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FFCP PHASE1:Mm9::chr9:119249107..119249153,-: Difference between revisions

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{{FFCP|EntrezGene=17874|HGNC=|MCL_coexpression_id=116|UniProt=E9PVR7|association_with_transcript=0bp_to_ENSMUST00000150837,ENSMUST00000167535_5end|description=CAGE_peak_1_at_Myd88_5end|id=chr9:119249107..119249153,-|ontology_enrichment_celltype=CL:0000063!7.45e-16!66;CL:0002320!4.97e-15!46;CL:0000134!4.97e-15!46;CL:0000219!1.60e-14!54;CL:0000988!9.85e-12!32;CL:0002032!9.85e-12!32;CL:0000037!9.85e-12!32;CL:0000566!9.85e-12!32;CL:0000837!9.85e-12!32;CL:0002031!4.25e-10!25;CL:0000738!6.40e-08!17;CL:0002087!6.40e-08!17;CL:0000049!2.76e-07!19|ontology_enrichment_celltype_v019_2=CL:0002320,4.97e-15,46;CL:0000134,4.97e-15,46;CL:0000219,1.60e-14,54;CL:0000988,9.85e-12,32;CL:0002032,9.85e-12,32;CL:0000037,9.85e-12,32;CL:0000837,9.85e-12,32;CL:0002031,4.25e-10,25;CL:0000738,6.40e-08,17;CL:0002087,6.40e-08,17;CL:0000049,2.76e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.97e-15!46;UBERON:0002204!1.69e-10!32;UBERON:0002193!1.45e-09!48;UBERON:0004119!7.05e-09!130;UBERON:0000925!7.05e-09!130;UBERON:0006595!7.05e-09!130;UBERON:0002390!1.40e-08!45;UBERON:0003061!1.40e-08!45;UBERON:0002371!1.92e-08!16;UBERON:0002405!2.17e-08!70;UBERON:0001007!2.42e-08!128;UBERON:0001555!2.42e-08!128;UBERON:0007026!2.42e-08!128;UBERON:0004921!6.88e-08!126;UBERON:0004185!6.88e-08!126;UBERON:0004923!3.26e-07!24;UBERON:0003081!5.09e-07!88;UBERON:0001474!9.12e-07!22;UBERON:0004765!9.12e-07!22;UBERON:0001434!9.12e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.97e-15,46;UBERON:0004119,1.10e-10,118;UBERON:0000925,1.10e-10,118;UBERON:0006595,1.10e-10,118;UBERON:0002204,1.69e-10,32;UBERON:0001007,4.27e-10,116;UBERON:0001555,4.27e-10,116;UBERON:0007026,4.27e-10,116;UBERON:0004921,1.35e-09,114;UBERON:0002193,1.45e-09,48;UBERON:0002405,1.45e-09,48;UBERON:0002390,1.40e-08,45;UBERON:0003061,1.40e-08,45;UBERON:0002371,1.92e-08,16;UBERON:0004923,3.26e-07,24;UBERON:0005409,4.50e-07,47;UBERON:0001474,9.12e-07,22;UBERON:0004765,9.12e-07,22;UBERON:0001434,9.12e-07,22|phase1_expression=6.56610273129655,43.9709013625595,42.3149292632269,26.3143863836942,23.041203577532,25.3497700586954,22.4268134971705,34.0885573885761,39.9839970910734,35.577808000943,25.1690413291492,23.9316476986009,46.9090000011504,42.6611563804707,28.3143297543313,23.8920815519995,18.88817070946,41.6410058272874,32.9074640653773,26.3121584114779,12.4163203620562,31.3759405794798,33.9559725880616,26.5587421837055,24.5467930741872,35.6023817751313,35.3224836850441,36.1991670912294,33.4441218243218,25.9591033652729,32.3726545556745,14.6057054895715,12.916360539276,31.6963362030877,18.4865036640816,17.2884031172832,17.9669033510885,215.125258198771,220.336567155712,174.856930487249,216.469187595413,191.935781273323,197.60271368368,27.5714031366514,31.122717884391,35.6080699193662,57.8969594817549,10.6832326626419,21.9686182734472,21.1928589990969,20.2980311356776,10.062679505548,44.1268253931847,45.6978149467147,52.4306326662244,22.3815709351274,32.6648121530183,40.7380952899179,0.809265843438391,1.05798195854407,1.26766280701236,27.1075625655306,32.9039074561122,116.986963246582,136.463558034242,122.913059885675,42.5432156936135,38.0376122268339,0.829516898467821,1.08004750665353,1.89292465216244,3.71346279724945,4.63823935998388,0.367472397644862,0.479227355091182,0,1.10115880999389,1.14918604276669,1.53606533256243,1.05509030184155,1.00636407962651,0,3.62937898701795,2.8138130501584,3.66715794664344,3.24091444021034,2.27794689278565,0.559198337475902,17.265572079966,12.9983083383671,52.7553369437054,22.371020801516,20.3991400112325