FFCP PHASE1:Mm9::chr17:34726899..34726910,+: Difference between revisions
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|id=chr17:34726899..34726910,+
|short_description=p7@Gpsm3
|description=CAGE_peak_7_at_Gpsm3_5end
|association_with_transcript=-126bp_to_ENSMUST00000150924_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=106512 | |EntrezGene=106512 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=G3UZQ1 | |UniProt=G3UZQ1 | ||
|association_with_transcript=-126bp_to_ENSMUST00000150924_5end | |||
|cluster_id=chr17:34726899..34726910,+ | |||
|description=CAGE_peak_7_at_Gpsm3_5end | |||
|id=chr17:34726899..34726910,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,3.69e-15,2;CL:0000129,3.69e-15,2;CL:0002092,1.14e-10,3;CL:0002540,1.14e-10,3;CL:0000355,4.11e-08,9;CL:0002194,4.78e-08,4;CL:0000766,4.78e-08,4;CL:0000234,4.78e-08,4;CL:0000576,4.78e-08,4;CL:0000235,4.78e-08,4;CL:0000864,4.78e-08,4;CL:0002009,4.78e-08,4;CL:0000040,4.78e-08,4;CL:0000559,4.78e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.98e-23,3;DOID:4045,3.98e-23,3;DOID:0050686,6.82e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.32e-08!45;UBERON:0003061!8.32e-08!45;UBERON:0002193!3.39e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.12e-14,32;UBERON:0001474,3.46e-08,22;UBERON:0004765,3.46e-08,22;UBERON:0001434,3.46e-08,22;UBERON:0001134,4.11e-08,9;UBERON:0002036,4.11e-08,9;UBERON:0002385,4.11e-08,9;UBERON:0000486,4.11e-08,9;UBERON:0007503,4.11e-08,9;UBERON:0001015,4.11e-08,9;UBERON:0002329,4.11e-08,9;UBERON:0003082,4.11e-08,9;UBERON:0003059,4.11e-08,9;UBERON:0007282,4.11e-08,9;UBERON:0004290,4.11e-08,9;UBERON:0009618,4.11e-08,9;UBERON:0002371,1.72e-07,16;UBERON:0000383,2.37e-07,10;UBERON:0007524,9.96e-07,11;UBERON:0003077,9.96e-07,11;UBERON:0007285,9.96e-07,11 | |||
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| ||
|short_description=p7@Gpsm3 | |||
}} | }} |
Latest revision as of 08:20, 26 September 2015
Short description: | p7@Gpsm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gpsm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -126bp_to_ENSMUST00000150924_5end |
EntrezGene: | Gpsm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 3.69e-15 | 2 |
microglial cell | 3.69e-15 | 2 |
bone marrow cell | 1.14e-10 | 3 |
mesenchymal stem cell of the bone marrow | 1.14e-10 | 3 |
multi-potent skeletal muscle stem cell | 4.11e-08 | 9 |
monopoietic cell | 4.78e-08 | 4 |
myeloid leukocyte | 4.78e-08 | 4 |
phagocyte | 4.78e-08 | 4 |
monocyte | 4.78e-08 | 4 |
macrophage | 4.78e-08 | 4 |
tissue-resident macrophage | 4.78e-08 | 4 |
macrophage dendritic cell progenitor | 4.78e-08 | 4 |
monoblast | 4.78e-08 | 4 |
promonocyte | 4.78e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.12e-14 | 32 |
bone element | 3.46e-08 | 22 |
skeletal element | 3.46e-08 | 22 |
skeletal system | 3.46e-08 | 22 |
skeletal muscle tissue | 4.11e-08 | 9 |
striated muscle tissue | 4.11e-08 | 9 |
muscle tissue | 4.11e-08 | 9 |
multilaminar epithelium | 4.11e-08 | 9 |
epithelial vesicle | 4.11e-08 | 9 |
musculature | 4.11e-08 | 9 |
somite | 4.11e-08 | 9 |
myotome | 4.11e-08 | 9 |
presomitic mesoderm | 4.11e-08 | 9 |
presumptive segmental plate | 4.11e-08 | 9 |
dermomyotome | 4.11e-08 | 9 |
trunk paraxial mesoderm | 4.11e-08 | 9 |
bone marrow | 1.72e-07 | 16 |
musculature of body | 2.37e-07 | 10 |
dense mesenchyme tissue | 9.96e-07 | 11 |
paraxial mesoderm | 9.96e-07 | 11 |
presumptive paraxial mesoderm | 9.96e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.98e-23 | 3 |
muscle cancer | 3.98e-23 | 3 |
organ system cancer | 6.82e-12 | 6 |