820-7A243.27
thymus, neonate N25.CNhs11125.1362-25G735.50
thymus, neonate N30.CNhs11132.1393-42G249.44
tongue, adult.CNhs10499.32-1B49.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E423.96
uterus, adult pregnant day19.CNhs10497.590-15F520.08
uterus, adult.CNhs10509.92-27E515.93
vagina, adult.CNhs10502.89-27D512.00
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
hemolymphoid system3.60e-1448
immune system3.60e-1448
hematopoietic system1.57e-1245
blood island1.57e-1245
bone element8.37e-1022
skeletal element8.37e-1022
skeletal system8.37e-1022
bone marrow1.51e-0916
adult organism9.44e-0951
digestive system1.04e-08116
digestive tract1.04e-08116
primitive gut1.04e-08116
endoderm-derived structure4.22e-08118
endoderm4.22e-08118
presumptive endoderm4.22e-08118
subdivision of digestive tract5.38e-08114
mucosa2.66e-0715