,21.5881276655127,10.3964226791627,14.3368603871147,17.9768857768642,25.2236877415525,21.5622383820381,26.5004680882755,6.4787973097273,12.8326477414318,25.4805239706646,7.11066703153331,16.0203370348298,14.1881524666055,17.6933555755174,19.5254434319593,42.7247508017833,22.4147629987885,18.5629299639765,18.8768596553528,11.0695438682908,16.2780451796832,15.6392980490487,17.8446559688139,31.1465659345311,19.9547112549478,54.8458542208922,16.6619855445831,18.5506875506731,15.0311328471919,9.31958806090611,2.63502717310392,1.25668024088073,41.6394999990004,28.2763693833972,38.9936775145715,27.447169047782,1.64769703345305,2.28750301409313,1.25654352112864,1.21677024134594,3.06858548796397,2.70124457927428,2.92034273521964,16.5998163076016,26.1254638281195,41.4465323831227,23.7799297151716,2.73252930221678,3.67843367093557,3.96136685571768,5.72678307775717,5.98721192531685,4.74020765053944,5.24729657534481,12.4177617954728,3.88022387279116,4.53854592402766,6.15828934573821,10.5213951565236,9.73165372289593,18.1091126591527,20.1666493679785,5.37392520409932,39.3239384895411,34.7419674604865,37.2254184208226,7.04227626620706,7.03578179943289,6.12211008967451,5.20838418287463,5.70616272067471,9.71882811190483,8.60375595576509,9.12129564758705,8.4071046504362,8.88623189532794,11.6558899496158,12.4845966700618,11.5497990066013,14.4903076092093,15.4337381574428,3.78521907415429,1.74937841044784,38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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17874
|HGNC=
|MCL_coexpression_id=116
|TSSclassifier=NA
|UniProt=E9PVR7
|association_with_transcript=0bp_to_ENSMUST00000150837,ENSMUST00000167535_5end
|cluster_id=chr9:119249107..119249153,-
|description=CAGE_peak_1_at_Myd88_5end
|id=chr9:119249107..119249153,-
|ontology_enrichment_celltype=CL:0000063!7.45e-16!66;CL:0002320!4.97e-15!46;CL:0000134!4.97e-15!46;CL:0000219!1.60e-14!54;CL:0000988!9.85e-12!32;CL:0002032!9.85e-12!32;CL:0000037!9.85e-12!32;CL:0000566!9.85e-12!32;CL:0000837!9.85e-12!32;CL:0002031!4.25e-10!25;CL:0000738!6.40e-08!17;CL:0002087!6.40e-08!17;CL:0000049!2.76e-07!19
|ontology_enrichment_celltype_v019_2=CL:0002320,4.97e-15,46;CL:0000134,4.97e-15,46;CL:0000219,1.60e-14,54;CL:0000988,9.85e-12,32;CL:0002032,9.85e-12,32;CL:0000037,9.85e-12,32;CL:0000837,9.85e-12,32;CL:0002031,4.25e-10,25;CL:0000738,6.40e-08,17;CL:0002087,6.40e-08,17;CL:0000049,2.76e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!4.97e-15!46;UBERON:0002204!1.69e-10!32;UBERON:0002193!1.45e-09!48;UBERON:0004119!7.05e-09!130;UBERON:0000925!7.05e-09!130;UBERON:0006595!7.05e-09!130;UBERON:0002390!1.40e-08!45;UBERON:0003061!1.40e-08!45;UBERON:0002371!1.92e-08!16;UBERON:0002405!2.17e-08!70;UBERON:0001007!2.42e-08!128;UBERON:0001555!2.42e-08!128;UBERON:0007026!2.42e-08!128;UBERON:0004921!6.88e-08!126;UBERON:0004185!6.88e-08!126;UBERON:0004923!3.26e-07!24;UBERON:0003081!5.09e-07!88;UBERON:0001474!9.12e-07!22;UBERON:0004765!9.12e-07!22;UBERON:0001434!9.12e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.97e-15,46;UBERON:0004119,1.10e-10,118;UBERON:0000925,1.10e-10,118;UBERON:0006595,1.10e-10,118;UBERON:0002204,1.69e-10,32;UBERON:0001007,4.27e-10,116;UBERON:0001555,4.27e-10,116;UBERON:0007026,4.27e-10,116;UBERON:0004921,1.35e-09,114;UBERON:0002193,1.45e-09,48;UBERON:0002405,1.45e-09,48;UBERON:0002390,1.40e-08,45;UBERON:0003061,1.40e-08,45;UBERON:0002371,1.92e-08,16;UBERON:0004923,3.26e-07,24;UBERON:0005409,4.50e-07,47;UBERON:0001474,9.12e-07,22;UBERON:0004765,9.12e-07,22;UBERON:0001434,9.12e-07,22
