FFCP PHASE1:Mm9::chr17:34726899..34726910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=106512 | |EntrezGene=106512 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |||
|UniProt=G3UZQ1 | |UniProt=G3UZQ1 | ||
|association_with_transcript=-126bp_to_ENSMUST00000150924_5end | |association_with_transcript=-126bp_to_ENSMUST00000150924_5end | ||
|cluster_id=chr17:34726899..34726910,+ | |||
|description=CAGE_peak_7_at_Gpsm3_5end | |description=CAGE_peak_7_at_Gpsm3_5end | ||
|id=chr17:34726899..34726910,+ | |id=chr17:34726899..34726910,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000878,3.69e-15,2;CL:0000129,3.69e-15,2;CL:0002092,1.14e-10,3;CL:0002540,1.14e-10,3;CL:0000355,4.11e-08,9;CL:0002194,4.78e-08,4;CL:0000766,4.78e-08,4;CL:0000234,4.78e-08,4;CL:0000576,4.78e-08,4;CL:0000235,4.78e-08,4;CL:0000864,4.78e-08,4;CL:0002009,4.78e-08,4;CL:0000040,4.78e-08,4;CL:0000559,4.78e-08,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.98e-23,3;DOID:4045,3.98e-23,3;DOID:0050686,6.82e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.32e-08!45;UBERON:0003061!8.32e-08!45;UBERON:0002193!3.39e-07!48 | |ontology_enrichment_uberon=UBERON:0002390!8.32e-08!45;UBERON:0003061!8.32e-08!45;UBERON:0002193!3.39e-07!48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.12e-14,32;UBERON:0001474,3.46e-08,22;UBERON:0004765,3.46e-08,22;UBERON:0001434,3.46e-08,22;UBERON:0001134,4.11e-08,9;UBERON:0002036,4.11e-08,9;UBERON:0002385,4.11e-08,9;UBERON:0000486,4.11e-08,9;UBERON:0007503,4.11e-08,9;UBERON:0001015,4.11e-08,9;UBERON:0002329,4.11e-08,9;UBERON:0003082,4.11e-08,9;UBERON:0003059,4.11e-08,9;UBERON:0007282,4.11e-08,9;UBERON:0004290,4.11e-08,9;UBERON:0009618,4.11e-08,9;UBERON:0002371,1.72e-07,16;UBERON:0000383,2.37e-07,10;UBERON:0007524,9.96e-07,11;UBERON:0003077,9.96e-07,11;UBERON:0007285,9.96e-07,11 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.786783621770977,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0,0.17008658030214,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7157457823205,21.0960543021426,15.1821885752402,26.4704169613956,28.6879103682547,35.4422557712742,0.125896817975577,0,0,0.782391344348039,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,3.9554654502679,2.8419204597844,2.09720077362883,1.53687322128622,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0.301445281105245,0,0,0.741584903203122,0.289198713839823,1.76922110389975,0,0.883366073841574,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0.420883711772948,0.130120442962704,0.459804208866946,0.540186389416048,0.452114453507145,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0,0.268412837520744,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0.605050573870028,0.667134131534611,0.190225626112559,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.685491075658373,1.1270773567308,0.203651327845314,0.387904974335251,0.98190147846446,0.758838445491087,0.738050739898011,0.941992367048249,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.936113019343682,0.505157755894224,0,0.482443521363367,0.554259570499814,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0.983528546038072,0.551873492609465,0.321101179975584,0,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.63549621259146,0,0.49465875882444,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0.683483523191411,0.619160603889667,0.925972636848558,0.376736914009382,0.27338845544205,0.228778173206523,0.849892149969277,0.419854356970974,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.39061315453185,0.419437377702843,0,0,0.632022241256357,0,0.616265742988964,0.389762468933385,0.179026695667481,0.198681354781265,0.600977247599844,0.738447635872886,0.403865799792591,0.457240839929999,0.100826185136841,0.487289403698762,0.577271049841977,0.350630706544707,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.229741875822453,0,0,0,0,0.294397840268795,0,0,0.238436189947321,0,0,0,0,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0,0,0.644613162