FFCP PHASE1:Mm9::chr14:70477013..70477029,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13655 | |EntrezGene=13655 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=P43300,Q496R7,Q3ZB14 | |UniProt=P43300,Q496R7,Q3ZB14 | ||
|association_with_transcript=-222bp_to_ENSMUST00000035908,NM_018781,uc007unb.1,uc007unc.1_5end | |association_with_transcript=-222bp_to_ENSMUST00000035908,NM_018781,uc007unb.1,uc007unc.1_5end | ||
|cluster_id=chr14:70477013..70477029,+ | |||
|description=CAGE_peak_4_at_Egr3_5end | |description=CAGE_peak_4_at_Egr3_5end | ||
|id=chr14:70477013..70477029,+ | |id=chr14:70477013..70477029,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,4.99e-07,6;CL:0002489,4.99e-07,6;CL:0000898,4.99e-07,6;CL:0000809,4.99e-07,6;CL:0000810,4.99e-07,6;CL:0000895,4.99e-07,6;CL:0000808,4.99e-07,6;CL:0000894,4.99e-07,6;CL:0000806,4.99e-07,6;CL:0000807,4.99e-07,6;CL:0000805,4.99e-07,6;CL:0002425,4.99e-07,6;CL:0002436,4.99e-07,6;CL:0002427,4.99e-07,6;CL:0002428,4.99e-07,6;CL:0002429,4.99e-07,6;CL:0002433,4.99e-07,6;CL:0002431,4.99e-07,6;CL:0002432,4.99e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!7.40e-09!5;UBERON:0001003!7.40e-09!5;UBERON:0002097!7.40e-09!5;UBERON:0002199!7.40e-09!5;UBERON:0007029!7.40e-09!5;UBERON:0007376!7.40e-09!5;UBERON:0002416!7.40e-09!5;UBERON:0007383!7.40e-09!5;UBERON:0000064!3.59e-08!99;UBERON:0000153!4.67e-08!94;UBERON:0002021!6.82e-08!10;UBERON:0000411!6.82e-08!10;UBERON:0001950!6.82e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.97e-14,10;UBERON:0000411,2.97e-14,10;UBERON:0001950,2.97e-14,10;UBERON:0000029,3.74e-10,1;UBERON:0001097,3.74e-10,1;UBERON:0003968,3.74e-10,1;UBERON:0001467,3.74e-10,1;UBERON:0001851,8.42e-10,1;UBERON:0005889,8.42e-10,1;UBERON:0002619,1.59e-08,17;UBERON:0003528,1.21e-07,29;UBERON:0002791,1.21e-07,29;UBERON:0001893,1.21e-07,29;UBERON:0000956,5.92e-07,21;UBERON:0001869,5.92e-07,21;UBERON:0000203,5.92e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,7.32101355188667,11.9372908424217,0.34243593645101,0.159544317990673,0,0.174840804837995,0,0,0,0.315462165358238,0.822686601634433,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,0.125654352112864,0.521472960576829,1.27857728665165,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,1.31909002353184,0.968786560175433,0.844380948994182,0.596861720015682,0.492422699235184,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0.45032120322422,1.81256963593682,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,7.32101355188667,11.9372908424217,0.34243593645101,0.159544317990673,0,0.174840804837995,0,0,0,0.315462165358238,0.822686601634433,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,0.125654352112864,0.521472960576829,1.27857728665165,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,1.31909002353184,0.968786560175433,0.844380948994182,0.596861720015682,0.492422699235184,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0.45032120322422,1.81256963593682,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p4@Egr3 | |short_description=p4@Egr3 | ||
}} | }} |
Latest revision as of 08:03, 26 September 2015
Short description: | p4@Egr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Egr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -222bp_to_ENSMUST00000035908, NM_018781, uc007unb.1, uc007unc.1_5end |
EntrezGene: | Egr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 4.99e-07 | 6 |
double negative thymocyte | 4.99e-07 | 6 |
naive T cell | 4.99e-07 | 6 |
double-positive, alpha-beta thymocyte | 4.99e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 4.99e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.99e-07 | 6 |
DN4 thymocyte | 4.99e-07 | 6 |
DN1 thymic pro-T cell | 4.99e-07 | 6 |
DN2 thymocyte | 4.99e-07 | 6 |
DN3 thymocyte | 4.99e-07 | 6 |
immature single positive thymocyte | 4.99e-07 | 6 |
early T lineage precursor | 4.99e-07 | 6 |
mature CD4 single-positive thymocyte | 4.99e-07 | 6 |
resting double-positive thymocyte | 4.99e-07 | 6 |
double-positive blast | 4.99e-07 | 6 |
CD69-positive double-positive thymocyte | 4.99e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 4.99e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.99e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 4.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.97e-14 | 10 |
visual cortex | 2.97e-14 | 10 |
neocortex | 2.97e-14 | 10 |
lymph node | 3.74e-10 | 1 |
axillary lymph node | 3.74e-10 | 1 |
peripheral lymph node | 3.74e-10 | 1 |
shoulder | 3.74e-10 | 1 |
cortex | 8.42e-10 | 1 |
zygote cortex | 8.42e-10 | 1 |
regional part of cerebral cortex | 1.59e-08 | 17 |
brain grey matter | 1.21e-07 | 29 |
regional part of telencephalon | 1.21e-07 | 29 |
telencephalon | 1.21e-07 | 29 |
cerebral cortex | 5.92e-07 | 21 |
cerebral hemisphere | 5.92e-07 | 21 |
pallium | 5.92e-07 | 21 |