|phase1_expression=6.56610273129655,43.9709013625595,42.3149292632269,26.3143863836942,23.041203577532,25.3497700586954,22.4268134971705,34.0885573885761,39.9839970910734,35.577808000943,25.1690413291492,23.9316476986009,46.9090000011504,42.6611563804707,28.3143297543313,23.8920815519995,18.88817070946,41.6410058272874,32.9074640653773,26.3121584114779,12.4163203620562,31.3759405794798,33.9559725880616,26.5587421837055,24.5467930741872,35.6023817751313,35.3224836850441,36.1991670912294,33.4441218243218,25.9591033652729,32.3726545556745,14.6057054895715,12.916360539276,31.6963362030877,18.4865036640816,17.2884031172832,17.9669033510885,215.125258198771,220.336567155712,174.856930487249,216.469187595413,191.935781273323,197.60271368368,27.5714031366514,31.122717884391,35.6080699193662,57.8969594817549,10.6832326626419,21.9686182734472,21.1928589990969,20.2980311356776,10.062679505548,44.1268253931847,45.6978149467147,52.4306326662244,22.3815709351274,32.6648121530183,40.7380952899179,0.809265843438391,1.05798195854407,1.26766280701236,27.1075625655306,32.9039074561122,116.986963246582,136.463558034242,122.913059885675,42.5432156936135,38.0376122268339,0.829516898467821,1.08004750665353,1.89292465216244,3.71346279724945,4.63823935998388,0.367472397644862,0.479227355091182,0,1.10115880999389,1.14918604276669,1.53606533256243,1.05509030184155,1.00636407962651,0,3.62937898701795,2.8138130501584,3.66715794664344,3.24091444021034,2.27794689278565,0.559198337475902,17.265572079966,12.9983083383671,52.7553369437054,22.371020801516,20.3991400112325,21.5881276655127,10.3964226791627,14.3368603871147,17.9768857768642,25.2236877415525,21.5622383820381,26.5004680882755,6.4787973097273,12.8326477414318,25.4805239706646,7.11066703153331,16.0203370348298,14.1881524666055,17.6933555755174,19.5254434319593,42.7247508017833,22.4147629987885,18.5629299639765,18.8768596553528,11.0695438682908,16.2780451796832,15.6392980490487,17.8446559688139,31.1465659345311,19.9547112549478,54.8458542208922,16.6619855445831,18.5506875506731,15.0311328471919,9.31958806090611,2.63502717310392,1.25668024088073,41.6394999990004,28.2763693833972,38.9936775145715,27.447169047782,1.64769703345305,2.28750301409313,1.25654352112864,1.21677024134594,3.06858548796397,2.70124457927428,2.92034273521964,16.5998163076016,26.1254638281195,41.4465323831227,23.7799297151716,2.73252930221678,3.67843367093557,3.96136685571768,5.72678307775717,5.98721192531685,4.74020765053944,5.24729657534481,12.4177617954728,3.88022387279116,4.53854592402766,6.15828934573821,10.5213951565236,9.73165372289593,18.1091126591527,20.1666493679785,5.37392520409932,39.3239384895411,34.7419674604865,37.2254184208226,7.04227626620706,7.03578179943289,6.12211008967451,5.20838418287463,5.70616272067471,9.71882811190483,8.60375595576509,9.12129564758705,8.4071046504362,8.88623189532794,11.6558899496158,12.4845966700618,11.5497990066013,14.4903076092093,15.4337381574428,3.78521907415429,1.74937841044784,38.3285788261206,31.2051668662982,6.18535926552179,7.89604684325491,12.371276286921,14.117846723634,12.4531704553127,23.2075263857322,25.1500402618591,24.7048432086016,24.1281800448259,21.4872989804443,27.1000081095577,22.4704852163555,23.7751854862164,22.7021051509979,10.2420666514664,7.31190480702264,10.1436962105772,10.386217720111,11.8311017172252,10.1696938840962,11.3193401452421,10.3327103585722,14.9148791449306,15.4246454902251,21.937494404449,11.3454671886944,13.7591296579242,12.1425540687821,10.1430060694251,13.7470981058878,13.7497959961967,16.686375972147,18.6455510791291,17.2973690308491,8.62609239164127,19.3513292787622,13.1055822708115,15.6598904327209,13.6342034276653,16.4030797263545,43.4169996891521,6.06372517665551,10.4297584922897,10.5241953180617,11.9692026627136,21.1057884376688,25.7087132156895,22.0501022079313,21.7536498866544,17.717175171902,20.5696651568158,27.529036