144895,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.786783621770977,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0,0.17008658030214,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7157457823205,21.0960543021426,15.1821885752402,26.4704169613956,28.6879103682547,35.4422557712742,0.125896817975577,0,0,0.782391344348039,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,3.9554654502679,2.8419204597844,2.09720077362883,1.53687322128622,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0.301445281105245,0,0,0.741584903203122,0.289198713839823,1.76922110389975,0,0.883366073841574,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0.420883711772948,0.130120442962704,0.459804208866946,0.540186389416048,0.452114453507145,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0,0.268412837520744,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0.605050573870028,0.667134131534611,0.190225626112559,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.685491075658373,1.1270773567308,0.203651327845314,0.387904974335251,0.98190147846446,0.758838445491087,0.738050739898011,0.941992367048249,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.936113019343682,0.505157755894224,0,0.482443521363367,0.554259570499814,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0.983528546038072,0.551873492609465,0.321101179975584,0,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.63549621259146,0,0.49465875882444,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0.683483523191411,0.619160603889667,0.925972636848558,0.376736914009382,0.27338845544205,0.228778173206523,0.849892149969277,0.419854356970974,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.39061315453185,0.419437377702843,0,0,0.632022241256357,0,0.616265742988964,0.389762468933385,0.179026695667481,0.198681354781265,0.600977247599844,0.738447635872886,0.403865799792591,0.457240839929999,0.100826185136841,0.487289403698762,0.577271049841977,0.350630706544707,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.229741875822453,0,0,0,0,0.294397840268795,0,0,0.238436189947321,0,0,0,0,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0,0,0.644613162144895,0,0.220591419119515,0.231867835620421 | ||
|short_description=p7@Gpsm3 | |short_description=p7@Gpsm3 | ||
}} | }} |
Latest revision as of 08:20, 26 September 2015
Short description: | p7@Gpsm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gpsm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -126bp_to_ENSMUST00000150924_5end |
EntrezGene: | Gpsm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 3.69e-15 | 2 |
microglial cell | 3.69e-15 | 2 |
bone marrow cell | 1.14e-10 | 3 |
mesenchymal stem cell of the bone marrow | 1.14e-10 | 3 |
multi-potent skeletal muscle stem cell | 4.11e-08 | 9 |
monopoietic cell | 4.78e-08 | 4 |
myeloid leukocyte | 4.78e-08 | 4 |
phagocyte | 4.78e-08 | 4 |
monocyte | 4.78e-08 | 4 |
macrophage | 4.78e-08 | 4 |
tissue-resident macrophage | 4.78e-08 | 4 |
macrophage dendritic cell progenitor | 4.78e-08 | 4 |
monoblast | 4.78e-08 | 4 |
promonocyte | 4.78e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.12e-14 | 32 |
bone element | 3.46e-08 | 22 |
skeletal element | 3.46e-08 | 22 |
skeletal system | 3.46e-08 | 22 |
skeletal muscle tissue | 4.11e-08 | 9 |
striated muscle tissue | 4.11e-08 | 9 |
muscle tissue | 4.11e-08 | 9 |
multilaminar epithelium | 4.11e-08 | 9 |
epithelial vesicle | 4.11e-08 | 9 |
musculature | 4.11e-08 | 9 |
somite | 4.11e-08 | 9 |
myotome | 4.11e-08 | 9 |
presomitic mesoderm | 4.11e-08 | 9 |
presumptive segmental plate | 4.11e-08 | 9 |
dermomyotome | 4.11e-08 | 9 |
trunk paraxial mesoderm | 4.11e-08 | 9 |
bone marrow | 1.72e-07 | 16 |
musculature of body | 2.37e-07 | 10 |
dense mesenchyme tissue | 9.96e-07 | 11 |
paraxial mesoderm | 9.96e-07 | 11 |
presumptive paraxial mesoderm | 9.96e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.98e-23 | 3 |
muscle cancer | 3.98e-23 | 3 |
organ system cancer | 6.82e-12 | 6 |