872244,33.5008864819837,37.898053348356,81.427293327207,155.557025572151,36.8823204764277,37.8033342437484,2.56880943980467,2.22702204525186,12.7869257393807,15.6531974866711,6.62567260774139,8.98009111882268,7.75524231838076,12.4263774935327,8.68914828921337,6.79383673893198,8.09621403349789,8.47541987942804,7.11518000303742,1.28528526568723,19.7296718439493,17.0942979520565,14.3340524231147,73.0817644768332,10.619611067197,6.31229654002952,7.86041248108353,9.9960692270626,16.5369060013233,15.0643222492524,18.8652654012801,13.4507479906677,13.5469003786194,12.009396801561,8.4334886859999,7.21948802737308,15.3197822589205,3.6012218806262,5.95049945400671,6.85878512101095,10.1083933176096,7.84822797449111,9.87294123612726,13.3964577610424,26.5179030111993,29.444657850071,23.376010193826,27.0413454824027,15.0161916827192,15.6813604813205,18.1445962884767,15.9216672752709,22.4440244204985,2.59595422814714,37.5915937755276,25.7983584954028,26.4828174138688,23.5460571255864,17.9069438314543,28.3684934776088,25.836721359066,25.6111157752294,29.8511943417555,46.7788602827406,7.27572785236611,12.4024874947378,17.38885987231,21.5360944894903,19.2159056096636,19.8250589185686,23.7215417931714,36.6458318777641,24.7564598987324,19.2615187056947,1.69107881605257,5.68162874967119,7.61109056102649,9.72255941720238,10.7202653486517,8.27885014904813,7.62822051197401,7.68205870579306,6.08184197669123,1.20792060413003,5.18454011264158,18.6446561170625,19.2588954525656,16.8445969750317,20.5274900304916,17.3655894797457,14.7024202538136,13.2214994471966,12.8489888641882,10.6014772445555,12.116882258145,10.7884018096419,15.0085136339219,12.3151157299622,14.6096127726961,21.3126560598299,22.8645531975287,20.8136147333984,29.7155770964419,22.0236137196697,36.4104002375293,41.2091154601346,32.1552568618599,17.5550236412377,1.6942555278512,1.38097570952153,2.29158205375759,1.20297227640581,2.05524755931193,0,2.70009000092722,1.80128481289688,4.07828168085784,2.07104124700728,2.49089634202024,5.1873233542134,7.85374586469017,12.1553358534147,8.80375283037526,13.9721066422011,7.55638874525492,10.3017528619447,13.1576875932644,11.3713745293709,11.1530891951705,11.6948331659367,10.5814903440967,11.5885525852813,10.5106908188772,10.0021675169445,10.0819363572024,10.8029163459675,12.3625770240992,11.9231125308862,9.94320831917705,12.0683548188349,12.637118067208,13.2265239135419,10.540250606517,11.3383574574847,10.9756783723664,11.3119975918272,9.09887562767274,16.8342681497322,10.3212465768031,9.75194375518078,10.2307760792422,13.479505183179,11.9602098808308,16.9871192997803,15.9073493742878,19.1235238102985,15.6856432296452,21.397367654593,16.2307484934295
|short_description=p1@Myd88
}}

Latest revision as of 07:49, 26 September 2015

Short description:p1@Myd88
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Myd88_5end
Coexpression cluster:MCL_coexpression_mm9:116
Association with transcript: 0bp_to_ENSMUST00000150837, ENSMUST00000167535_5end
EntrezGene:Myd88
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Myd88

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I543.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I642.31
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.43
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E739.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F235.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E625.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E446.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E842.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.89
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A518.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A241.64
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H231.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I933.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D126.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D224.55
GP2+ M cell, pool1.CNhs13228.11845-124H935.60
GP2+ M cell, pool2.CNhs13231.11846-124I135.32
GP2+ M cell, pool3.CNhs13240.11847-124I236.20
Ileum epithelium, pool1.CNhs13199.10252-104B933.44
Ileum epithelium, pool2.CNhs13232.10253-104C125.96
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C832.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I314.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8215.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1220.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3174.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9216.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2191.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4197.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D931.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B757.90
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.68
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.97
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A244.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I945.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A152.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E132.66
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C540.74
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.11
Mouse Meningeal cells, donor3.CNhs12109.11639-122D132.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7116.99
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7136.46
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2122.91
Mouse Microglia, donor1.CNhs12629.11718-123C842.54
Mouse Microglia, donor2.CNhs12634.11736-123E838.04
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D917.27
Mouse Schwann, donor2.CNhs12573.11746-123F913.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G352.76
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C420.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.59
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.50
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.69
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.53
accessory axillary lymph node, adult.CNhs10475.1063-29H942.72
adrenal gland, adult.CNhs10508.49-24D722.41
adrenal gland, embryo E14.CNhs11038.406-44C518.56
adrenal gland, embryo E16.CNhs11004.1254-43D618.88
adrenal gland, embryo E17.CNhs11043.1263-45I111.07
adrenal gland, embryo E18.CNhs11026.1262-18F516.28
adrenal gland, neonate N00.CNhs11191.1311-23C115.64
adrenal gland, neonate N25.CNhs11223.1377-27I317.84
amnion, adult pregnant day17.5.CNhs10488.583-22A831.15
aorta, adult.CNhs10498.46-23H119.95
bone (os femoris), adult.CNhs10483.56-12G254.85
bone (os femoris), neonate N02.CNhs11227.1985-43F516.66
bone (os femoris), neonate N16.CNhs11225.1525-43A618.55
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H741.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D138.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D427.45
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.13
epididymis, adult.CNhs10490.58-23B241.45
eyeball, adult.CNhs10484.31-12G423.78
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D45.73
eyeball, neonate N00.CNhs11207.633-15C65.99
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G85.25
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E26.16
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C418.11
forelimb, embryo E18.CNhs11008.1520-43B520.17
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C839.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D234.74
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D537.23
heart, embryo E11.CNhs10586.331-24E97.04
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I96.12
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C85.71
heart, embryo E16.CNhs11021.457-17C69.72
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E38.41
heart, neonate N03.CNhs11221.1349-25I28.89
heart, neonate N10.CNhs11118.749-24G111.66
heart, neonate N16.CNhs11209.782-15G112.48
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D314.49
heart, neonate N30.CNhs11202.1390-42D215.43
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I338.33
intestine, adult.CNhs10496.178-9A331.21
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D812.37
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D312.45
intestine, embryo E18.CNhs10526.1289-20F723.21
intestine, neonate N00.CNhs11126.644-26D125.15
intestine, neonate N01.CNhs11192.1322-23E924.70
intestine, neonate N06.CNhs11102.688-20B824.13
intestine, neonate N07.CNhs11095.720-20F221.49
intestine, neonate N10.CNhs11098.755-23A527.10
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E323.78
intestine, neonate N30.CNhs11131.1384-42G122.70
kidney, embryo E14.CNhs10606.411-4I910.24
kidney, embryo E15.CNhs10997.434-16F87.31
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I210.39
kidney, embryo E18.CNhs11001.1288-20C711.83
kidney, neonate N00.CNhs11214.646-21G710.17
kidney, neonate N10.CNhs11206.758-6D511.32
kidney, neonate N20.CNhs11113.832-19I110.33
kidney, neonate N25.CNhs11122.1353-25F314.91
kidney, neonate N30.CNhs11203.1385-42H115.42
liver, adult pregnant day01.CNhs10466.508-5B221.94
liver, embryo E12.CNhs10601.355-15F811.35
liver, embryo E13.CNhs10524.378-3H613.76
liver, embryo E14.CNhs10594.409-16E112.14
liver, embryo E15.CNhs10520.433-16D710.14
liver, embryo E16.CNhs10523.462-17F513.75
liver, embryo E17.CNhs10510.481-18A313.75
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F418.65
liver, neonate N03.CNhs11123.1345-25G217.30
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B913.11
liver, neonate N20.CNhs11220.823-25A315.66
liver, neonate N25.CNhs11198.1368-26H113.63
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B143.42
lung, embryo E12.CNhs10522.354-16G26.06
lung, embryo E14.CNhs10604.404-26F810.43
lung, embryo E15.CNhs11020.432-17C510.52
lung, embryo E16.CNhs10998.458-17B611.97
lung, embryo E17.CNhs10605.480-44A621.11
lung, embryo E18.CNhs10583.1287-20I625.71
lung, neonate N00.CNhs11224.640-42C622.05
lung, neonate N06.CNhs11212.683-20E521.75
lung, neonate N07.CNhs11111.715-19A317.72
lung, neonate N10.CNhs11219.750-23E620.57
lung, neonate N20.CNhs11109.822-18A427.53
lung, neonate N25.CNhs11119.1359-25C733.50
lung, neonate N30.CNhs11133.1394-42H237.90
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A181.43
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1155.56
mammary gland, adult lactating day02.CNhs10480.595-22B636.88
mammary gland, adult pregnant day19.CNhs10476.588-5H237.80
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.65
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I719.73
ovary, embryo E18.CNhs11040.505-44H717.09
ovary, neonate N00.CNhs11217.1299-22I414.33
oviduct, adult pregnant day01.CNhs10500.988-6G673.08
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E510.00
pancreas, embryo E17.CNhs10599.1558-45G316.54
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G918.87
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D813.55
pancreas, neonate N16.CNhs11136.787-43B612.01
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G815.32
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C75.95
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F67.85
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E913.40
placenta, adult pregnant day10.CNhs10472.539-13I726.52
placenta, adult pregnant day17.CNhs10464.577-18G329.44
prostate, adult.CNhs10470.859-1F823.38
skin, adult.CNhs10492.30-1C327.04
skin, neonate N00.CNhs11124.650-25G415.02
skin, neonate N03.CNhs11215.662-22H315.68
skin, neonate N06.CNhs11097.693-20I518.14
skin, neonate N10.CNhs11108.762-6C415.92
small intestine, neonate N16.CNhs11114.790-21I122.44
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G237.59
spleen, embryo E16.CNhs11035.461-43C125.80
spleen, embryo E18.CNhs11011.1271-21F226.48
spleen, neonate N10.CNhs11116.752-24D123.55
spleen, neonate N20.CNhs11112.824-19H117.91
spleen, neonate N25.CNhs11099.1354-25G328.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C625.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.85
stomach, adult.CNhs10503.33-1H646.78
stomach, embryo E12.CNhs10588.356-43E37.28
stomach, embryo E15.CNhs10603.1252-16G812.40
stomach, embryo E16.CNhs11022.459-17D417.39
stomach, embryo E17.CNhs11006.1035-18D521.54
stomach, embryo E18.CNhs10999.1286-20C619.22
stomach, neonate N03.CNhs11193.1340-24B819.83
stomach, neonate N07.CNhs11210.718-18A923.72
stomach, neonate N25.CNhs11104.1355-25E436.65
stomach, neonate N30.CNhs11134.1386-42I124.76
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F55.68
testis, embryo E15.CNhs11034.443-27C57.61
testis, embryo E16.CNhs11033.470-26G59.72
testis, embryo E17.CNhs11029.486-18I510.72
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B77.63
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B518.64
thymus, embryo E14.CNhs11041.402-44I419.26
thymus, embryo E15.CNhs11005.430-45I216.84
thymus, embryo E16.CNhs11002.456-26C520.53
thymus, embryo E17.CNhs10581.478-18C117.37
thymus, embryo E18.CNhs10595.1273-19G414.70
thymus, neonate N02.CNhs11181.1541-43F813.22
thymus, neonate N03.CNhs11137.2104-43C712.85
thymus, neonate N06.CNhs11197.681-26C410.60
thymus, neonate N07.CNhs11211.713-19D312.12
thymus, neonate N10.CNhs11194.748-24E410.79
thymus, neonate N20.CNhs11186.820-7A215.01
thymus, neonate N25.CNhs11125.1362-25G712.32
thymus, neonate N30.CNhs11132.1393-42G214.61
tongue, adult.CNhs10499.32-1B421.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G529.72
urinary bladder, adult.CNhs10481.879-12E422.02
uterus, adult pregnant day19.CNhs10497.590-15F536.41
uterus, adult.CNhs10509.92-27E541.21
vagina, adult.CNhs10502.89-27D532.16
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H27.85
whole body, embryo E14.5.CNhs10578.420-27D212.16
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F213.97
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.75
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.48
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I516.99
whole body, embryo E18.CNhs10516.493-3B315.91
whole body, neonate N00.CNhs10525.657-19C219.12
whole body, neonate N01.CNhs10576.659-23C615.69
whole body, neonate N06.CNhs10515.692-21D121.40
whole body, neonate N10.CNhs10518.761-6B416.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
connective tissue4.97e-1546
endoderm-derived structure1.10e-10118
endoderm1.10e-10118
presumptive endoderm1.10e-10118
musculoskeletal system1.69e-1032
digestive system4.27e-10116
digestive tract4.27e-10116
primitive gut4.27e-10116
subdivision of digestive tract1.35e-09114
hemolymphoid system1.45e-0948
immune system1.45e-0948
hematopoietic system1.40e-0845
blood island1.40e-0845
bone marrow1.92e-0816
organ component layer3.26e-0724
gastrointestinal system4.50e-0747
bone element9.12e-0722
skeletal element9.12e-0722
skeletal system9.12e-0722
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